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The map label for this gene is yadH [H]

Identifier: 119897104

GI number: 119897104

Start: 869394

End: 870194

Strand: Direct

Name: yadH [H]

Synonym: azo0813

Alternate gene names: 119897104

Gene position: 869394-870194 (Clockwise)

Preceding gene: 119897103

Following gene: 119897105

Centisome position: 19.87

GC content: 62.92

Gene sequence:

>801_bases
ATGCCTGAGCCCCATGTCGAGGTGCAGGCGGGAGCGGTGTCGCCGCTGACCGGCTTTCGCACGCTGCTGTACAAGGAAGT
GCTGCGCTTCTGGAAGGTGAGCTTCCAGACCGTGATGGCGCCAGTGCTGAACGCGGTGCTGTTCCTGCTGATCTTTTCCC
ACGTGCTGGACCGCCACGTCACCGTGTATGGCGAGATCGGCTATACCGCCTTCCTGGTGCCCGGCCTGGTGATGATGTCG
CTGCTGCAGAACGCCTTCGCCAACAGTTCGTCGTCGCTGATCCAGAGCAAGATCACCGGCAACATCATCTTCGTGCTGCT
GCCGCCGCTGTCCTACCGCGAGTTCTATGCCGCCTACGTCATCGCCGCGGTACTGCGCGGTCTGTTCGTCGGCACCGGGG
TGCTGCTGGTGTCGATTCCCTTCGTCGATCTGCACGTGGCGCACCCGCTGTGGGTGCTGGCCTTCGCGCTGATGGGCGGG
GCGATCCTGGGATCGCTCGGGGTCATCGCCGGCATCTGGGCCGAGAAGTTCGACCAGCTCGCGGCCTTCCAGAACTTCCT
GATCATGCCGCTGACGATGCTGTCCGGCGTGTTCTACTCGATCCACTCGCTGCCGCCGCTCTGGCAGGATGTGTCACACG
TCAACCCGTTCTTCTTTATGATTGACGGCTTCCGTTACGGCTTTTTCGGTCAGTCCGACGTGTCGCCCTGGTTGTCCTTC
GGGGTGGTCGGGCTCTGTTTCGTATTGTTGGCGGCGCTGACGCTCGCGATGCTCGCCCGCGGCTACAAGCTGCGTGGGTG
A

Upstream 100 bases:

>100_bases
GAGCAACTGCTGGCGCGCCTGCGCGAGGCCCAGGCCAGCATCCTCGAGCTGCAACTCGGCGAGCCCGACCTGGAGCGCGT
GTTCGTGGAGGTGATGCACC

Downstream 100 bases:

>100_bases
GCGCGGGCGGGTGCCCTGAGAGGAAATCATGTTCGACCCAAACGAAGTCAAGCGCCTCATCGAGCAGGGCCTGCCCTGTG
AATTCGTCGCCATCGAAGGC

Product: ABC-2 type transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPEPHVEVQAGAVSPLTGFRTLLYKEVLRFWKVSFQTVMAPVLNAVLFLLIFSHVLDRHVTVYGEIGYTAFLVPGLVMMS
LLQNAFANSSSSLIQSKITGNIIFVLLPPLSYREFYAAYVIAAVLRGLFVGTGVLLVSIPFVDLHVAHPLWVLAFALMGG
AILGSLGVIAGIWAEKFDQLAAFQNFLIMPLTMLSGVFYSIHSLPPLWQDVSHVNPFFFMIDGFRYGFFGQSDVSPWLSF
GVVGLCFVLLAALTLAMLARGYKLRG

Sequences:

>Translated_266_residues
MPEPHVEVQAGAVSPLTGFRTLLYKEVLRFWKVSFQTVMAPVLNAVLFLLIFSHVLDRHVTVYGEIGYTAFLVPGLVMMS
LLQNAFANSSSSLIQSKITGNIIFVLLPPLSYREFYAAYVIAAVLRGLFVGTGVLLVSIPFVDLHVAHPLWVLAFALMGG
AILGSLGVIAGIWAEKFDQLAAFQNFLIMPLTMLSGVFYSIHSLPPLWQDVSHVNPFFFMIDGFRYGFFGQSDVSPWLSF
GVVGLCFVLLAALTLAMLARGYKLRG
>Mature_265_residues
PEPHVEVQAGAVSPLTGFRTLLYKEVLRFWKVSFQTVMAPVLNAVLFLLIFSHVLDRHVTVYGEIGYTAFLVPGLVMMSL
LQNAFANSSSSLIQSKITGNIIFVLLPPLSYREFYAAYVIAAVLRGLFVGTGVLLVSIPFVDLHVAHPLWVLAFALMGGA
ILGSLGVIAGIWAEKFDQLAAFQNFLIMPLTMLSGVFYSIHSLPPLWQDVSHVNPFFFMIDGFRYGFFGQSDVSPWLSFG
VVGLCFVLLAALTLAMLARGYKLRG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=247, Percent_Identity=38.8663967611336, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29271; Mature: 29140

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PEPHVEVQAGAVSPLTGFRTLLYKEVLRFWKVSFQTVMAPVLNAVLFLLIFSHVLDRHV
CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TVYGEIGYTAFLVPGLVMMSLLQNAFANSSSSLIQSKITGNIIFVLLPPLSYREFYAAYV
EEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH
IAAVLRGLFVGTGVLLVSIPFVDLHVAHPLWVLAFALMGGAILGSLGVIAGIWAEKFDQL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFQNFLIMPLTMLSGVFYSIHSLPPLWQDVSHVNPFFFMIDGFRYGFFGQSDVSPWLSF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHEEEECCEECCCCCCCCHHHHHH
GVVGLCFVLLAALTLAMLARGYKLRG
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]