Click here to switch to the map view.

The map label for this gene is ycbC [C]

Identifier: 119896762

GI number: 119896762

Start: 508774

End: 509625

Strand: Reverse

Name: ycbC [C]

Synonym: azo0471

Alternate gene names: 119896762

Gene position: 509625-508774 (Counterclockwise)

Preceding gene: 119896771

Following gene: 119896753

Centisome position: 11.65

GC content: 73.94

Gene sequence:

>852_bases
ATGGGCGCGGGGACGCTGAGGAATTGCGCCGATAATACTGGCCCCACCCTCGCCCGCCAAATCCCGATGACTTTCGATTT
TGCGCTGCTGCTGTTCTGGCTGAAGAAACTGGTCGCGGCCTTCGTGCTGCCGCCGCTGCTGCCGCTGGTGCTGGGCGCGG
CCGGGTTGCTACTGCTGCGGCGCCGGCGCCGCCTCGGGCTGGCGCTGGCCTGGAGCGGCATCGCCGCCGGGCTGCTGCTG
AGCACGCCGGCCTCGGTCAGCCGCATGCTGGTGCCGCTGGAGCCCACGGCCGTGGTGGACATGGAAGCGGCGCGCGGCGC
GCAGGCGATCGTCATCCTCGGCGGCGGCCGCCGCAGCCATGCCGCGGAATACGGCGGCGACACGGTGAACCGGCTGACGC
TGGAACGGCTGCGCTACGGCGCCCGGCTGGCACGCGCCACCGGCCTGCCGCTGCTGGTCAGCGGCGGCGCGCCCAGCGGC
GATGTGCCGGAAGCGACGCTGATGGCGGCGGCGCTGCGCGAGGACTTCGGCATCGCCCCGCGCTGGGAGGAAGGCGGCTC
GTTCGATACCCGTGACAACGCGCGCCTGTCGGCAGCGATGCTGCGCGCCGACGGGGTCACGCGGGTGGTGCTGGTGACCC
ACGCCGCGCACATGCGGCGCGCGGAGGCGGAATTCGCCCTGCACGGGCTGGCGGTGGTGCCGGCCCCCACCGCGTGGCTG
GGCCCCGGCCCCGAGCGCGCCGACGACGACGATGAGGTGTGGCCCAGCCTGCCCAGCCAGGGCACGGCCTACGCCGGCTG
GTACGCGCTGCACGAATGGATGGGCCTGCTCGCCTACCGGCTGAGCCGCTGA

Upstream 100 bases:

>100_bases
GGTGGTCTGGTAGATCGGCACCGCGCGCGCGCCGGTTTCGGCGTCGGGCTGCTGGCCGGCGTGCAGGCAAAGGGATTCGA
TGCCGAAGCGATGATCGGGC

Downstream 100 bases:

>100_bases
GCAGCAAGCCGGCCGGCGGCGCGGCGGCTCAGACCCCCTTGAAGCCCGGCTTGCGCTTGCCGAGGAAGGCGGTGACGCCT
TCGGCGAAGTCGGCGGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGAGTLRNCADNTGPTLARQIPMTFDFALLLFWLKKLVAAFVLPPLLPLVLGAAGLLLLRRRRRLGLALAWSGIAAGLLL
STPASVSRMLVPLEPTAVVDMEAARGAQAIVILGGGRRSHAAEYGGDTVNRLTLERLRYGARLARATGLPLLVSGGAPSG
DVPEATLMAAALREDFGIAPRWEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWL
GPGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRLSR

Sequences:

>Translated_283_residues
MGAGTLRNCADNTGPTLARQIPMTFDFALLLFWLKKLVAAFVLPPLLPLVLGAAGLLLLRRRRRLGLALAWSGIAAGLLL
STPASVSRMLVPLEPTAVVDMEAARGAQAIVILGGGRRSHAAEYGGDTVNRLTLERLRYGARLARATGLPLLVSGGAPSG
DVPEATLMAAALREDFGIAPRWEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWL
GPGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRLSR
>Mature_282_residues
GAGTLRNCADNTGPTLARQIPMTFDFALLLFWLKKLVAAFVLPPLLPLVLGAAGLLLLRRRRRLGLALAWSGIAAGLLLS
TPASVSRMLVPLEPTAVVDMEAARGAQAIVILGGGRRSHAAEYGGDTVNRLTLERLRYGARLARATGLPLLVSGGAPSGD
VPEATLMAAALREDFGIAPRWEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWLG
PGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRLSR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 30171; Mature: 30040

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGTLRNCADNTGPTLARQIPMTFDFALLLFWLKKLVAAFVLPPLLPLVLGAAGLLLLR
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRRLGLALAWSGIAAGLLLSTPASVSRMLVPLEPTAVVDMEAARGAQAIVILGGGRRSH
HHHHHCCCEEHHHHHHHHHHCCCHHHHHEEECCCCCEEEECHHCCCCCEEEEEECCCCCH
AAEYGGDTVNRLTLERLRYGARLARATGLPLLVSGGAPSGDVPEATLMAAALREDFGIAP
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
RWEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWL
CCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCC
GPGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRLSR
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GAGTLRNCADNTGPTLARQIPMTFDFALLLFWLKKLVAAFVLPPLLPLVLGAAGLLLLR
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRRRLGLALAWSGIAAGLLLSTPASVSRMLVPLEPTAVVDMEAARGAQAIVILGGGRRSH
HHHHHCCCEEHHHHHHHHHHCCCHHHHHEEECCCCCEEEECHHCCCCCEEEEEECCCCCH
AAEYGGDTVNRLTLERLRYGARLARATGLPLLVSGGAPSGDVPEATLMAAALREDFGIAP
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
RWEEGGSFDTRDNARLSAAMLRADGVTRVVLVTHAAHMRRAEAEFALHGLAVVPAPTAWL
CCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCC
GPGPERADDDDEVWPSLPSQGTAYAGWYALHEWMGLLAYRLSR
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]