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The map label for this gene is ruvB

Identifier: 119896892

GI number: 119896892

Start: 628671

End: 629729

Strand: Reverse

Name: ruvB

Synonym: azo0601

Alternate gene names: 119896892

Gene position: 629729-628671 (Counterclockwise)

Preceding gene: 119896893

Following gene: 119896891

Centisome position: 14.39

GC content: 69.78

Gene sequence:

>1059_bases
ATGATCGAAACCGACAAGCTCCGCGCCGCCGCGCCCGAGCGCCTGATCTCGCCGCAGCCCGCCGACCGCCAGGAAGACGC
GGTCGAACGCGCGCTGCGCCCCAAGCGCCTGGCGGAATACGTCGGTCAGGCCAAGATCCGCGAACAGCTGGAAATCTTCA
TCCACGCGGCCAAGAAGCGCAGCGAAGCGCTCGACCACGTGCTGCTGTTCGGTCCGCCCGGGCTGGGCAAGACCACGCTG
GCCCACATCGTCGCCGCCGAGATGGGCGTCAACCTGCGCCAGACCTCCGGCCCGGTGCTGGAACGCGCCGGCGACCTCGC
CGCGCTGCTGACCAACCTCGAACCGCACGACGTGCTGTTCATCGACGAGATCCACCGCCTGTCGCCGGTGGTCGAGGAAA
TCCTCTACCCGGCGCTGGAAGACTTCCAGATCGACATCATGATCGGCGAAGGCCCGGCCGCGCGCTCGGTCAAGCTCGAC
CTGCCGCCCTTCACGCTGGTCGGCGCCACCACCCGCGCCGGCATGCTCACCAACCCGCTGCGCGACCGCTTCGGCATCGT
GTCGCGGCTGGAGTTCTACACGCCGGACGAGCTCGGCTTCATCGTCAGCCGCTCGGCGCGCCTGCTCAATGTCGAGATCG
ACGACGACGGCGCGCTCGAAATCGCCCGCCGCGCACGCGGCACGCCCCGCATCGCCAACCGTCTGCTGCGCCGGGTGCGC
GACTACGCCGAGGTCAAGGCCGGCGGCCACATCACCCGAGCGGTGGCCGATGCCGCGCTGCGCATGCTGGACGTCGACAG
CCTCGGGCTGGACCTGATGGACCGCAAGATGCTGTCGGCGATGCTGGAAAAATTCGGCGGCGGCCCGGTCGGGCTGGACA
ACCTCGCCGCCGCGATCGGCGAATCCACCGACACCATCGAGGACGTCATCGAGCCCTACCTGATCCAGCAGGGCTATCTG
CAGCGCACCCCGCGCGGCCGCATGGCGACGCACTCGATCTGGCAGCATTTCGGCCTCGCCCCGCCGCGCCCCGGCGGCAC
CGACCTCTTCGGCGGCTAG

Upstream 100 bases:

>100_bases
TCCGACGGCATCCGCCAGGCGCTCAAGCTGCTGTCCAAGGCCTGAACAAAACCACAGTCATGCGCACCCCGGCAGGCGTC
CGAGCGGCTAAACTCTCGCC

Downstream 100 bases:

>100_bases
GCGGATGCTGGTTCCGCTTCTGCTCGGGCTGCTGGCCCTGGCGCTGCTGGCCGTGCTGGCCACGCGTGGGCGCGCCACGC
AAAGTCGCCGGCGCGCGGCG

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MIETDKLRAAAPERLISPQPADRQEDAVERALRPKRLAEYVGQAKIREQLEIFIHAAKKRSEALDHVLLFGPPGLGKTTL
AHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLD
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYTPDELGFIVSRSARLLNVEIDDDGALEIARRARGTPRIANRLLRRVR
DYAEVKAGGHITRAVADAALRMLDVDSLGLDLMDRKMLSAMLEKFGGGPVGLDNLAAAIGESTDTIEDVIEPYLIQQGYL
QRTPRGRMATHSIWQHFGLAPPRPGGTDLFGG

Sequences:

>Translated_352_residues
MIETDKLRAAAPERLISPQPADRQEDAVERALRPKRLAEYVGQAKIREQLEIFIHAAKKRSEALDHVLLFGPPGLGKTTL
AHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLD
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYTPDELGFIVSRSARLLNVEIDDDGALEIARRARGTPRIANRLLRRVR
DYAEVKAGGHITRAVADAALRMLDVDSLGLDLMDRKMLSAMLEKFGGGPVGLDNLAAAIGESTDTIEDVIEPYLIQQGYL
QRTPRGRMATHSIWQHFGLAPPRPGGTDLFGG
>Mature_352_residues
MIETDKLRAAAPERLISPQPADRQEDAVERALRPKRLAEYVGQAKIREQLEIFIHAAKKRSEALDHVLLFGPPGLGKTTL
AHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLD
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYTPDELGFIVSRSARLLNVEIDDDGALEIARRARGTPRIANRLLRRVR
DYAEVKAGGHITRAVADAALRMLDVDSLGLDLMDRKMLSAMLEKFGGGPVGLDNLAAAIGESTDTIEDVIEPYLIQQGYL
QRTPRGRMATHSIWQHFGLAPPRPGGTDLFGG

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=342, Percent_Identity=71.9298245614035, Blast_Score=495, Evalue=1e-141,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_AZOSB (A1K313)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_932105.1
- ProteinModelPortal:   A1K313
- SMR:   A1K313
- STRING:   A1K313
- GeneID:   4606469
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0601
- eggNOG:   COG2255
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- PhylomeDB:   A1K313
- ProtClustDB:   PRK00080
- BioCyc:   ASP62928:AZO0601-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 38649; Mature: 38649

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETDKLRAAAPERLISPQPADRQEDAVERALRPKRLAEYVGQAKIREQLEIFIHAAKKR
CCCCCHHHHHCCHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEALDHVLLFGPPGLGKTTLAHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF
HHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
IDEIHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCEEEECCCHHCCHHHHHH
RDRFGIVSRLEFYTPDELGFIVSRSARLLNVEIDDDGALEIARRARGTPRIANRLLRRVR
HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHH
DYAEVKAGGHITRAVADAALRMLDVDSLGLDLMDRKMLSAMLEKFGGGPVGLDNLAAAIG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ESTDTIEDVIEPYLIQQGYLQRTPRGRMATHSIWQHFGLAPPRPGGTDLFGG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIETDKLRAAAPERLISPQPADRQEDAVERALRPKRLAEYVGQAKIREQLEIFIHAAKKR
CCCCCHHHHHCCHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEALDHVLLFGPPGLGKTTLAHIVAAEMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF
HHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE
IDEIHRLSPVVEEILYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPL
HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCEEEECCCHHCCHHHHHH
RDRFGIVSRLEFYTPDELGFIVSRSARLLNVEIDDDGALEIARRARGTPRIANRLLRRVR
HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHH
DYAEVKAGGHITRAVADAALRMLDVDSLGLDLMDRKMLSAMLEKFGGGPVGLDNLAAAIG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ESTDTIEDVIEPYLIQQGYLQRTPRGRMATHSIWQHFGLAPPRPGGTDLFGG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA