| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is hylD [H]
Identifier: 119896938
GI number: 119896938
Start: 674498
End: 675913
Strand: Direct
Name: hylD [H]
Synonym: azo0647
Alternate gene names: 119896938
Gene position: 674498-675913 (Clockwise)
Preceding gene: 119896937
Following gene: 119896939
Centisome position: 15.41
GC content: 68.15
Gene sequence:
>1416_bases ATGGCTGCGTTCGGACAAGACGTCTTCAGGCGCTTCGGCACGGTCACCGAACGCTTCTCCGGCACCGGCGGCAAACTCTT CGGCGGCCTGCTCGCGCGCCTGTCGAGCGTGGAGCGCGACGACAGCCTGGACTGGGCGAGCGACGCCGACTGGGCGCGCC TGCAGCAGGAGCCGCTGCGCGCGCGCGCGGTACTCAAGGTCAGCGCGATCGCGCTGCTGGTGCTGCTCGGCTGGGCCGCG GTGGCGCATGTGGACGAGGTGACCAAGGGCGACGGCAAGGTGATCCCGTCCAGCCAGCTGCAGATCATCCAGTCGGTCGA TGGCGGCGTGGTGGAGTCGATCGCGGTGCGCGAGGGCGAGGTGGTCGAGGCCGGGCAGCTGCTGCTCAAGGTCGATCCCA CCCGTTTCATGTCCTCGCTGCTGGAAAACCGCGCCGAGTTCCTCGCGCTGGAAATCAAGCGCCGGCGGCTCGAGGCGCTG ACCCAGGGGACGCCGTTCTCGGTGCCGGCCGAGCTGGAGAAGGAGGCGGCGGACATCGCCGCCCACGAGCGCCGGCTGTA TGAATCCAGCCGCGCCGAGATGGACGCGCAGCAGTCGATCGCGCGCGACCAGCTGCGCCAGCGCGAGCAGGAACTCAACG AGGTGCGCGCCCGCAGTGAGAACGCCGCCCGCGCCTACGAACTGGTGCAGCAGGAACTCAAGGTCACCAAGCCGCTCGCG GCCTCCGGCGCGGTATCCGAGGTCGAGCTGCTGCGTCTGGAGCGCGACGTGTCGCGCTTGCGCGGCGAGCGCGAGCAGAG CGCGGCGCAGATTTCGCGCATCCAGTCGGCCATCGCCGAATCCACGCGCAAGATCCAGGAGATCGAGCTGACGGTGCGCA ACCAGCTGCGCAACGAGCTTTCGGACACCATGGCGCGGCTGGGCAGCCTGACCCAGGGCAGCCGCATGCTGGCCGACCGC GTCAAGCACGCCGAAATCCGCGCGCCGATGCGCGGCACGGTCAAGCGCATCCTCGTCAACACCGTGGGTGGCGTGGTCCA GCCGGGCAAGGAAGTGGCCGAGATCGTGCCGCTCGACGACGCGCTGATCCTCGAAGCGCAGGTCAAGCCGAGCGACATCG CCTTCCTGCGCCCGGGTCAGTCGGCGCTGGTCAAGTTCTCCGCGTACGACTTCTCGATCTACGGCGGCCTGGAGGCGGTC GTGGACCAGATTTCCGCCGACACCGTGGTCGATGCAAAGGGTTCCGCGTTCTACGTGGTGCGGGTGCGCACGCTGCATTC CTCTCTGGGTGAAAACCTGCCGATCATTCCGGGCATGGTGGCCGAAGTGGACATCCTGACCGGCAAGAAGACCATCCTCT CCTACCTGCTGAAGCCCGTGCTGCGGGCCAAGGCCAACGCACTGTCCGAACGATGA
Upstream 100 bases:
>100_bases ATCGCGTCATCGTGGTCGATGGCGGCCGCATCGTCGCCGACGGTCCCAAGGCGCAGGTGGTGGAAGCGTTGCGCCAGGGT CGCATCGGGAGGGTCGGCTG
Downstream 100 bases:
>100_bases GCCGACACTTCTTCCTCACCCGCAACGGATTTTCCTCACCCCGGTGGACCGAAGCGTTCCCGCACGCCGTCGTTGCCGCC AACGCTGACGGTGTCGCGCC
Product: HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MAAFGQDVFRRFGTVTERFSGTGGKLFGGLLARLSSVERDDSLDWASDADWARLQQEPLRARAVLKVSAIALLVLLGWAA VAHVDEVTKGDGKVIPSSQLQIIQSVDGGVVESIAVREGEVVEAGQLLLKVDPTRFMSSLLENRAEFLALEIKRRRLEAL TQGTPFSVPAELEKEAADIAAHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARSENAARAYELVQQELKVTKPLA ASGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIAESTRKIQEIELTVRNQLRNELSDTMARLGSLTQGSRMLADR VKHAEIRAPMRGTVKRILVNTVGGVVQPGKEVAEIVPLDDALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEAV VDQISADTVVDAKGSAFYVVRVRTLHSSLGENLPIIPGMVAEVDILTGKKTILSYLLKPVLRAKANALSER
Sequences:
>Translated_471_residues MAAFGQDVFRRFGTVTERFSGTGGKLFGGLLARLSSVERDDSLDWASDADWARLQQEPLRARAVLKVSAIALLVLLGWAA VAHVDEVTKGDGKVIPSSQLQIIQSVDGGVVESIAVREGEVVEAGQLLLKVDPTRFMSSLLENRAEFLALEIKRRRLEAL TQGTPFSVPAELEKEAADIAAHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARSENAARAYELVQQELKVTKPLA ASGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIAESTRKIQEIELTVRNQLRNELSDTMARLGSLTQGSRMLADR VKHAEIRAPMRGTVKRILVNTVGGVVQPGKEVAEIVPLDDALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEAV VDQISADTVVDAKGSAFYVVRVRTLHSSLGENLPIIPGMVAEVDILTGKKTILSYLLKPVLRAKANALSER >Mature_470_residues AAFGQDVFRRFGTVTERFSGTGGKLFGGLLARLSSVERDDSLDWASDADWARLQQEPLRARAVLKVSAIALLVLLGWAAV AHVDEVTKGDGKVIPSSQLQIIQSVDGGVVESIAVREGEVVEAGQLLLKVDPTRFMSSLLENRAEFLALEIKRRRLEALT QGTPFSVPAELEKEAADIAAHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARSENAARAYELVQQELKVTKPLAA SGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIAESTRKIQEIELTVRNQLRNELSDTMARLGSLTQGSRMLADRV KHAEIRAPMRGTVKRILVNTVGGVVQPGKEVAEIVPLDDALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEAVV DQISADTVVDAKGSAFYVVRVRTLHSSLGENLPIIPGMVAEVDILTGKKTILSYLLKPVLRAKANALSER
Specific function: Involved in the secretion of alkaline protease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 51664; Mature: 51533
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFGQDVFRRFGTVTERFSGTGGKLFGGLLARLSSVERDDSLDWASDADWARLQQEPLR CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH ARAVLKVSAIALLVLLGWAAVAHVDEVTKGDGKVIPSSQLQIIQSVDGGVVESIAVREGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCC VVEAGQLLLKVDPTRFMSSLLENRAEFLALEIKRRRLEALTQGTPFSVPAELEKEAADIA HHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARSENAARAYELVQQELKVTKPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC ASGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIAESTRKIQEIELTVRNQLRNEL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDTMARLGSLTQGSRMLADRVKHAEIRAPMRGTVKRILVNTVGGVVQPGKEVAEIVPLDD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC ALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEAVVDQISADTVVDAKGSAFYVV CEEEEEECCCCCEEEECCCHHHEEEEEEECCHHHCCHHHHHHHHCCCCEEECCCCEEEEE RVRTLHSSLGENLPIIPGMVAEVDILTGKKTILSYLLKPVLRAKANALSER EHHHHHHHHCCCCCCCCCHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAFGQDVFRRFGTVTERFSGTGGKLFGGLLARLSSVERDDSLDWASDADWARLQQEPLR CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH ARAVLKVSAIALLVLLGWAAVAHVDEVTKGDGKVIPSSQLQIIQSVDGGVVESIAVREGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCC VVEAGQLLLKVDPTRFMSSLLENRAEFLALEIKRRRLEALTQGTPFSVPAELEKEAADIA HHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARSENAARAYELVQQELKVTKPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC ASGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIAESTRKIQEIELTVRNQLRNEL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDTMARLGSLTQGSRMLADRVKHAEIRAPMRGTVKRILVNTVGGVVQPGKEVAEIVPLDD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC ALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEAVVDQISADTVVDAKGSAFYVV CEEEEEECCCCCEEEECCCHHHEEEEEEECCHHHCCHHHHHHHHCCCCEEECCCCEEEEE RVRTLHSSLGENLPIIPGMVAEVDILTGKKTILSYLLKPVLRAKANALSER EHHHHHHHHCCCCCCCCCHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1427098; 10984043 [H]