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The map label for this gene is ynbD [H]

Identifier: 119896956

GI number: 119896956

Start: 701149

End: 702507

Strand: Direct

Name: ynbD [H]

Synonym: azo0665

Alternate gene names: 119896956

Gene position: 701149-702507 (Clockwise)

Preceding gene: 119896955

Following gene: 119896957

Centisome position: 16.02

GC content: 72.85

Gene sequence:

>1359_bases
ATGAGCCGCCCCGTGCCCGCGCTGGCGCTGCCGCTGACGGACGGGCGCATCCACTGGCTGCGCAGCATCGGCTGGCTGGT
GCTGCTCGGCCCCTTCTTCTTTCTCAGCTACGGCTACGCCAATTCCATGGCTGCGGCGCGCGGCGTCACCGACGCGTTGT
TCTTCGAGTGGGAGCGCGCGATTCCCTTCGTGCCGTGGAGCATCGTGCCGTACTGGTCGATCGACCTGCTCTACGGCCTG
TCCTTCCTGTGCTGCCGGAGCGCGCAGGCGGTCGATCGCCAGGCGTATCGTCTGCTCGCCGCGCAATGCGTGTCGGTTGC
CTGCTTCCTGCTGTTCCCGCTGCGTTTCGCGTTCGAGCGGCCCGCCGCGGACGGTCTGCCCGGCACCCTGTTCACGCTGC
TCGCCGGCTTCGATCAGCCCTACAACCAGGCGCCCTCGCTGCACATCAGCCTGCTGGTGATCATCTGGGCGTGTTTCGCC
CGCGCCGTGCCGGGGCGCTGGCGCGGGGTGGTCCATGTCTGGGCGCTGGCGATCGGGCTCTCGGTGCTGACCACCTACCA
GCACCACTTCATCGATGTGCCGACGGGCGCCGCGGTGGGCCTGCTGTGCCTCTGGTTGTGGCCGGAGCGCGGACCTTCTC
CGCTTGCGGGCTGGCGCCGTCGGGCAAGCCGGGGCCGCCTGCGGCTGGCCTTTGCGTACCTGGCCGGCGCGGCCCTTCTC
GCAGCGGCCGCGCTCGCGGTGGGCGGCGTGGCCTTGTGGCTCGCCTGGCCCGCGCTGGCGCTCGCCCTGGTGGCGTTCTG
CTACGCCGGGCCGGGGGCGGCGGGATTCCAGAAGGACGCCACGGGCCACAGCATCGCGGCACGCTGCCTGCTCGCGCCCT
ACATGCTCGGTGCCTGGCTCAACTCGCGCGCGTGGACACGCCGCCAGCCGCGGCCGGACGCGGTTTGCGACGGGGTCTGG
GTGGGCCGCATGCCGGACGCGGCGGCGATGCGGGCCGGCGGATTTGCCGCCTTGTTCGACCTGTCCGCCGAACTGCCCGC
GCCGCGCGGGCCGTGGCGTTACGCCACGCTCCCATGGCTGGATCTGGTGGCGCCGGAATCGTCCGCGCTGATCGCCGCCG
CGCGCGGCATCGAGGCCGAACGGCGGGCTGCCAACGGACCGCTGCTGGTGTGCTGCGCGCTCGGCTATTCGCGCAGTGCC
GCCGCCGTCGCGGCCTGGCTGCTGCTCAGCGGACGCGCCGCCGATGTCGATCAGGCGGTGGCCATGGTGGCGCGCGCCCG
TCCGCGCGTCGTCCTCGGGGACGACCTGCGTGCGGCACTGGCAGGCTGCGCCGCGCAGACGGGCAGCGCCGATGACTGA

Upstream 100 bases:

>100_bases
AGATGGACCAGCTGGTGGAGGCGGCGGGCTTCGACAAGCTGGAGCAGCGGGTGGACGAGTGGGGCATCTTCACCGTCTCG
CTGGCGCGCCGGCGCGCCGC

Downstream 100 bases:

>100_bases
ACGCGAGCGCGTGGACGCCGCCGCGCGTGCCGCCGCGTGCGCGGATCTGCTCGCGCTCGGCCGCCCGCTCGGGCGTGCGT
CGGCGGCCCTGGCGCTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSRPVPALALPLTDGRIHWLRSIGWLVLLGPFFFLSYGYANSMAAARGVTDALFFEWERAIPFVPWSIVPYWSIDLLYGL
SFLCCRSAQAVDRQAYRLLAAQCVSVACFLLFPLRFAFERPAADGLPGTLFTLLAGFDQPYNQAPSLHISLLVIIWACFA
RAVPGRWRGVVHVWALAIGLSVLTTYQHHFIDVPTGAAVGLLCLWLWPERGPSPLAGWRRRASRGRLRLAFAYLAGAALL
AAAALAVGGVALWLAWPALALALVAFCYAGPGAAGFQKDATGHSIAARCLLAPYMLGAWLNSRAWTRRQPRPDAVCDGVW
VGRMPDAAAMRAGGFAALFDLSAELPAPRGPWRYATLPWLDLVAPESSALIAAARGIEAERRAANGPLLVCCALGYSRSA
AAVAAWLLLSGRAADVDQAVAMVARARPRVVLGDDLRAALAGCAAQTGSADD

Sequences:

>Translated_452_residues
MSRPVPALALPLTDGRIHWLRSIGWLVLLGPFFFLSYGYANSMAAARGVTDALFFEWERAIPFVPWSIVPYWSIDLLYGL
SFLCCRSAQAVDRQAYRLLAAQCVSVACFLLFPLRFAFERPAADGLPGTLFTLLAGFDQPYNQAPSLHISLLVIIWACFA
RAVPGRWRGVVHVWALAIGLSVLTTYQHHFIDVPTGAAVGLLCLWLWPERGPSPLAGWRRRASRGRLRLAFAYLAGAALL
AAAALAVGGVALWLAWPALALALVAFCYAGPGAAGFQKDATGHSIAARCLLAPYMLGAWLNSRAWTRRQPRPDAVCDGVW
VGRMPDAAAMRAGGFAALFDLSAELPAPRGPWRYATLPWLDLVAPESSALIAAARGIEAERRAANGPLLVCCALGYSRSA
AAVAAWLLLSGRAADVDQAVAMVARARPRVVLGDDLRAALAGCAAQTGSADD
>Mature_451_residues
SRPVPALALPLTDGRIHWLRSIGWLVLLGPFFFLSYGYANSMAAARGVTDALFFEWERAIPFVPWSIVPYWSIDLLYGLS
FLCCRSAQAVDRQAYRLLAAQCVSVACFLLFPLRFAFERPAADGLPGTLFTLLAGFDQPYNQAPSLHISLLVIIWACFAR
AVPGRWRGVVHVWALAIGLSVLTTYQHHFIDVPTGAAVGLLCLWLWPERGPSPLAGWRRRASRGRLRLAFAYLAGAALLA
AAALAVGGVALWLAWPALALALVAFCYAGPGAAGFQKDATGHSIAARCLLAPYMLGAWLNSRAWTRRQPRPDAVCDGVWV
GRMPDAAAMRAGGFAALFDLSAELPAPRGPWRYATLPWLDLVAPESSALIAAARGIEAERRAANGPLLVCCALGYSRSAA
AVAAWLLLSGRAADVDQAVAMVARARPRVVLGDDLRAALAGCAAQTGSADD

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

Organism=Escherichia coli, GI1787679, Length=433, Percent_Identity=39.4919168591224, Blast_Score=261, Evalue=6e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR000340
- InterPro:   IPR020422
- InterPro:   IPR000326
- InterPro:   IPR016130 [H]

Pfam domain/function: PF00782 DSPc; PF01569 PAP2 [H]

EC number: NA

Molecular weight: Translated: 48479; Mature: 48348

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50056 TYR_PHOSPHATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPVPALALPLTDGRIHWLRSIGWLVLLGPFFFLSYGYANSMAAARGVTDALFFEWERA
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHC
IPFVPWSIVPYWSIDLLYGLSFLCCRSAQAVDRQAYRLLAAQCVSVACFLLFPLRFAFER
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAADGLPGTLFTLLAGFDQPYNQAPSLHISLLVIIWACFARAVPGRWRGVVHVWALAIGL
CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SVLTTYQHHFIDVPTGAAVGLLCLWLWPERGPSPLAGWRRRASRGRLRLAFAYLAGAALL
HHHHHHHHHEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHH
AAAALAVGGVALWLAWPALALALVAFCYAGPGAAGFQKDATGHSIAARCLLAPYMLGAWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
NSRAWTRRQPRPDAVCDGVWVGRMPDAAAMRAGGFAALFDLSAELPAPRGPWRYATLPWL
CCCCCCCCCCCCCHHHCCEEECCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCEECCCHH
DLVAPESSALIAAARGIEAERRAANGPLLVCCALGYSRSAAAVAAWLLLSGRAADVDQAV
HHCCCCCCHHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHH
AMVARARPRVVLGDDLRAALAGCAAQTGSADD
HHHHHCCCCEEECCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRPVPALALPLTDGRIHWLRSIGWLVLLGPFFFLSYGYANSMAAARGVTDALFFEWERA
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHC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HHHHHCCCCEEECCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]