Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 119896689

GI number: 119896689

Start: 422821

End: 423738

Strand: Direct

Name: ycbL [C]

Synonym: azo0398

Alternate gene names: 119896689

Gene position: 422821-423738 (Clockwise)

Preceding gene: 119896688

Following gene: 119896690

Centisome position: 9.66

GC content: 72.55

Gene sequence:

>918_bases
TTGAGCGCGCCGCGTCTGCCCGCCAGCGTGCAGGTGTTCGAGCGCGGCTGGCTGTCGGCAAACAATGTGGTGCTGGACGA
TGGCGGCGAGGTCACGCTGATCGACTCCGGCTACGTCACCCACGCCGCGCAGACGCTCGCGCTGGTGGCCGGCGCGCTCG
GCGGCCGGCGGCTGGCGCAGTTGATCAACACCCACTCGCATTCGGACCACATCGGCGGCAACGCCGCCGTGCAGCGCGCG
TTCGGTGGCCGCATCGTGGTGCCGGCCGGCATGGCGGACGCGGTTGAACGCTGGGACGAGGATGCGCTGCTGCTGCGCAC
CGCCGACCAGCGCGGCGAGCGTTTCGCCCACGACGCGGTGCTCACCGCGGGCGACCGCTTCATCGCCGGCGGGCTGGAAT
GGCAGGCGCTCCCCGCTGCAGGCCACGACATGGACGCGCTCGCGTTCTACAACGCGGAACGCCGCATCCTGGTGTCGGGC
GATGCGCTGTGGCGCGACGGCTTCGGCATTCTGTTCGCCGACGTGCTCGGCCGCGGCGATGCCCTCGGCGCGGCGCGCGA
AACGCTCGAAGCCTTCGGCCGGCTTGCGGTCGACGTGGTGATTCCGGGGCACGGCGCCCCCTTCGCCGACGTCGATGGCG
CGCTCGAACGCGCCTTTGCGCGCCTTGCCGCGTTCGAGGCCGACGGCGCCCGGATGGCACGCAACGCGATCCGCGCCTGC
ATCACCTTCCGCCTGCTCGAACACCGGCGCCTCGCGCTCGACGACCTCGCCGCCCATCTCGACGCCACCCCGCTGTACCG
CAGCGCGAACGCGCGCTTCCTCGGTCTGGAGGCGCAGGCGCTCGCCGACTGGCTGGTGGCCGAACTGCTGCGCGCCGGCG
TGGCGCGGCGTGAAGGTGAAACGCTGGTACCGGCCTGA

Upstream 100 bases:

>100_bases
AAGAAATCGAGGGCGTGCCGGTGCCGTCGCCGGCCGAGACGATGCCCGAGGCGGTGCCGCTGCCGCCCAACGTCGCCGCC
CAGGTCGGCGAAGGCAGCGA

Downstream 100 bases:

>100_bases
GCCCGCGTGGCGGACTGCCCGCGGCGGTGCGCTCGCGCTATAGTTGGTAACACTTCTCGTTAGCGCGCAGCCATGCAGAT
CGTACTCATCAGCGGCCTTT

Product: putative beta lactamase

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Hydroxyacylglutathione Hydrolase; Beta Lactamase; Beta Lactamase Protein; Hydrolase Metallo-Beta-Lactamase Superfamily; Beta-Lactamase

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSAPRLPASVQVFERGWLSANNVVLDDGGEVTLIDSGYVTHAAQTLALVAGALGGRRLAQLINTHSHSDHIGGNAAVQRA
FGGRIVVPAGMADAVERWDEDALLLRTADQRGERFAHDAVLTAGDRFIAGGLEWQALPAAGHDMDALAFYNAERRILVSG
DALWRDGFGILFADVLGRGDALGAARETLEAFGRLAVDVVIPGHGAPFADVDGALERAFARLAAFEADGARMARNAIRAC
ITFRLLEHRRLALDDLAAHLDATPLYRSANARFLGLEAQALADWLVAELLRAGVARREGETLVPA

Sequences:

>Translated_305_residues
MSAPRLPASVQVFERGWLSANNVVLDDGGEVTLIDSGYVTHAAQTLALVAGALGGRRLAQLINTHSHSDHIGGNAAVQRA
FGGRIVVPAGMADAVERWDEDALLLRTADQRGERFAHDAVLTAGDRFIAGGLEWQALPAAGHDMDALAFYNAERRILVSG
DALWRDGFGILFADVLGRGDALGAARETLEAFGRLAVDVVIPGHGAPFADVDGALERAFARLAAFEADGARMARNAIRAC
ITFRLLEHRRLALDDLAAHLDATPLYRSANARFLGLEAQALADWLVAELLRAGVARREGETLVPA
>Mature_304_residues
SAPRLPASVQVFERGWLSANNVVLDDGGEVTLIDSGYVTHAAQTLALVAGALGGRRLAQLINTHSHSDHIGGNAAVQRAF
GGRIVVPAGMADAVERWDEDALLLRTADQRGERFAHDAVLTAGDRFIAGGLEWQALPAAGHDMDALAFYNAERRILVSGD
ALWRDGFGILFADVLGRGDALGAARETLEAFGRLAVDVVIPGHGAPFADVDGALERAFARLAAFEADGARMARNAIRACI
TFRLLEHRRLALDDLAAHLDATPLYRSANARFLGLEAQALADWLVAELLRAGVARREGETLVPA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32497; Mature: 32366

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00743 BETA_LACTAMASE_B_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPRLPASVQVFERGWLSANNVVLDDGGEVTLIDSGYVTHAAQTLALVAGALGGRRLAQ
CCCCCCCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH
LINTHSHSDHIGGNAAVQRAFGGRIVVPAGMADAVERWDEDALLLRTADQRGERFAHDAV
HHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
LTAGDRFIAGGLEWQALPAAGHDMDALAFYNAERRILVSGDALWRDGFGILFADVLGRGD
HCCCCEEEECCCCEEECCCCCCCCHHHEEECCCCEEEEECCCEECCCCHHHHHHHHCCCC
ALGAARETLEAFGRLAVDVVIPGHGAPFADVDGALERAFARLAAFEADGARMARNAIRAC
HHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ITFRLLEHRRLALDDLAAHLDATPLYRSANARFLGLEAQALADWLVAELLRAGVARREGE
HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCC
TLVPA
CCCCC
>Mature Secondary Structure 
SAPRLPASVQVFERGWLSANNVVLDDGGEVTLIDSGYVTHAAQTLALVAGALGGRRLAQ
CCCCCCCHHHHHHCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHH
LINTHSHSDHIGGNAAVQRAFGGRIVVPAGMADAVERWDEDALLLRTADQRGERFAHDAV
HHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHCCCCEEEEEECHHHHHHHHHHHH
LTAGDRFIAGGLEWQALPAAGHDMDALAFYNAERRILVSGDALWRDGFGILFADVLGRGD
HCCCCEEEECCCCEEECCCCCCCCHHHEEECCCCEEEEECCCEECCCCHHHHHHHHCCCC
ALGAARETLEAFGRLAVDVVIPGHGAPFADVDGALERAFARLAAFEADGARMARNAIRAC
HHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ITFRLLEHRRLALDDLAAHLDATPLYRSANARFLGLEAQALADWLVAELLRAGVARREGE
HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCC
TLVPA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA