| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is mdeA [H]
Identifier: 119896763
GI number: 119896763
Start: 509624
End: 510913
Strand: Direct
Name: mdeA [H]
Synonym: azo0472
Alternate gene names: 119896763
Gene position: 509624-510913 (Clockwise)
Preceding gene: 119896761
Following gene: 119896764
Centisome position: 11.65
GC content: 69.15
Gene sequence:
>1290_bases ATGCCCGATCATCGCTTCGGCATCGAATCCCTTTGCCTGCACGCCGGCCAGCAGCCCGACGCCGAAACCGGCGCGCGCGC GGTGCCGATCTACCAGACCACCTCCTTCGTCTTCGATTCGCCCGAGCACGCGGCCGAACTGTTCAACCTGCAGACCTTCG GCAACGTCTATTCGCGCATCTCCAACCCCACGGTGGCGGTGTTCGAAGAGCGCATGGCGGCGCTCGAAGGCGGCCGCGCC GCGCTCGCCACCTCGTCCGGCCTGGCCGCGCAGATGACCGCGCTGCTGACCCTGGCGCAGGCGGGCGACGAAATCGTCGC GGCGCGCACGCTGTACGGCGGCAGCTATTCCCAGCTCGACGTCAGCCTGCGCCGGCTCGGCATCAGCACGGTGTTCGTCG ATCCGTCCGACCCGGAGAACTTCCGCGCCGCGATCACCGACCGCACCAAGGCGGTGTATGGCGAGATCATCGGCAACCCC AGCCTCAACGTGTTCGACGTGGCCGCGGTGGCGGCGATCACCCGGGCTGCTGGGGTGCCGCTGGTGATCGACAGCACGCT CGCCTCGCCCTACCTGTGCCGGCCGCTTGAACACGGCGCCGACATCGTCATCCACTCGGCCACCAAGTACATCGGCGGCC ACGGCACCACCATGGGCGGCGTGCTGGTCGAATCCGGCACCTTCCCGTGGGACAACGGCCGCTTCCCGCAGATGGTCGAA CCGTCGCCGGGCTACCACGGCGTGCGTTTCTACGAAACCTTCGGCAACTTCGGCTTCACGATGAAGGCGCGCATGGAAAC CCTGCGCACCTTCGGCCAGGCGCTGTCGCCGTTCAACGCCTTCATGCTGCTGCAGGGGCTGGAGACGCTGCATGTGCGCA TGGACCGCCATGTCGCCAATGCGCGCGCGGTGGCGGACTTCCTCGCCGCCCACCCGGCGGTGGCGTGGGTGAATTACCCC GGCCTCGCCGCCAGCCCCGAGCACGCGCTGGCGCAGCGCTATTTCCCCAAGGGCCCGGGCGCCATCCTGTCCTTCGGCAT CCGCGGCGGCCAGCCCGCCGGCGAGCGCTTCATCGAGGCGCTGCAGATGATCAGTCACCTCGCCAACGTCGGCGACGCCA AGACCCTGGTGATCCACCCGGCCTCGACCACCCACCGCCAGCTCTCCGAAGAAGAGCAGCGCGCCGCCGGTGTGCCGCCC GACATGGTGCGGCTGTCGGTCGGCATCGAAACCCTGGACGACATCCTCTGGGATCTCGACCAGGCGCTCGCGCGCGGAGC CGCGGCGTGA
Upstream 100 bases:
>100_bases CAGCCAGAACAGCAGCAGCGCAAAATCGAAAGTCATCGGGATTTGGCGGGCGAGGGTGGGGCCAGTATTATCGGCGCAAT TCCTCAGCGTCCCCGCGCCC
Downstream 100 bases:
>100_bases GTCTGCGCCTGCTGCTCGGTATCGCGATCGCATTGCTGCTGGTCTACGGCGGCTGGCAGCTGCTGCGCGCGGTGCGCGGC GGCTGGCGCGCGGGACGGGC
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPDHRFGIESLCLHAGQQPDAETGARAVPIYQTTSFVFDSPEHAAELFNLQTFGNVYSRISNPTVAVFEERMAALEGGRA ALATSSGLAAQMTALLTLAQAGDEIVAARTLYGGSYSQLDVSLRRLGISTVFVDPSDPENFRAAITDRTKAVYGEIIGNP SLNVFDVAAVAAITRAAGVPLVIDSTLASPYLCRPLEHGADIVIHSATKYIGGHGTTMGGVLVESGTFPWDNGRFPQMVE PSPGYHGVRFYETFGNFGFTMKARMETLRTFGQALSPFNAFMLLQGLETLHVRMDRHVANARAVADFLAAHPAVAWVNYP GLAASPEHALAQRYFPKGPGAILSFGIRGGQPAGERFIEALQMISHLANVGDAKTLVIHPASTTHRQLSEEEQRAAGVPP DMVRLSVGIETLDDILWDLDQALARGAAA
Sequences:
>Translated_429_residues MPDHRFGIESLCLHAGQQPDAETGARAVPIYQTTSFVFDSPEHAAELFNLQTFGNVYSRISNPTVAVFEERMAALEGGRA ALATSSGLAAQMTALLTLAQAGDEIVAARTLYGGSYSQLDVSLRRLGISTVFVDPSDPENFRAAITDRTKAVYGEIIGNP SLNVFDVAAVAAITRAAGVPLVIDSTLASPYLCRPLEHGADIVIHSATKYIGGHGTTMGGVLVESGTFPWDNGRFPQMVE PSPGYHGVRFYETFGNFGFTMKARMETLRTFGQALSPFNAFMLLQGLETLHVRMDRHVANARAVADFLAAHPAVAWVNYP GLAASPEHALAQRYFPKGPGAILSFGIRGGQPAGERFIEALQMISHLANVGDAKTLVIHPASTTHRQLSEEEQRAAGVPP DMVRLSVGIETLDDILWDLDQALARGAAA >Mature_428_residues PDHRFGIESLCLHAGQQPDAETGARAVPIYQTTSFVFDSPEHAAELFNLQTFGNVYSRISNPTVAVFEERMAALEGGRAA LATSSGLAAQMTALLTLAQAGDEIVAARTLYGGSYSQLDVSLRRLGISTVFVDPSDPENFRAAITDRTKAVYGEIIGNPS LNVFDVAAVAAITRAAGVPLVIDSTLASPYLCRPLEHGADIVIHSATKYIGGHGTTMGGVLVESGTFPWDNGRFPQMVEP SPGYHGVRFYETFGNFGFTMKARMETLRTFGQALSPFNAFMLLQGLETLHVRMDRHVANARAVADFLAAHPAVAWVNYPG LAASPEHALAQRYFPKGPGAILSFGIRGGQPAGERFIEALQMISHLANVGDAKTLVIHPASTTHRQLSEEEQRAAGVPPD MVRLSVGIETLDDILWDLDQALARGAAA
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=400, Percent_Identity=34.25, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI299473759, Length=400, Percent_Identity=31, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI25453487, Length=399, Percent_Identity=30.3258145363409, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI1790375, Length=412, Percent_Identity=31.3106796116505, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI1789383, Length=439, Percent_Identity=26.879271070615, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71980708, Length=414, Percent_Identity=31.1594202898551, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17560056, Length=422, Percent_Identity=33.6492890995261, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17538055, Length=415, Percent_Identity=33.7349397590361, Blast_Score=198, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6323333, Length=438, Percent_Identity=48.1735159817352, Blast_Score=380, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6319307, Length=421, Percent_Identity=34.4418052256532, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321254, Length=448, Percent_Identity=27.4553571428571, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321170, Length=367, Percent_Identity=23.7057220708447, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321904, Length=427, Percent_Identity=25.5269320843091, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI19922554, Length=430, Percent_Identity=33.2558139534884, Blast_Score=211, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 45976; Mature: 45844
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDHRFGIESLCLHAGQQPDAETGARAVPIYQTTSFVFDSPEHAAELFNLQTFGNVYSRI CCCCHHCHHHHHHHCCCCCCCCCCCEEEEEEEECHHEECCHHHHHHHHHHHHHHHHHHHH SNPTVAVFEERMAALEGGRAALATSSGLAAQMTALLTLAQAGDEIVAARTLYGGSYSQLD CCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH VSLRRLGISTVFVDPSDPENFRAAITDRTKAVYGEIIGNPSLNVFDVAAVAAITRAAGVP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC LVIDSTLASPYLCRPLEHGADIVIHSATKYIGGHGTTMGGVLVESGTFPWDNGRFPQMVE EEEECCCCCCHHCCHHHCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC PSPGYHGVRFYETFGNFGFTMKARMETLRTFGQALSPFNAFMLLQGLETLHVRMDRHVAN CCCCCCCEEHEEHHCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH ARAVADFLAAHPAVAWVNYPGLAASPEHALAQRYFPKGPGAILSFGIRGGQPAGERFIEA HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH LQMISHLANVGDAKTLVIHPASTTHRQLSEEEQRAAGVPPDMVRLSVGIETLDDILWDLD HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHH QALARGAAA HHHHCCCCC >Mature Secondary Structure PDHRFGIESLCLHAGQQPDAETGARAVPIYQTTSFVFDSPEHAAELFNLQTFGNVYSRI CCCHHCHHHHHHHCCCCCCCCCCCEEEEEEEECHHEECCHHHHHHHHHHHHHHHHHHHH SNPTVAVFEERMAALEGGRAALATSSGLAAQMTALLTLAQAGDEIVAARTLYGGSYSQLD CCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH VSLRRLGISTVFVDPSDPENFRAAITDRTKAVYGEIIGNPSLNVFDVAAVAAITRAAGVP HHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC LVIDSTLASPYLCRPLEHGADIVIHSATKYIGGHGTTMGGVLVESGTFPWDNGRFPQMVE EEEECCCCCCHHCCHHHCCCCEEEECCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCC PSPGYHGVRFYETFGNFGFTMKARMETLRTFGQALSPFNAFMLLQGLETLHVRMDRHVAN CCCCCCCEEHEEHHCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH ARAVADFLAAHPAVAWVNYPGLAASPEHALAQRYFPKGPGAILSFGIRGGQPAGERFIEA HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHH LQMISHLANVGDAKTLVIHPASTTHRQLSEEEQRAAGVPPDMVRLSVGIETLDDILWDLD HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHHHHHH QALARGAAA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]