| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is 119896678
Identifier: 119896678
GI number: 119896678
Start: 413530
End: 414396
Strand: Direct
Name: 119896678
Synonym: azo0387
Alternate gene names: NA
Gene position: 413530-414396 (Clockwise)
Preceding gene: 119896677
Following gene: 119896682
Centisome position: 9.45
GC content: 70.13
Gene sequence:
>867_bases ATGGACGTGTCGCGCGACGTGGAAGAGCACATGGGTGGGGCGGGCGGTGGCCCGCCGCCGGACGCGGCGGGGTGGGCAGA TGCGGTGGGCGCCCGTCACGGTCGGGCGGACGCGGGCGCGCGCATTGTGTGCCTGGTTCCGTCCATCACCGAGCTGCTGT TCGACCTTGGCGTGGGCGATCGGCTCGTCGGACGCACCGGGTTCTGCATTCACCCGCGTGACCGGGTGCGCGCGCTGCCC AAGCTGGGTGGGACGAAGGACGTGAAGCTCGACGCGCTGCGCGGGCTCGCGCCCACGCACGTCATCGTCAATATCGACGA GAACCGGCGCGACACGGTGGAGGACATCTCGCGTTTCGTGCCCAACGTGATCGTCACCCATCCGTGCGCCCCGGAAGACA ATCTGGCGCTGTATGCGCTGCTTGGCGGGATATTCGACTGCGAGGCGGCCGCCACCTCGCTCAGCGTCAGCTTGCAGACG GCGCTTGCCGAGGCGGCGGAACTGCGTGCGGCGCTGGTGCCGGAGCGCGTGCTTTACCTGATCTGGCGCGAGCCCTGGAT GACGGTTTCCAGCGCCACCTACATCGCCGCAATGCTCGCCGCCGTGGGCTGGGAGAGCATGCCGCGGGCGCCCGAGCCGC GCTATCCGGTGGTGGACTGGGAGGACGCGTCGATGGCGGACGTCGCGCGCGTGTTCCTGTCGTCGGAACCCTATCGCTTC GGTCCGGCCCATGTGGGCGAGGTCGGCGCGCTGGCGAGCCGGCCGGCGATGCTGATCGATGGCGAGATGTGCTCCTGGTA CGGCAGCCGGGCGATTGCCGGGGTGCGTTACCTCACCGCCTTGCGGCGGCGCCTGGCTAAGGGCTGA
Upstream 100 bases:
>100_bases TGGTGTGCGTTCTGGCGGCGCTGGCCCTGGAGGCGCTGGTCGTTCGCAGGGTGTTCCCGAGCGAGCCGGTGGCGTTGGCA AGCCGGGGCTGAACGCCGGC
Downstream 100 bases:
>100_bases GCGCGCTTCCGTGGTGCGCGGTGCGGTCCGTCTACTGGCACCAGCCGTCAGAGACGAAACGTTCCGGGGTCAGGATGGAG AAGCGCTCACGCACGAGGCG
Product: periplasmic binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MDVSRDVEEHMGGAGGGPPPDAAGWADAVGARHGRADAGARIVCLVPSITELLFDLGVGDRLVGRTGFCIHPRDRVRALP KLGGTKDVKLDALRGLAPTHVIVNIDENRRDTVEDISRFVPNVIVTHPCAPEDNLALYALLGGIFDCEAAATSLSVSLQT ALAEAAELRAALVPERVLYLIWREPWMTVSSATYIAAMLAAVGWESMPRAPEPRYPVVDWEDASMADVARVFLSSEPYRF GPAHVGEVGALASRPAMLIDGEMCSWYGSRAIAGVRYLTALRRRLAKG
Sequences:
>Translated_288_residues MDVSRDVEEHMGGAGGGPPPDAAGWADAVGARHGRADAGARIVCLVPSITELLFDLGVGDRLVGRTGFCIHPRDRVRALP KLGGTKDVKLDALRGLAPTHVIVNIDENRRDTVEDISRFVPNVIVTHPCAPEDNLALYALLGGIFDCEAAATSLSVSLQT ALAEAAELRAALVPERVLYLIWREPWMTVSSATYIAAMLAAVGWESMPRAPEPRYPVVDWEDASMADVARVFLSSEPYRF GPAHVGEVGALASRPAMLIDGEMCSWYGSRAIAGVRYLTALRRRLAKG >Mature_288_residues MDVSRDVEEHMGGAGGGPPPDAAGWADAVGARHGRADAGARIVCLVPSITELLFDLGVGDRLVGRTGFCIHPRDRVRALP KLGGTKDVKLDALRGLAPTHVIVNIDENRRDTVEDISRFVPNVIVTHPCAPEDNLALYALLGGIFDCEAAATSLSVSLQT ALAEAAELRAALVPERVLYLIWREPWMTVSSATYIAAMLAAVGWESMPRAPEPRYPVVDWEDASMADVARVFLSSEPYRF GPAHVGEVGALASRPAMLIDGEMCSWYGSRAIAGVRYLTALRRRLAKG
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30953; Mature: 30953
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVSRDVEEHMGGAGGGPPPDAAGWADAVGARHGRADAGARIVCLVPSITELLFDLGVGD CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCCC RLVGRTGFCIHPRDRVRALPKLGGTKDVKLDALRGLAPTHVIVNIDENRRDTVEDISRFV HHHCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHC PNVIVTHPCAPEDNLALYALLGGIFDCEAAATSLSVSLQTALAEAAELRAALVPERVLYL CCEEEECCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWREPWMTVSSATYIAAMLAAVGWESMPRAPEPRYPVVDWEDASMADVARVFLSSEPYRF EECCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC GPAHVGEVGALASRPAMLIDGEMCSWYGSRAIAGVRYLTALRRRLAKG CCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDVSRDVEEHMGGAGGGPPPDAAGWADAVGARHGRADAGARIVCLVPSITELLFDLGVGD CCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHCCCCC RLVGRTGFCIHPRDRVRALPKLGGTKDVKLDALRGLAPTHVIVNIDENRRDTVEDISRFV HHHCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHC PNVIVTHPCAPEDNLALYALLGGIFDCEAAATSLSVSLQTALAEAAELRAALVPERVLYL CCEEEECCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWREPWMTVSSATYIAAMLAAVGWESMPRAPEPRYPVVDWEDASMADVARVFLSSEPYRF EECCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC GPAHVGEVGALASRPAMLIDGEMCSWYGSRAIAGVRYLTALRRRLAKG CCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA