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The map label for this gene is pcl [H]

Identifier: 119896551

GI number: 119896551

Start: 287866

End: 289215

Strand: Reverse

Name: pcl [H]

Synonym: azo0260

Alternate gene names: 119896551

Gene position: 289215-287866 (Counterclockwise)

Preceding gene: 119896552

Following gene: 119896550

Centisome position: 6.61

GC content: 74.0

Gene sequence:

>1350_bases
GTGCTGCCCCTCGTCACGCATACCTCCCCGGACGCGGTCGTCGCGCGCCGCCACGGCGAGGCGATCACCGTCCGCCACTT
TCTCGCCGACGTGCGCAAGGTCGCCGCGGCGCTGCCGGCAGGCCGCCACGTGCTCAATGCCTGCACCGACCGCTACCGCT
TCGCGGTGGGCTTCGCCGCGGGCATGGTGGCGGGCAAGATCAGCCTGCTGCCCTCCACCTACACGCCCGACACGCTGCGC
CACCTCGCCGCGTTCGCGCCCGACACCACGGTGCTGACCGACGGAGACGTGGCCGACCTGCCGCTGCCGGCGATGCCCTT
CCCGGCCCTGCTCGACGCCGCCGCGGTGCCGGCCGGCGCGTGCGACATCCCCTGCATCGCCAGCGAACAGCTGGTGGCCT
GGGTGTTCACCTCCGGCTCCACCGGCAGCCCGGTGCCGCATCCCAAGACCTGGGGCCGGCTGGTGGTGAACGTGCAGGCC
GAAGGCGTCGCGCTCGGGCTCGACCCCGCGCACCCGGCGACGCTGGTCGGCACGGTGCCGCCGCAGCACATGTACGGTTT
CGAATCGACCGTGCTGGTCGCGCTGCAGAGCGGCGCGGCGTTCGACGCCGGGCGCCCGTTCTATCCGGCGGACATCGTCG
CCGCGCTGCAACGCGCCCCGGCCCCGGCAGCGCTGGTGACGACCCCGTTCCACCTGCGCACGCTGCTCGACGAAGGCATC
CCCGTGCCGCCCGCCGCGCTGGTGGTCTCGGCCACCGCGCCGCTGCCGGTCGAGCTGGCGGTGGCGGCCGAAGCCGCGTT
CGGCGCGCCGCTGCTGGAAATCTACGGCAGCACCGAAACCGGCCAGATCGCCACCCGGCGCTCGGCGCAGGGCGAGGCGT
GGACGCTGTTCCCCGGCATCGAACTCGCGCCGCGCGACGACGGCCACACTTGGGCCAGCGGCGGCCACATCGAGCGCGCG
GTTCCGATGTCCGACGTCATCGAACAGGTGGGCGCGCGTCGTTTCCTGCTCCGCGGCCGCAATGCCGACCTGGTGAACAT
CGCCGGCAAGCGCACCTCGCTCGGCTATCTCAACCAGCAGCTGCTGTCGATTCCGGGCGTGCGCGACGGCGCCTTCTACC
TGCCGGACGACAGCGGCGGCGCCCACATCGTGCGCCTGGCCGCGTTCGTGGTGGCGCCCACCCTCGACGCCGCCACCCTG
CAGGCCGCACTGCGCGAGCGCATCGACGCGGTCTTCCTGCCGCGCCCGGTGGTGTGGCTGGATGCGCTGCCGCGCAACGC
CACCGGCAAGCTGCCGCGCGAAACCTGCGCCGCGCTGCTCGCCGCCCACGCGGAGCGGCGCGCGCGATGA

Upstream 100 bases:

>100_bases
CCGCCGGGCCTGCGCACCGGCCTGGTGGAGTCGGTGCGCGCCTGCATGCACGCCGGCCGCCGCGCCAGCCCGCCCGCGGC
CTGAACACCCACTGCCCATC

Downstream 100 bases:

>100_bases
GCGGCAGCCGCACCCTGGCGATCGCCGCCGACCATCCCGCGTTCGCCGGCCATTTCCCGGGGCGTCCGATCGTGCCCGGG
GTCGTGCTGCTCGACGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: 4CL; 4-coumaroyl-CoA synthase [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MLPLVTHTSPDAVVARRHGEAITVRHFLADVRKVAAALPAGRHVLNACTDRYRFAVGFAAGMVAGKISLLPSTYTPDTLR
HLAAFAPDTTVLTDGDVADLPLPAMPFPALLDAAAVPAGACDIPCIASEQLVAWVFTSGSTGSPVPHPKTWGRLVVNVQA
EGVALGLDPAHPATLVGTVPPQHMYGFESTVLVALQSGAAFDAGRPFYPADIVAALQRAPAPAALVTTPFHLRTLLDEGI
PVPPAALVVSATAPLPVELAVAAEAAFGAPLLEIYGSTETGQIATRRSAQGEAWTLFPGIELAPRDDGHTWASGGHIERA
VPMSDVIEQVGARRFLLRGRNADLVNIAGKRTSLGYLNQQLLSIPGVRDGAFYLPDDSGGAHIVRLAAFVVAPTLDAATL
QAALRERIDAVFLPRPVVWLDALPRNATGKLPRETCAALLAAHAERRAR

Sequences:

