| Definition | Azoarcus sp. BH72 chromosome, complete genome. |
|---|---|
| Accession | NC_008702 |
| Length | 4,376,040 |
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The map label for this gene is phoB [H]
Identifier: 119896456
GI number: 119896456
Start: 180644
End: 181354
Strand: Direct
Name: phoB [H]
Synonym: azo0164
Alternate gene names: 119896456
Gene position: 180644-181354 (Clockwise)
Preceding gene: 119896452
Following gene: 119896457
Centisome position: 4.13
GC content: 69.62
Gene sequence:
>711_bases ATGCCTGCCAACATTCTTCTGGTCGAGGACGAGCCGGCCATCCAGGAACTGATAGCCGCCAACCTCAGCCGCGCCGGCCA CCACGTGGTGCGTGCGGCTGATGCGGAGGCCGCCCAGCGCCTCGTGCGCGACGCCTTGCCGGACCTCGTGCTGCTGGACT GGATGCTGCCTGGCATGTCGGGTATCGACTTCGCGCGCCGCCTGCGCGCGGAGGAACGCACCCGCGAGATTCCGATCATC ATGCTCACCGCCCGCGGCGAGGAGCAGGACAAGGTCGCCGGCCTCGAGACCGGCGCGGACGACTACATCACCAAGCCGTT CAGCCCGCGCGAACTCGTGGCACGGATCAAGGCGGTGCTGCGCCGCCGGGCTCCCCAGGCGACCGAGGATGCGGTCGAAC TCGGCGGCCTGCGCCTTGATCCCGCCACTCATCGCGTCACCGCGGGTGAGCGGGCGTTGTCGCTCGGGCCCACCGAATTC CGCCTGCTGCACTTCCTGATGACGCACGCCGAACGGGTCCATTCGCGCGCCCAACTGCTCGACCAGGTGTGGGGCGACCA CGTCTTCGTCGAGGAGCGCACGGTCGATGTCCACATCCGCCGCCTGCGCTGCGCGCTCGAGCCGTCCGCCCACGACGCGC TGATCCAGACGGTCCGCGGCAGCGGCTACCGTTTCTCGGCCCAGGTAGACGTCACCTCGGCGACACGCTGA
Upstream 100 bases:
>100_bases GCCACGCCCCGCCGACCGGACCTGTTGCAGCGCGATGACGTGTCATCAAACTTTCAAAGTACTGACATACATTCGTTCGC GGTCAATCGGAGCGAAAAAA
Downstream 100 bases:
>100_bases GCCGTCGTCAGCGTTCTTCGGAGTTCACACCATCCGTTCCACCACCTACATCTGGACCGGCGCACTGTCCCTGCTGCTCG CGCTGCTGGCCGTGGCCGGA
Product: phosphate regulon transcriptional regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPANILLVEDEPAIQELIAANLSRAGHHVVRAADAEAAQRLVRDALPDLVLLDWMLPGMSGIDFARRLRAEERTREIPII MLTARGEEQDKVAGLETGADDYITKPFSPRELVARIKAVLRRRAPQATEDAVELGGLRLDPATHRVTAGERALSLGPTEF RLLHFLMTHAERVHSRAQLLDQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSAQVDVTSATR
Sequences:
>Translated_236_residues MPANILLVEDEPAIQELIAANLSRAGHHVVRAADAEAAQRLVRDALPDLVLLDWMLPGMSGIDFARRLRAEERTREIPII MLTARGEEQDKVAGLETGADDYITKPFSPRELVARIKAVLRRRAPQATEDAVELGGLRLDPATHRVTAGERALSLGPTEF RLLHFLMTHAERVHSRAQLLDQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSAQVDVTSATR >Mature_235_residues PANILLVEDEPAIQELIAANLSRAGHHVVRAADAEAAQRLVRDALPDLVLLDWMLPGMSGIDFARRLRAEERTREIPIIM LTARGEEQDKVAGLETGADDYITKPFSPRELVARIKAVLRRRAPQATEDAVELGGLRLDPATHRVTAGERALSLGPTEFR LLHFLMTHAERVHSRAQLLDQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSAQVDVTSATR
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=62.280701754386, Blast_Score=301, Evalue=3e-83, Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=42.7312775330396, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=41.0480349344978, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=39.2070484581498, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=36.8181818181818, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=39.9122807017544, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=38.7387387387387, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=33.0316742081448, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=40.7894736842105, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1790863, Length=237, Percent_Identity=35.0210970464135, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=36.1607142857143, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI1787229, Length=236, Percent_Identity=33.8983050847458, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=34.8214285714286, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI145693140, Length=235, Percent_Identity=34.468085106383, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=36.1111111111111, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26307; Mature: 26176
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANILLVEDEPAIQELIAANLSRAGHHVVRAADAEAAQRLVRDALPDLVLLDWMLPGMS CCCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCC GIDFARRLRAEERTREIPIIMLTARGEEQDKVAGLETGADDYITKPFSPRELVARIKAVL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHH RRRAPQATEDAVELGGLRLDPATHRVTAGERALSLGPTEFRLLHFLMTHAERVHSRAQLL HHCCCCCHHHHHHHCCEEECCCHHEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSAQVDVTSATR HHHCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC >Mature Secondary Structure PANILLVEDEPAIQELIAANLSRAGHHVVRAADAEAAQRLVRDALPDLVLLDWMLPGMS CCCEEEECCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCCC GIDFARRLRAEERTREIPIIMLTARGEEQDKVAGLETGADDYITKPFSPRELVARIKAVL HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHH RRRAPQATEDAVELGGLRLDPATHRVTAGERALSLGPTEFRLLHFLMTHAERVHSRAQLL HHCCCCCHHHHHHHCCEEECCCHHEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DQVWGDHVFVEERTVDVHIRRLRCALEPSAHDALIQTVRGSGYRFSAQVDVTSATR HHHCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]