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The map label for this gene is ybgF [C]

Identifier: 119896706

GI number: 119896706

Start: 440843

End: 441562

Strand: Reverse

Name: ybgF [C]

Synonym: azo0415

Alternate gene names: 119896706

Gene position: 441562-440843 (Counterclockwise)

Preceding gene: 119896707

Following gene: 119896705

Centisome position: 10.09

GC content: 67.36

Gene sequence:

>720_bases
ATGAAGCGCCTCCTGCCGCTGGCGGCGCTTCTCGCACTGTCTTCGGCCGGGCCCGCCCACGCGGGCCTGTTCGACGACAA
CGAAGCGCGCCGCCAAATCTACGAGATGCGACAGGATCTGGAAAACCGCATCAACGCCAGCCAGGGCAGCCAGCTCGACC
TCGCCAACCAGAACGAGCAGTTGCGCGGTGAAGTCGCCCGCCTGCGCGGCCAGATCGAAGTGCTGATGAACGAAGTCGAA
TCGCTCAAGCAACGCCAGCGCGACTTCTACGTCGACCTCGACAACCGCCTGCGCAAGCTCGAGACCGCGCCGGTGGCGGC
CGAAAGCGCAGCCCCTGCCGCCGATCCGGTTGCCGAATCCACCGAATACGAAGCCGCGCTGAACCTGCTCAAGGGCGGCA
AGCACCGCGATGCGCTGACCGCGTTCGAAGCCTTCCTCGCCAGGCATCCGGCGGGCAGCTTTGCGCCCAGCGCCCATTTC
TGGGCCGGCAACGCGGCGCTGCAGGCCAAGGAAGTCGCGTCCGCGACCACGCATTTCAATGCCGTGCTGGGCAAGTGGCC
CAACGACAGTGTCGCGCCGGATGCGATGCTCGGCCTCGCCAACAGCCAGCAGGCCATGGGCGACGCCAAGACCGCCCAGC
GCACGCTGCAGTCGCTGGTCGAACGCTACCCGAGCAGCAACGCCGCGCAGGCGGCCAAGCAACGTCTCGGCAAGCGCTGA

Upstream 100 bases:

>100_bases
CCGTCAGCCTCGGCGAAGAAAAGCCGCGCTGCACCGAAAGCTCGGAAGCCTGCTTTGCCCAGAACCGCCGCGGCGACATG
CTGTACTCGGGCGAGTTCTG

Downstream 100 bases:

>100_bases
GGAAGCCGCCATGACCGAAGTAGTCCGCCAGCCGGTGAAGCTGCGGCTGACGGAAATCTTCGCCTCCATCCAGGGCGAAT
CGACCCGCGTCGGCCTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKRLLPLAALLALSSAGPAHAGLFDDNEARRQIYEMRQDLENRINASQGSQLDLANQNEQLRGEVARLRGQIEVLMNEVE
SLKQRQRDFYVDLDNRLRKLETAPVAAESAAPAADPVAESTEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHF
WAGNAALQAKEVASATTHFNAVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRLGKR

Sequences:

>Translated_239_residues
MKRLLPLAALLALSSAGPAHAGLFDDNEARRQIYEMRQDLENRINASQGSQLDLANQNEQLRGEVARLRGQIEVLMNEVE
SLKQRQRDFYVDLDNRLRKLETAPVAAESAAPAADPVAESTEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHF
WAGNAALQAKEVASATTHFNAVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRLGKR
>Mature_239_residues
MKRLLPLAALLALSSAGPAHAGLFDDNEARRQIYEMRQDLENRINASQGSQLDLANQNEQLRGEVARLRGQIEVLMNEVE
SLKQRQRDFYVDLDNRLRKLETAPVAAESAAPAADPVAESTEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHF
WAGNAALQAKEVASATTHFNAVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRLGKR

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=194, Percent_Identity=25.2577319587629, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25955; Mature: 25955

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS50293 TPR_REGION ; PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLPLAALLALSSAGPAHAGLFDDNEARRQIYEMRQDLENRINASQGSQLDLANQNEQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LRGEVARLRGQIEVLMNEVESLKQRQRDFYVDLDNRLRKLETAPVAAESAAPAADPVAES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCCCHHCCCCCCCCHHHH
TEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHFWAGNAALQAKEVASATTHFN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
AVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRLGKR
HHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRLLPLAALLALSSAGPAHAGLFDDNEARRQIYEMRQDLENRINASQGSQLDLANQNEQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
LRGEVARLRGQIEVLMNEVESLKQRQRDFYVDLDNRLRKLETAPVAAESAAPAADPVAES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCCCHHCCCCCCCCHHHH
TEYEAALNLLKGGKHRDALTAFEAFLARHPAGSFAPSAHFWAGNAALQAKEVASATTHFN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
AVLGKWPNDSVAPDAMLGLANSQQAMGDAKTAQRTLQSLVERYPSSNAAQAAKQRLGKR
HHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]