| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is nudG [C]
Identifier: 119897019
GI number: 119897019
Start: 780242
End: 781198
Strand: Direct
Name: nudG [C]
Synonym: azo0728
Alternate gene names: 119897019
Gene position: 780242-781198 (Clockwise)
Preceding gene: 119897018
Following gene: 119897031
Centisome position: 17.83
GC content: 70.64
Gene sequence:
>957_bases ATGGCTGAGGTGGGCGCCCGCAAGATCGTCAATGTCGCGGCCGGGGTCATCCTGGAGCGCGGACGGGTGTTGCTCGGGCA GCGCGCACCCGACACCTTCTATCCCGGCTACTGGGAATTCCCCGGAGGCAAGGTCGAACCTGGCGAATCCGCGGCAGATG CGCTCAAGCGCGAGCTGGCCGAGGAGCTAGGCATCGTGGTGCCGCACGTGCGGCCCTGGCTGACCCGCGAGCACGACTAC GAACACGCTCACGTCCGCTTGCACTTCTTCGAGGTTCCGGCGTGGTCGGGAGCGCCGGTGGCGCACGTGCATGCGGCGCT GCGCTGGGCCGAGCCGGAGCTGATTGCGACCGCGTGCGCGCCGATGCTGCCCGCCAACGGCCCGATCCTGAAGGCGCTGC AACTGCCGCGCCGGATGGGTATCACGCAGGCCGCCGAACGGGGCGTGGCGCGTCAGCTGGACGAGCTTGAGCAGGCCCTG GGCGCGGGCCTGCGCCTGGTGCAGGTGCGCGAAGCGGCGCTGCCTCGCCGGCAGCAGATCGAATTCGCACAGGAAGTGGT GCGCCGCGTAGCCGCGGCCGGTGGAATCGTGGTCATCAATGGCGACCTCGATCTTGCCCGTGCAGTGGGTGCGCCCGGGG TGCACCTTCCGTCAGCGGCACTCCTTGATTGCACGGTCCGCCCCGCGTTCGAGTGGGTCGGAGCGTCTTGCCACTCGGAA GAGGAGCTGCGGGCGGCGGCGGCCCTGGGGCTGGACTACGCCGTGCTCGGGCCGGTGCGGCCCACGGCATCCCATCCTGG CCAGGCTGCGCTCGGCTGGGCGCGCTTTGGCGAGTTGGCAGGCACGCTGCCATTTCCGGTCTTTGCGCTCGGTGGTCTCG GCTGGGGCGACATGGATTGCGCCCGCGACCATGGGGCGCATGGTGTTGCGGCGATCCGCGGGGCGTGGGGCGCTTAG
Upstream 100 bases:
>100_bases GCGGCGGCACGCCAGGAAGCGCTGCAGTGGGCGCTGATGCGTGGCGCACGCTCTGGGCGGGTTGCGTGGCAGTTCGCGCG GGACTACGCGGGCCGGGAGG
Downstream 100 bases:
>100_bases CGTCCGGAGCCGGTTTCGGCCGCGTCAGTGTCGTCGGGGGGCGAGGTCGGAACCTTGTATTCCTCGCTCGCCCATGCACC GAGGTCGATCTGGCGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAEVGARKIVNVAAGVILERGRVLLGQRAPDTFYPGYWEFPGGKVEPGESAADALKRELAEELGIVVPHVRPWLTREHDY EHAHVRLHFFEVPAWSGAPVAHVHAALRWAEPELIATACAPMLPANGPILKALQLPRRMGITQAAERGVARQLDELEQAL GAGLRLVQVREAALPRRQQIEFAQEVVRRVAAAGGIVVINGDLDLARAVGAPGVHLPSAALLDCTVRPAFEWVGASCHSE EELRAAAALGLDYAVLGPVRPTASHPGQAALGWARFGELAGTLPFPVFALGGLGWGDMDCARDHGAHGVAAIRGAWGA
Sequences:
>Translated_318_residues MAEVGARKIVNVAAGVILERGRVLLGQRAPDTFYPGYWEFPGGKVEPGESAADALKRELAEELGIVVPHVRPWLTREHDY EHAHVRLHFFEVPAWSGAPVAHVHAALRWAEPELIATACAPMLPANGPILKALQLPRRMGITQAAERGVARQLDELEQAL GAGLRLVQVREAALPRRQQIEFAQEVVRRVAAAGGIVVINGDLDLARAVGAPGVHLPSAALLDCTVRPAFEWVGASCHSE EELRAAAALGLDYAVLGPVRPTASHPGQAALGWARFGELAGTLPFPVFALGGLGWGDMDCARDHGAHGVAAIRGAWGA >Mature_317_residues AEVGARKIVNVAAGVILERGRVLLGQRAPDTFYPGYWEFPGGKVEPGESAADALKRELAEELGIVVPHVRPWLTREHDYE HAHVRLHFFEVPAWSGAPVAHVHAALRWAEPELIATACAPMLPANGPILKALQLPRRMGITQAAERGVARQLDELEQALG AGLRLVQVREAALPRRQQIEFAQEVVRRVAAAGGIVVINGDLDLARAVGAPGVHLPSAALLDCTVRPAFEWVGASCHSEE ELRAAAALGLDYAVLGPVRPTASHPGQAALGWARFGELAGTLPFPVFALGGLGWGDMDCARDHGAHGVAAIRGAWGA
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1788056, Length=126, Percent_Identity=39.6825396825397, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786288, Length=128, Percent_Identity=32.03125, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: 3.6.1.-; 2.5.1.3
Molecular weight: Translated: 33828; Mature: 33697
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00893 NUDIX ; PS00304 SASP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVGARKIVNVAAGVILERGRVLLGQRAPDTFYPGYWEFPGGKVEPGESAADALKRELA CCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHH EELGIVVPHVRPWLTREHDYEHAHVRLHFFEVPAWSGAPVAHVHAALRWAEPELIATACA HHHCEECCCCCHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH PMLPANGPILKALQLPRRMGITQAAERGVARQLDELEQALGAGLRLVQVREAALPRRQQI HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCHHHHH EFAQEVVRRVAAAGGIVVINGDLDLARAVGAPGVHLPSAALLDCTVRPAFEWVGASCHSE HHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCH EELRAAAALGLDYAVLGPVRPTASHPGQAALGWARFGELAGTLPFPVFALGGLGWGDMDC HHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHH ARDHGAHGVAAIRGAWGA HHHCCCCCHHHHCCCCCC >Mature Secondary Structure AEVGARKIVNVAAGVILERGRVLLGQRAPDTFYPGYWEFPGGKVEPGESAADALKRELA CCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHH EELGIVVPHVRPWLTREHDYEHAHVRLHFFEVPAWSGAPVAHVHAALRWAEPELIATACA HHHCEECCCCCHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHH PMLPANGPILKALQLPRRMGITQAAERGVARQLDELEQALGAGLRLVQVREAALPRRQQI HCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHCCHHHHH EFAQEVVRRVAAAGGIVVINGDLDLARAVGAPGVHLPSAALLDCTVRPAFEWVGASCHSE HHHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCH EELRAAAALGLDYAVLGPVRPTASHPGQAALGWARFGELAGTLPFPVFALGGLGWGDMDC HHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHH ARDHGAHGVAAIRGAWGA HHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]