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The map label for this gene is atoS [C]

Identifier: 119896985

GI number: 119896985

Start: 736677

End: 738734

Strand: Reverse

Name: atoS [C]

Synonym: azo0694

Alternate gene names: 119896985

Gene position: 738734-736677 (Counterclockwise)

Preceding gene: 119896986

Following gene: 119896984

Centisome position: 16.88

GC content: 69.0

Gene sequence:

>2058_bases
ATGGCGAAGCCCGCCGACCATTCGCCCACGCCGGAACAACGCCGCCGCTACGACCTGCTGCTGGCGGGGCTGGACCTGCT
CGACCAGGCCATCGCGGTGTTCGACGCCGCGCCCAAGCTGGTCACCTGGAACAAGGCGCTGCTGCGCCTGCTCGACTTTC
CCGAATCCATGGTGCGGGTCGGCACGCCGTTCGAGGATTTCGTGCGTTTCAACGCCGAGCGCGGCGAATACGGCGATGGC
GATCTCGAACGGCTGGTGAACGAGCGCATGGCGGCCGCGCGCTCCTTCCAGCCGCACTACGCCGAACGCGCGCGCCCCAA
TGGCAAGATCCTGGCGATCCGCGGGGTGCCGATTCCCAACCTCGGCTTCGTCTCGTTGTGGACCGACATCACCGAGCAGC
GCCGCTACGAAACCGTGATCCAGGAGCAGAACAGCCGCCTGGAAGACCGCGTGCGCGCCCGCACCGCCGAGCTGGAAGAA
GCCAACGCACACCTGGCGCGCGCCAAGGCCGACATCGACGACATCGCCGGCGCGCTGTCGAAGAGCGAGGAGCGGCTGCG
CCTGATCCTCGACTCCATCCCCGCGCTGATCGCGCACGTGGATGCCAGCCAGCGCTACCTGTTCGCCAACCGCAGCTACG
CGCAATGGTTCGGCACCACCAAGGAAGAGATCGTGGGCCGCAGCATCGCCGAGGTGTTCGGAGCGCGGGCCTACGCGGCG
ATTTCCCCCCATCTGGAAAACGCCACCCACGGCGAGCGCGTGACCTACGAGTATTCGCGCAAGAACGCCGACGGCCAGAC
GGTGCACGCGCGCAGCGTGGTGGTGCCCGACGTTTCGGCCGAGGGCGGCTTCCAGGGCTATTTCGTGCTGTCGATCGACA
TCACCGAGCAGAAGGCCCACCAGGCCGCGCTGGTGCAGGCGCAGAAGATGGAAGCGGTGGGCCAGCTGACCGGCGGGCTG
GCGCACGACTTCAACAACCTGCTGACCATCATCATCGGCAACCTGTCGGCGCTGCAGACGCAGCTCGGCGACGGTCCCGG
CGCGGAATACGTGGCCCCGGCGCTGCAGGCCTCGCGCCGCGGTGCGGAGCTGATCAAGCGCCTGCTCAGTTTCTCGCGCC
GGCAGCCGCTGGAGCCGAGCGCGGTGGAGGTGGGCGCGCTGGTGCAGAACATGTCGCACCTGCTGGAGCGCTCGCTGTCG
GAAACCATCACGGTGCGGCTGGCGCTGCCGGCCGAGCCGTTGCACGCGCTGGTCGATCCCCACCAGCTGGAAAACGCGCT
GCTCAACCTTGCCCTCAACGCGCGCGATGCGATGCCCGAAGGCGGCCAGTTGACGATCACGGTGACGCGGCGCGAGATCG
ACCTCGACATCGCGCGCCTGGTCGAGGTGCCGGCCGGCAGCTATGTGCAGATCGACGTAACCGACACCGGCAGCGGCATC
GATCCGGCGCTGTTGCCGCGGTTGTTCGAGCCCTTCTTCACCACCAAGCCGTTCGGCATCGGCAGCGGGCTCGGCCTGTC
GATGGTGTATGGCTTCGTGCGCCAGTCCGGCGGCAACATCCGCATCCTCAGCACGCCGGGCGAAGGCACCAACGTGCGCT
TCGTGCTGCCGATGACCCAGCCGGCGCCGCCTCCCTCGCCCGAGTCCGCCCCCGCCGCCGCCGCGCCGCAGCTGCGCAGC
GGCCCGGTGCTGCTGGTGGAGGACGAGCCGGCGGTGCGCCAGGTGATCCGCATGCAGCTCACGGCGCTCGGCTATCCGGT
GATCGAAGCCGAGAACGGCGTCGAGGCGCTGAGCCTGCTGGAAAACGTCGAAGACATCGCGATCCTGGTCAGCGATACCG
TGATGCCCGGCGGCATCGGCGGACGCGAACTCGCCGCGCGCGCGCGCCGCCTGCGCCCCGACCTGCCGATCCTGCTGATC
ACCGGCTACGCCAGCAGCAGCGGCAACCCGACGCCGCCCCCGGCCGACATTCCGGTGTTGCGCAAACCTTTCGATCAGGC
GGCGCTGGCCGCCGCGCTGCAGAACATCCATCCGCCGCAGGAGCACGAACCCTCATGA

Upstream 100 bases:

>100_bases
GACGCGAACGTCAACCAAGGGCGCCGCGGTTTGCGCCCGCGACCGAATGTGCAACCATCGGCGCGATAAATAAAAGCATG
CGGAGGGGAGACAGAGAGCC

Downstream 100 bases:

>100_bases
GTGCGACCCGACCCGAGGCCAGTCCGCCGACCATCTTCGTCCTGGAGGACGAGCCGGACATTGCGCGGCTGATCTGCAGC
AGCCTGACCGAGTACGGTTT

Product: putative hybrid sensor and regulator protein

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 685; Mature: 684

Protein sequence:

>685_residues
MAKPADHSPTPEQRRRYDLLLAGLDLLDQAIAVFDAAPKLVTWNKALLRLLDFPESMVRVGTPFEDFVRFNAERGEYGDG
DLERLVNERMAAARSFQPHYAERARPNGKILAIRGVPIPNLGFVSLWTDITEQRRYETVIQEQNSRLEDRVRARTAELEE
ANAHLARAKADIDDIAGALSKSEERLRLILDSIPALIAHVDASQRYLFANRSYAQWFGTTKEEIVGRSIAEVFGARAYAA
ISPHLENATHGERVTYEYSRKNADGQTVHARSVVVPDVSAEGGFQGYFVLSIDITEQKAHQAALVQAQKMEAVGQLTGGL
AHDFNNLLTIIIGNLSALQTQLGDGPGAEYVAPALQASRRGAELIKRLLSFSRRQPLEPSAVEVGALVQNMSHLLERSLS
ETITVRLALPAEPLHALVDPHQLENALLNLALNARDAMPEGGQLTITVTRREIDLDIARLVEVPAGSYVQIDVTDTGSGI
DPALLPRLFEPFFTTKPFGIGSGLGLSMVYGFVRQSGGNIRILSTPGEGTNVRFVLPMTQPAPPPSPESAPAAAAPQLRS
GPVLLVEDEPAVRQVIRMQLTALGYPVIEAENGVEALSLLENVEDIAILVSDTVMPGGIGGRELAARARRLRPDLPILLI
TGYASSSGNPTPPPADIPVLRKPFDQAALAAALQNIHPPQEHEPS

Sequences:

>Translated_685_residues
MAKPADHSPTPEQRRRYDLLLAGLDLLDQAIAVFDAAPKLVTWNKALLRLLDFPESMVRVGTPFEDFVRFNAERGEYGDG
DLERLVNERMAAARSFQPHYAERARPNGKILAIRGVPIPNLGFVSLWTDITEQRRYETVIQEQNSRLEDRVRARTAELEE
ANAHLARAKADIDDIAGALSKSEERLRLILDSIPALIAHVDASQRYLFANRSYAQWFGTTKEEIVGRSIAEVFGARAYAA
ISPHLENATHGERVTYEYSRKNADGQTVHARSVVVPDVSAEGGFQGYFVLSIDITEQKAHQAALVQAQKMEAVGQLTGGL
AHDFNNLLTIIIGNLSALQTQLGDGPGAEYVAPALQASRRGAELIKRLLSFSRRQPLEPSAVEVGALVQNMSHLLERSLS
ETITVRLALPAEPLHALVDPHQLENALLNLALNARDAMPEGGQLTITVTRREIDLDIARLVEVPAGSYVQIDVTDTGSGI
DPALLPRLFEPFFTTKPFGIGSGLGLSMVYGFVRQSGGNIRILSTPGEGTNVRFVLPMTQPAPPPSPESAPAAAAPQLRS
GPVLLVEDEPAVRQVIRMQLTALGYPVIEAENGVEALSLLENVEDIAILVSDTVMPGGIGGRELAARARRLRPDLPILLI
TGYASSSGNPTPPPADIPVLRKPFDQAALAAALQNIHPPQEHEPS
>Mature_684_residues
AKPADHSPTPEQRRRYDLLLAGLDLLDQAIAVFDAAPKLVTWNKALLRLLDFPESMVRVGTPFEDFVRFNAERGEYGDGD
LERLVNERMAAARSFQPHYAERARPNGKILAIRGVPIPNLGFVSLWTDITEQRRYETVIQEQNSRLEDRVRARTAELEEA
NAHLARAKADIDDIAGALSKSEERLRLILDSIPALIAHVDASQRYLFANRSYAQWFGTTKEEIVGRSIAEVFGARAYAAI
SPHLENATHGERVTYEYSRKNADGQTVHARSVVVPDVSAEGGFQGYFVLSIDITEQKAHQAALVQAQKMEAVGQLTGGLA
HDFNNLLTIIIGNLSALQTQLGDGPGAEYVAPALQASRRGAELIKRLLSFSRRQPLEPSAVEVGALVQNMSHLLERSLSE
TITVRLALPAEPLHALVDPHQLENALLNLALNARDAMPEGGQLTITVTRREIDLDIARLVEVPAGSYVQIDVTDTGSGID
PALLPRLFEPFFTTKPFGIGSGLGLSMVYGFVRQSGGNIRILSTPGEGTNVRFVLPMTQPAPPPSPESAPAAAAPQLRSG
PVLLVEDEPAVRQVIRMQLTALGYPVIEAENGVEALSLLENVEDIAILVSDTVMPGGIGGRELAARARRLRPDLPILLIT
GYASSSGNPTPPPADIPVLRKPFDQAALAAALQNIHPPQEHEPS

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=381, Percent_Identity=26.7716535433071, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=29.4605809128631, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI48994928, Length=549, Percent_Identity=24.5901639344262, Blast_Score=90, Evalue=6e-19,
Organism=Escherichia coli, GI1788713, Length=405, Percent_Identity=26.1728395061728, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=28.755364806867, Blast_Score=81, Evalue=3e-16,
Organism=Escherichia coli, GI1790300, Length=360, Percent_Identity=27.5, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786600, Length=255, Percent_Identity=27.4509803921569, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1790861, Length=235, Percent_Identity=30.2127659574468, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 74452; Mature: 74320

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPADHSPTPEQRRRYDLLLAGLDLLDQAIAVFDAAPKLVTWNKALLRLLDFPESMVRV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHC
GTPFEDFVRFNAERGEYGDGDLERLVNERMAAARSFQPHYAERARPNGKILAIRGVPIPN
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCC
LGFVSLWTDITEQRRYETVIQEQNSRLEDRVRARTAELEEANAHLARAKADIDDIAGALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KSEERLRLILDSIPALIAHVDASQRYLFANRSYAQWFGTTKEEIVGRSIAEVFGARAYAA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCHHEEE
ISPHLENATHGERVTYEYSRKNADGQTVHARSVVVPDVSAEGGFQGYFVLSIDITEQKAH
ECCCCCCCCCCCEEEEEECCCCCCCCEEEECEEEECCCCCCCCCCEEEEEEEEECHHHHH
QAALVQAQKMEAVGQLTGGLAHDFNNLLTIIIGNLSALQTQLGDGPGAEYVAPALQASRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHH
GAELIKRLLSFSRRQPLEPSAVEVGALVQNMSHLLERSLSETITVRLALPAEPLHALVDP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCH
HQLENALLNLALNARDAMPEGGQLTITVTRREIDLDIARLVEVPAGSYVQIDVTDTGSGI
HHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCC
DPALLPRLFEPFFTTKPFGIGSGLGLSMVYGFVRQSGGNIRILSTPGEGTNVRFVLPMTQ
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCC
PAPPPSPESAPAAAAPQLRSGPVLLVEDEPAVRQVIRMQLTALGYPVIEAENGVEALSLL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHH
ENVEDIAILVSDTVMPGGIGGRELAARARRLRPDLPILLITGYASSSGNPTPPPADIPVL
HCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHH
RKPFDQAALAAALQNIHPPQEHEPS
HCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKPADHSPTPEQRRRYDLLLAGLDLLDQAIAVFDAAPKLVTWNKALLRLLDFPESMVRV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHC
GTPFEDFVRFNAERGEYGDGDLERLVNERMAAARSFQPHYAERARPNGKILAIRGVPIPN
CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCCCC
LGFVSLWTDITEQRRYETVIQEQNSRLEDRVRARTAELEEANAHLARAKADIDDIAGALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
KSEERLRLILDSIPALIAHVDASQRYLFANRSYAQWFGTTKEEIVGRSIAEVFGARAYAA
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCHHEEE
ISPHLENATHGERVTYEYSRKNADGQTVHARSVVVPDVSAEGGFQGYFVLSIDITEQKAH
ECCCCCCCCCCCEEEEEECCCCCCCCEEEECEEEECCCCCCCCCCEEEEEEEEECHHHHH
QAALVQAQKMEAVGQLTGGLAHDFNNLLTIIIGNLSALQTQLGDGPGAEYVAPALQASRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHH
GAELIKRLLSFSRRQPLEPSAVEVGALVQNMSHLLERSLSETITVRLALPAEPLHALVDP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCH
HQLENALLNLALNARDAMPEGGQLTITVTRREIDLDIARLVEVPAGSYVQIDVTDTGSGI
HHHHHHHHHHHHCHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEEEECCCCCC
DPALLPRLFEPFFTTKPFGIGSGLGLSMVYGFVRQSGGNIRILSTPGEGTNVRFVLPMTQ
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCC
PAPPPSPESAPAAAAPQLRSGPVLLVEDEPAVRQVIRMQLTALGYPVIEAENGVEALSLL
CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHH
ENVEDIAILVSDTVMPGGIGGRELAARARRLRPDLPILLITGYASSSGNPTPPPADIPVL
HCHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHH
RKPFDQAALAAALQNIHPPQEHEPS
HCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA