Click here to switch to the map view.

The map label for this gene is yhdN [H]

Identifier: 119896615

GI number: 119896615

Start: 348990

End: 349301

Strand: Direct

Name: yhdN [H]

Synonym: azo0324

Alternate gene names: 119896615

Gene position: 348990-349301 (Clockwise)

Preceding gene: 119896607

Following gene: 119896616

Centisome position: 7.98

GC content: 71.15

Gene sequence:

>312_bases
ATGTCGCTTTCCGTTTTCGACATTCTCGCCGAACAACGCATCGCCGATGCGCTGCGCCGCGGTGAATTCGACCACCTGCC
CGGGGCGGGGCGGCCGCTGGTGTTCGACGATGAACCGCTGCTGTCGCCGGAGCAGCGCATGGCCAACCACATCCTGAAGA
ACGCCGGCGTCACCCCGCCGGAGATCGGCCTGCGCCGCGAGATCGCCGCACTGCGCGCCCGGCTTGAGACCCTGGACGGC
GAGGCCCGCGCCCGGGCCCGGCGCGAACTCGGGCAGCTGGTGCTGCGGCTGGCGGAACTGCAGCGGCGCTGA

Upstream 100 bases:

>100_bases
GCGCAAAAGAATCCGCGTCCTCCCCCCCGGCGTGTGGACATCCGGCGCGAACGGATCGGCGTAAGCTCGCGCTGTCCGCT
CCAGCCTGCCAGCCGCTGCC

Downstream 100 bases:

>100_bases
GCGGCCGTTTCCGCCCGCGCTGCCTACGAAGCGATACACGGCCAGCCCCTCCGCAGTGCAACAGTGGCACTGTCCACCGA
TATCCTGCCGGAAGGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSLSVFDILAEQRIADALRRGEFDHLPGAGRPLVFDDEPLLSPEQRMANHILKNAGVTPPEIGLRREIAALRARLETLDG
EARARARRELGQLVLRLAELQRR

Sequences:

>Translated_103_residues
MSLSVFDILAEQRIADALRRGEFDHLPGAGRPLVFDDEPLLSPEQRMANHILKNAGVTPPEIGLRREIAALRARLETLDG
EARARARRELGQLVLRLAELQRR
>Mature_102_residues
SLSVFDILAEQRIADALRRGEFDHLPGAGRPLVFDDEPLLSPEQRMANHILKNAGVTPPEIGLRREIAALRARLETLDGE
ARARARRELGQLVLRLAELQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=69, Percent_Identity=46.3768115942029, Blast_Score=65, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 11602; Mature: 11470

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVFDILAEQRIADALRRGEFDHLPGAGRPLVFDDEPLLSPEQRMANHILKNAGVTPP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCC
EIGLRREIAALRARLETLDGEARARARRELGQLVLRLAELQRR
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSVFDILAEQRIADALRRGEFDHLPGAGRPLVFDDEPLLSPEQRMANHILKNAGVTPP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCC
EIGLRREIAALRARLETLDGEARARARRELGQLVLRLAELQRR
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]