| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is yhbJ [C]
Identifier: 119896690
GI number: 119896690
Start: 423811
End: 424689
Strand: Direct
Name: yhbJ [C]
Synonym: azo0399
Alternate gene names: 119896690
Gene position: 423811-424689 (Clockwise)
Preceding gene: 119896689
Following gene: 119896691
Centisome position: 9.68
GC content: 68.71
Gene sequence:
>879_bases ATGCAGATCGTACTCATCAGCGGCCTTTCCGGGTCGGGCAAGAGCATCGCCCTCCACGTGCTGGAGGACGCCGGCTACTA CGTCGTCGACAACCTGCCTTCGGCCCTGCTGCTGCAGCTGGTGCTGCACCTGCGCGGGGCCGGCTACCAGCGCGTCGCGG TGGCGGTGGACATGCGTTCCGGCAGCAGCATCGCGGCGCTGCCGGAGCAGGTGGAGTCGCTGCGCGGCATGGTGGACGAC CTGCGCTTCATCTTCCTCGAGGCGCGCGACGACACCTTGATCGCGCGCTTCTCCGAAACCCGCCGCCGTCATCCGCTCGC CGACGAGAACGTGTCGCTCGACGAGGCGATCCAGCGCGAGCGCGACGCGCTCGCCAGCGTGGCCGAACTCGGTCACCGCA TGGACACCAGCGACATCCACGCCAACACGCTGCGCGCCTGGATCAAGGATTTCATCGGCGCCGCCGCCAGCGAAGGGCTG ACGCTGATGTTCCAGTCCTTCGGCTTCAAGTACGGCATCCCGCTCGACGCCGACCTGGTATTCGACGTGCGCTGCCTGCC CAATCCGTACTACGACCCGCTGCTGCGGCCGCTCACCGGGCGCGACCAGGGCGTGATCGACTACCTCGAGAAAGTGCCGG AAGTCGGGCGCATGGCCGAGGACATCCGCCGCTTCGTCGCCGACTGGCTGCCGGCCTACATGCGCGACAACCGCAGCTAT CTCACCGTGGCGATCGGCTGTACCGGGGGCCAGCACCGTTCGGTGTACATGGCGGAATGGCTCGCGCGCCGCTTCGCGGA CCGCGTGCGCGTGATCGTGCGCCACCGTTCCGCGGCGCGGCGGGTGCAGGATGCACCGCCGGCCGTGTCCGGCAAGTGA
Upstream 100 bases:
>100_bases TGAAGGTGAAACGCTGGTACCGGCCTGAGCCCGCGTGGCGGACTGCCCGCGGCGGTGCGCTCGCGCTATAGTTGGTAACA CTTCTCGTTAGCGCGCAGCC
Downstream 100 bases:
>100_bases GACTGGCGGGCGACGCGCGCGCCTGGCTGGCGCTGCTGCGTCCGGGCGACGTGCTGGTGGCCGCGCTCGGACTGCTGGCC TGCGCCGGCTCGGTGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MQIVLISGLSGSGKSIALHVLEDAGYYVVDNLPSALLLQLVLHLRGAGYQRVAVAVDMRSGSSIAALPEQVESLRGMVDD LRFIFLEARDDTLIARFSETRRRHPLADENVSLDEAIQRERDALASVAELGHRMDTSDIHANTLRAWIKDFIGAAASEGL TLMFQSFGFKYGIPLDADLVFDVRCLPNPYYDPLLRPLTGRDQGVIDYLEKVPEVGRMAEDIRRFVADWLPAYMRDNRSY LTVAIGCTGGQHRSVYMAEWLARRFADRVRVIVRHRSAARRVQDAPPAVSGK
Sequences:
>Translated_292_residues MQIVLISGLSGSGKSIALHVLEDAGYYVVDNLPSALLLQLVLHLRGAGYQRVAVAVDMRSGSSIAALPEQVESLRGMVDD LRFIFLEARDDTLIARFSETRRRHPLADENVSLDEAIQRERDALASVAELGHRMDTSDIHANTLRAWIKDFIGAAASEGL TLMFQSFGFKYGIPLDADLVFDVRCLPNPYYDPLLRPLTGRDQGVIDYLEKVPEVGRMAEDIRRFVADWLPAYMRDNRSY LTVAIGCTGGQHRSVYMAEWLARRFADRVRVIVRHRSAARRVQDAPPAVSGK >Mature_292_residues MQIVLISGLSGSGKSIALHVLEDAGYYVVDNLPSALLLQLVLHLRGAGYQRVAVAVDMRSGSSIAALPEQVESLRGMVDD LRFIFLEARDDTLIARFSETRRRHPLADENVSLDEAIQRERDALASVAELGHRMDTSDIHANTLRAWIKDFIGAAASEGL TLMFQSFGFKYGIPLDADLVFDVRCLPNPYYDPLLRPLTGRDQGVIDYLEKVPEVGRMAEDIRRFVADWLPAYMRDNRSY LTVAIGCTGGQHRSVYMAEWLARRFADRVRVIVRHRSAARRVQDAPPAVSGK
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=44.8763250883392, Blast_Score=226, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y399_AZOSB (A1K2G1)
Other databases:
- EMBL: AM406670 - RefSeq: YP_931903.1 - ProteinModelPortal: A1K2G1 - STRING: A1K2G1 - GeneID: 4606383 - GenomeReviews: AM406670_GR - KEGG: azo:azo0399 - eggNOG: COG1660 - HOGENOM: HBG289732 - OMA: GIGCTGG - PhylomeDB: A1K2G1 - ProtClustDB: PRK05416 - BioCyc: ASP62928:AZO0399-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 32627; Mature: 32627
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVLISGLSGSGKSIALHVLEDAGYYVVDNLPSALLLQLVLHLRGAGYQRVAVAVDMRS CEEEEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEECC GSSIAALPEQVESLRGMVDDLRFIFLEARDDTLIARFSETRRRHPLADENVSLDEAIQRE CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RDALASVAELGHRMDTSDIHANTLRAWIKDFIGAAASEGLTLMFQSFGFKYGIPLDADLV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCEE FDVRCLPNPYYDPLLRPLTGRDQGVIDYLEKVPEVGRMAEDIRRFVADWLPAYMRDNRSY EEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LTVAIGCTGGQHRSVYMAEWLARRFADRVRVIVRHRSAARRVQDAPPAVSGK EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQIVLISGLSGSGKSIALHVLEDAGYYVVDNLPSALLLQLVLHLRGAGYQRVAVAVDMRS CEEEEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEECC GSSIAALPEQVESLRGMVDDLRFIFLEARDDTLIARFSETRRRHPLADENVSLDEAIQRE CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH RDALASVAELGHRMDTSDIHANTLRAWIKDFIGAAASEGLTLMFQSFGFKYGIPLDADLV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCEE FDVRCLPNPYYDPLLRPLTGRDQGVIDYLEKVPEVGRMAEDIRRFVADWLPAYMRDNRSY EEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LTVAIGCTGGQHRSVYMAEWLARRFADRVRVIVRHRSAARRVQDAPPAVSGK EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA