| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
Click here to switch to the map view.
The map label for this gene is creB [H]
Identifier: 119896995
GI number: 119896995
Start: 751848
End: 752555
Strand: Reverse
Name: creB [H]
Synonym: azo0704
Alternate gene names: 119896995
Gene position: 752555-751848 (Counterclockwise)
Preceding gene: 119896996
Following gene: 119896994
Centisome position: 17.2
GC content: 73.87
Gene sequence:
>708_bases ATGTCCCGGCGCATCCTGATCGTCGATGACGAACCGGCGATCGCCGACATGCTCGCCTACGCGCTGCGCACCGAGGGCTA CGAACCCGACTGCGTCGGCCTTGGCGGCGACGCGCTGGCGGCGCTGCGCGGCGGCGCCGACTACGCGCTCGTGATCCTCG ACGTCGGCCTGCCCGACCAGTCCGGCTTCGACGTCTGCCGCGCGCTGCGGCGCGAATCCGACGTGCCGGTGATTTTCCTC ACCGCGCGCAGCGACGAGGTGGACCGCATCGTCGGCCTCGAACTCGGCGCCGACGACTACGTGCCCAAGCCGTTCAGCCC GCGCGAGGTCGCCTCGCGGGTGCGCGCCATCCTGCGCCGCGCGCGGCCGCAGCCGGCGGCTGTCGCGCCGGCGCCGGCGG CGGAAACCTGCAGCGCGCCCTTCCACCACGATGCCGCCGGCGCCCGCATCGCCTACCACGGCGTGTGGCTGTCGCTGACG CGCTACGAATACCGCCTGCTCGCCACCCTGCTCGACCGCCCCGGCCGGGTGCAGAGCCGCGCCCAGCTGATGGCCGACGT CTGGCGCGACGCCGAGGACAGCCTGGAGCGCACGGTGGACGCCCACATCAAGACCCTGCGCGCCAAGCTGCGCGCGGTGC GCGAGGACGAAGACCCGATCGAGACCCACCGCGGCCTGGGCTACAGCCTGCGCCCGGCGCAACGCTGA
Upstream 100 bases:
>100_bases TCGGGGGCTCGGTGATGATCACCGCGCTCACCGACTCCGGCGGCTTCTTCATCTTCCTCGGCCTTGCCACGCTGTTCCTG CTGTGAGCGGCGCGGCAGCA
Downstream 100 bases:
>100_bases ATTCCGCACCGCAGGCGCCGCCGATGAACATCGCGATCCGCTTCTTCATCGGCTATTTCCTGATCGTCGGGCTCGCGGCC TGGTTCGTGCTCAACATCTT
Product: DNA-binding response regulator CreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSRRILIVDDEPAIADMLAYALRTEGYEPDCVGLGGDALAALRGGADYALVILDVGLPDQSGFDVCRALRRESDVPVIFL TARSDEVDRIVGLELGADDYVPKPFSPREVASRVRAILRRARPQPAAVAPAPAAETCSAPFHHDAAGARIAYHGVWLSLT RYEYRLLATLLDRPGRVQSRAQLMADVWRDAEDSLERTVDAHIKTLRAKLRAVREDEDPIETHRGLGYSLRPAQR
Sequences:
>Translated_235_residues MSRRILIVDDEPAIADMLAYALRTEGYEPDCVGLGGDALAALRGGADYALVILDVGLPDQSGFDVCRALRRESDVPVIFL TARSDEVDRIVGLELGADDYVPKPFSPREVASRVRAILRRARPQPAAVAPAPAAETCSAPFHHDAAGARIAYHGVWLSLT RYEYRLLATLLDRPGRVQSRAQLMADVWRDAEDSLERTVDAHIKTLRAKLRAVREDEDPIETHRGLGYSLRPAQR >Mature_234_residues SRRILIVDDEPAIADMLAYALRTEGYEPDCVGLGGDALAALRGGADYALVILDVGLPDQSGFDVCRALRRESDVPVIFLT ARSDEVDRIVGLELGADDYVPKPFSPREVASRVRAILRRARPQPAAVAPAPAAETCSAPFHHDAAGARIAYHGVWLSLTR YEYRLLATLLDRPGRVQSRAQLMADVWRDAEDSLERTVDAHIKTLRAKLRAVREDEDPIETHRGLGYSLRPAQR
Specific function: Member of the two-component regulatory system CreC/CreB involved in catabolic regulation [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=52.6315789473684, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=40.4444444444444, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=37.7682403433476, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1789809, Length=238, Percent_Identity=34.8739495798319, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=37.3390557939914, Blast_Score=124, Evalue=5e-30, Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=33.1858407079646, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=36.7521367521368, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=36.6379310344828, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI87082012, Length=238, Percent_Identity=34.453781512605, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=35.5263157894737, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1786911, Length=234, Percent_Identity=38.034188034188, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787375, Length=233, Percent_Identity=32.618025751073, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1789402, Length=233, Percent_Identity=35.1931330472103, Blast_Score=102, Evalue=1e-23, Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=27.0042194092827, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1788550, Length=111, Percent_Identity=36.036036036036, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25922; Mature: 25791
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRILIVDDEPAIADMLAYALRTEGYEPDCVGLGGDALAALRGGADYALVILDVGLPDQ CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCC SGFDVCRALRRESDVPVIFLTARSDEVDRIVGLELGADDYVPKPFSPREVASRVRAILRR CCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH ARPQPAAVAPAPAAETCSAPFHHDAAGARIAYHGVWLSLTRYEYRLLATLLDRPGRVQSR CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEHEEEEHHHHHHHHHHHHHCCCCCHHHH AQLMADVWRDAEDSLERTVDAHIKTLRAKLRAVREDEDPIETHRGLGYSLRPAQR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure SRRILIVDDEPAIADMLAYALRTEGYEPDCVGLGGDALAALRGGADYALVILDVGLPDQ CCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCEEEEEEEECCCCC SGFDVCRALRRESDVPVIFLTARSDEVDRIVGLELGADDYVPKPFSPREVASRVRAILRR CCHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH ARPQPAAVAPAPAAETCSAPFHHDAAGARIAYHGVWLSLTRYEYRLLATLLDRPGRVQSR CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEHEEEEHHHHHHHHHHHHHCCCCCHHHH AQLMADVWRDAEDSLERTVDAHIKTLRAKLRAVREDEDPIETHRGLGYSLRPAQR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3531171; 7610040; 9278503 [H]