>Translated_449_residues
MLPLVTHTSPDAVVARRHGEAITVRHFLADVRKVAAALPAGRHVLNACTDRYRFAVGFAAGMVAGKISLLPSTYTPDTLR
HLAAFAPDTTVLTDGDVADLPLPAMPFPALLDAAAVPAGACDIPCIASEQLVAWVFTSGSTGSPVPHPKTWGRLVVNVQA
EGVALGLDPAHPATLVGTVPPQHMYGFESTVLVALQSGAAFDAGRPFYPADIVAALQRAPAPAALVTTPFHLRTLLDEGI
PVPPAALVVSATAPLPVELAVAAEAAFGAPLLEIYGSTETGQIATRRSAQGEAWTLFPGIELAPRDDGHTWASGGHIERA
VPMSDVIEQVGARRFLLRGRNADLVNIAGKRTSLGYLNQQLLSIPGVRDGAFYLPDDSGGAHIVRLAAFVVAPTLDAATL
QAALRERIDAVFLPRPVVWLDALPRNATGKLPRETCAALLAAHAERRAR
>Mature_449_residues
MLPLVTHTSPDAVVARRHGEAITVRHFLADVRKVAAALPAGRHVLNACTDRYRFAVGFAAGMVAGKISLLPSTYTPDTLR
HLAAFAPDTTVLTDGDVADLPLPAMPFPALLDAAAVPAGACDIPCIASEQLVAWVFTSGSTGSPVPHPKTWGRLVVNVQA
EGVALGLDPAHPATLVGTVPPQHMYGFESTVLVALQSGAAFDAGRPFYPADIVAALQRAPAPAALVTTPFHLRTLLDEGI
PVPPAALVVSATAPLPVELAVAAEAAFGAPLLEIYGSTETGQIATRRSAQGEAWTLFPGIELAPRDDGHTWASGGHIERA
VPMSDVIEQVGARRFLLRGRNADLVNIAGKRTSLGYLNQQLLSIPGVRDGAFYLPDDSGGAHIVRLAAFVVAPTLDAATL
QAALRERIDAVFLPRPVVWLDALPRNATGKLPRETCAALLAAHAERRAR

Specific function: Converts p-coumaric acid into p-coumaryl CoA. This is necessary for the activation of the photoactive yellow protein (PYP) chromophore [H]

COG id: COG0365

COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012743
- InterPro:   IPR020845
- InterPro:   IPR000873 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.12 [H]

Molecular weight: Translated: 47118; Mature: 47118

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLVTHTSPDAVVARRHGEAITVRHFLADVRKVAAALPAGRHVLNACTDRYRFAVGFAA
CCCCEECCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GMVAGKISLLPSTYTPDTLRHLAAFAPDTTVLTDGDVADLPLPAMPFPALLDAAAVPAGA
HHHHCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
CDIPCIASEQLVAWVFTSGSTGSPVPHPKTWGRLVVNVQAEGVALGLDPAHPATLVGTVP
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCEEEECCC
PQHMYGFESTVLVALQSGAAFDAGRPFYPADIVAALQRAPAPAALVTTPFHLRTLLDEGI
CHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCC
PVPPAALVVSATAPLPVELAVAAEAAFGAPLLEIYGSTETGQIATRRSAQGEAWTLFPGI
CCCCHHEEEECCCCCCEEEEEEHHHHHCCCHHHHCCCCCCCCEEECCCCCCCEEEECCCC
ELAPRDDGHTWASGGHIERAVPMSDVIEQVGARRFLLRGRNADLVNIAGKRTSLGYLNQQ
EECCCCCCCCCCCCCCCEECCCHHHHHHHHCHHEEEHCCCCCCEEEECCCCCHHHHHHHH
LLSIPGVRDGAFYLPDDSGGAHIVRLAAFVVAPTLDAATLQAALRERIDAVFLPRPVVWL
HHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEECCCCEEEE
DALPRNATGKLPRETCAALLAAHAERRAR
ECCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPLVTHTSPDAVVARRHGEAITVRHFLADVRKVAAALPAGRHVLNACTDRYRFAVGFAA
CCCCEECCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
GMVAGKISLLPSTYTPDTLRHLAAFAPDTTVLTDGDVADLPLPAMPFPALLDAAAVPAGA
HHHHCEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
CDIPCIASEQLVAWVFTSGSTGSPVPHPKTWGRLVVNVQAEGVALGLDPAHPATLVGTVP
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCEEEECCC
PQHMYGFESTVLVALQSGAAFDAGRPFYPADIVAALQRAPAPAALVTTPFHLRTLLDEGI
CHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCC
PVPPAALVVSATAPLPVELAVAAEAAFGAPLLEIYGSTETGQIATRRSAQGEAWTLFPGI
CCCCHHEEEECCCCCCEEEEEEHHHHHCCCHHHHCCCCCCCCEEECCCCCCCEEEECCCC
ELAPRDDGHTWASGGHIERAVPMSDVIEQVGARRFLLRGRNADLVNIAGKRTSLGYLNQQ
EECCCCCCCCCCCCCCCEECCCHHHHHHHHCHHEEEHCCCCCCEEEECCCCCHHHHHHHH
LLSIPGVRDGAFYLPDDSGGAHIVRLAAFVVAPTLDAATLQAALRERIDAVFLPRPVVWL
HHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCEEECCCCEEEE
DALPRNATGKLPRETCAALLAAHAERRAR
ECCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA