| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is metK
Identifier: 119896880
GI number: 119896880
Start: 620087
End: 621253
Strand: Reverse
Name: metK
Synonym: azo0589
Alternate gene names: 119896880
Gene position: 621253-620087 (Counterclockwise)
Preceding gene: 119896884
Following gene: 119896878
Centisome position: 14.2
GC content: 66.75
Gene sequence:
>1167_bases ATGGCCAACGAGTTTCTCTTCACCTCCGAATCGGTCTCCGAAGGCCACCCGGACAAGGTTGCCGACCAGATCTCCGATGG CGTGCTCGACGCCATCCTGGCCGAAGACCCCAAGGCGCGCGTCGCCTGCGAAACCCTGGTGTCCACCGGCCTGGTGGTGA TCTCCGGCGAAATCACCACCTCCGCCCACCCCAACTACCGCGAGATCGCGCAGGATGTGGTGCGCCGCATCGGCTACGAC AACTCCGACATCGGCTTCGACTACAAGTCGTGCGCCGTGCTGGCGGCGATCAATCGCCAGTCGTCCGACATCGCCCAGGG CGTGAATGAAGGCGAAGGGCTCGATCTCGACCAGGGTGCCGGCGACCAGGGCCTGATGTTCGGCTACGCCACCAACGAGA CCCCCAGCCTGATGCCGCTGCCGATCTACTACGCGCACCGCATCATGCAGCGCCAGGCCGAAGTGCGTAAGGACGGCCGC CTGCCCTGGCTGCGCCCGGACGCCAAGAGCCAGCTCACGGTGAAGTATGTCGACGGCAAGCCGGTGGCGATCGACACCGT GGTCGTGTCGACGCAGCACAACCCGGAGGTGTCGCACGCGCAGATTTCCGAGGCGGTGATCGAGGAGATCATCAAGCCGG TGCTGCCCAAGGAGCTGATGCAGGGCGAGGTGCGCTACCTGATCAACCCCACCGGCCGCTTCGTCATCGGCGGCCCGCAC GGCGACTGCGGCCTCACCGGGCGCAAGATCATCGTCGACACCTACGGCGGCGCAGCCCACCACGGCGGCGGTGCCTTCTC CGGCAAGGATCCGTCCAAGGTCGACCGTTCCGCCGCCTACGCCGGCCGCTACGTCGCCAAGAACGTGGTCGCCGCCGGTC TGGCCGACAAGTGCGAAGTGCAGGTCGCCTACGCGATCGGCGTCGCCAAGCCGGTGTCGCTGATGGTGAATACCTTCGGC ACCGGCAAGATCGCCGACGACAAGATCGTCGACCTGATCCGTGCCCACTTCGACCTCCGCCCCAAGGCCATCATCCAGAC CCTGGACCTGCTGCGCCCGATCTATTCCCGCACCGCCGCCTACGGCCACTTCGGCCGTGACGAGCCGGAGTTCACGTGGG AGCAGACCGACAAGGCCTCCGCGCTGCGCGCCGCCGCCGGTCTCTAA
Upstream 100 bases:
>100_bases CACCAGAAATACTGCTAAAGCGTCGGCTGCTCGCCGAAATCCCCGGAGCTGGCCACGACGCCACAGAACCGGGGATTTTT GTTTTTCAGGAGCAGAACGC
Downstream 100 bases:
>100_bases GCACGGTACTGCCGCGGGCGTGCGCGCCCGCGGCACGGCTTACTGGAATGTGGACAGACGTTCGCCCGCGCCCTGCAGCG GGCCCAGCGGGTTGCGGCTG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYD NSDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGR LPWLRPDAKSQLTVKYVDGKPVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPH GDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFG TGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAAYGHFGRDEPEFTWEQTDKASALRAAAGL
Sequences:
>Translated_388_residues MANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYD NSDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGR LPWLRPDAKSQLTVKYVDGKPVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPH GDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFG TGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAAYGHFGRDEPEFTWEQTDKASALRAAAGL >Mature_387_residues ANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDN SDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRL PWLRPDAKSQLTVKYVDGKPVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPHG DCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEVQVAYAIGVAKPVSLMVNTFGT GKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAAYGHFGRDEPEFTWEQTDKASALRAAAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family
Homologues:
Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=54.8128342245989, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI4557737, Length=374, Percent_Identity=54.5454545454545, Blast_Score=411, Evalue=1e-115, Organism=Escherichia coli, GI1789311, Length=383, Percent_Identity=69.9738903394256, Blast_Score=553, Evalue=1e-159, Organism=Caenorhabditis elegans, GI17538498, Length=377, Percent_Identity=54.9071618037135, Blast_Score=417, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17538494, Length=377, Percent_Identity=54.6419098143236, Blast_Score=415, Evalue=1e-116, Organism=Caenorhabditis elegans, GI25145633, Length=380, Percent_Identity=54.4736842105263, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17551082, Length=382, Percent_Identity=53.4031413612565, Blast_Score=406, Evalue=1e-114, Organism=Caenorhabditis elegans, GI32565905, Length=377, Percent_Identity=50.132625994695, Blast_Score=354, Evalue=6e-98, Organism=Caenorhabditis elegans, GI32565911, Length=329, Percent_Identity=51.9756838905775, Blast_Score=342, Evalue=2e-94, Organism=Caenorhabditis elegans, GI25145635, Length=332, Percent_Identity=51.2048192771084, Blast_Score=337, Evalue=8e-93, Organism=Caenorhabditis elegans, GI32565903, Length=302, Percent_Identity=52.6490066225166, Blast_Score=308, Evalue=3e-84, Organism=Caenorhabditis elegans, GI32565909, Length=84, Percent_Identity=58.3333333333333, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI32565907, Length=41, Percent_Identity=78.0487804878049, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=379, Percent_Identity=56.9920844327177, Blast_Score=432, Evalue=1e-122, Organism=Saccharomyces cerevisiae, GI6320710, Length=381, Percent_Identity=55.6430446194226, Blast_Score=431, Evalue=1e-122, Organism=Drosophila melanogaster, GI45552159, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580529, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580537, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580533, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580535, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580531, Length=375, Percent_Identity=51.7333333333333, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI24580527, Length=375, Percent_Identity=51.7333333333333, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24580525, Length=375, Percent_Identity=51.7333333333333, Blast_Score=371, Evalue=1e-103, Organism=Drosophila melanogaster, GI24580541, Length=376, Percent_Identity=49.2021276595745, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24580539, Length=119, Percent_Identity=53.781512605042, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): METK_AZOSB (A1K301)
Other databases:
- EMBL: AM406670 - RefSeq: YP_932093.1 - ProteinModelPortal: A1K301 - SMR: A1K301 - STRING: A1K301 - GeneID: 4606463 - GenomeReviews: AM406670_GR - KEGG: azo:azo0589 - eggNOG: COG0192 - HOGENOM: HBG443662 - OMA: IYYAHRL - PhylomeDB: A1K301 - ProtClustDB: PRK05250 - BioCyc: ASP62928:AZO0589-MONOMER - GO: GO:0005737 - HAMAP: MF_00086 - InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 - PANTHER: PTHR11964 - PIRSF: PIRSF000497 - TIGRFAMs: TIGR01034
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N; SSF55973 S-AdoMet_synt
EC number: =2.5.1.6
Molecular weight: Translated: 41819; Mature: 41688
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00376 ADOMET_SYNTHASE_1; PS00377 ADOMET_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITT CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCEEC SAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGA CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC GDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPH CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEV CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE QVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAA EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YGHFGRDEPEFTWEQTDKASALRAAAGL HCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure ANEFLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITT CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCEEC SAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVNEGEGLDLDQGA CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC GDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK CCCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCC PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELMQGEVRYLINPTGRFVIGGPH CEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCCCCEEEECCC GDCGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAGRYVAKNVVAAGLADKCEV CCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE QVAYAIGVAKPVSLMVNTFGTGKIADDKIVDLIRAHFDLRPKAIIQTLDLLRPIYSRTAA EEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YGHFGRDEPEFTWEQTDKASALRAAAGL HCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA