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The map label for this gene is cheD [H]

Identifier: 119896695

GI number: 119896695

Start: 427566

End: 428156

Strand: Reverse

Name: cheD [H]

Synonym: azo0404

Alternate gene names: 119896695

Gene position: 428156-427566 (Counterclockwise)

Preceding gene: 119896696

Following gene: 119896694

Centisome position: 9.78

GC content: 67.85

Gene sequence:

>591_bases
GTGACTGATTGGGACCAACTCTCGCCGCAGGAAGTCGAACGTCTGGCGCGCAACATCGGCCCCGGCGAATGGGCGGTGGA
CCGCCAGCGCCCGATCTCCACCCTGCTCGGCTCCTGCGTGGCCGTGTGCATGTTCGACCCGGTCAGCCGGGTGGGCGGTA
TGAACCACTTCATGCTGCCCAACATCCGCCGCAACGACCACCACGCCGACGACGACATGCTGCTGTCGGGCGACTACGCG
ATGGAGGCGCTGCTGAACGGGCTCCTCAACCAGGGCGCGGTGCGCCATCGCGTCCAGGCCAAGGCCTTTGGCGGCGGCAC
CATCATCCACGGCATGACCAGCGCCGGCATCGGCGAGCGCAACGCCGCATTCGCCCGCGAGTGGCTGACGCGCGAGGGTA
TCTCCCTGCAGGCGGAAGACTTCCTCGGCCCGTGGTCGCGCAAGCTGCTGTTCATACCCGCGACCGGCACCGCGTGGTGC
AAGCGCATGCCGACGACGATGACCACGGTGGAGCAGATCGCGCGCGAGGAAGCCGACTACGCCGCCTCGCTGCAGCGCAA
GCCGCCCAAGGGCAACATCGAACTGTTCTGA

Upstream 100 bases:

>100_bases
GGGCGACGAGGACGGCGCGACCAGCGCCGCCTGACCCCGCCTTCACCCGCGCGCCGCGCCCTCCCGCAGGGCCGGCGCCT
GCAGCTGCCCCACCCGTACC

Downstream 100 bases:

>100_bases
CGGCCATGGACAACCCCGGAATCACCGACCGCGAATTCGCGCTGTTCCAGCGCCTCATCTACCGCCTGGCCGGCATCAGC
ATGTCGGATGCCAAGAAGGT

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTDWDQLSPQEVERLARNIGPGEWAVDRQRPISTLLGSCVAVCMFDPVSRVGGMNHFMLPNIRRNDHHADDDMLLSGDYA
MEALLNGLLNQGAVRHRVQAKAFGGGTIIHGMTSAGIGERNAAFAREWLTREGISLQAEDFLGPWSRKLLFIPATGTAWC
KRMPTTMTTVEQIAREEADYAASLQRKPPKGNIELF

Sequences:

>Translated_196_residues
MTDWDQLSPQEVERLARNIGPGEWAVDRQRPISTLLGSCVAVCMFDPVSRVGGMNHFMLPNIRRNDHHADDDMLLSGDYA
MEALLNGLLNQGAVRHRVQAKAFGGGTIIHGMTSAGIGERNAAFAREWLTREGISLQAEDFLGPWSRKLLFIPATGTAWC
KRMPTTMTTVEQIAREEADYAASLQRKPPKGNIELF
>Mature_195_residues
TDWDQLSPQEVERLARNIGPGEWAVDRQRPISTLLGSCVAVCMFDPVSRVGGMNHFMLPNIRRNDHHADDDMLLSGDYAM
EALLNGLLNQGAVRHRVQAKAFGGGTIIHGMTSAGIGERNAAFAREWLTREGISLQAEDFLGPWSRKLLFIPATGTAWCK
RMPTTMTTVEQIAREEADYAASLQRKPPKGNIELF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 21751; Mature: 21620

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDWDQLSPQEVERLARNIGPGEWAVDRQRPISTLLGSCVAVCMFDPVSRVGGMNHFMLP
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NIRRNDHHADDDMLLSGDYAMEALLNGLLNQGAVRHRVQAKAFGGGTIIHGMTSAGIGER
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECCHHCCCCCC
NAAFAREWLTREGISLQAEDFLGPWSRKLLFIPATGTAWCKRMPTTMTTVEQIAREEADY
HHHHHHHHHHHCCCCEEHHHHCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHH
AASLQRKPPKGNIELF
HHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TDWDQLSPQEVERLARNIGPGEWAVDRQRPISTLLGSCVAVCMFDPVSRVGGMNHFMLP
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NIRRNDHHADDDMLLSGDYAMEALLNGLLNQGAVRHRVQAKAFGGGTIIHGMTSAGIGER
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECCHHCCCCCC
NAAFAREWLTREGISLQAEDFLGPWSRKLLFIPATGTAWCKRMPTTMTTVEQIAREEADY
HHHHHHHHHHHCCCCEEHHHHCCCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHH
AASLQRKPPKGNIELF
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA