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The map label for this gene is atpH

Identifier: 119896448

GI number: 119896448

Start: 173756

End: 174289

Strand: Direct

Name: atpH

Synonym: azo0156

Alternate gene names: 119896448

Gene position: 173756-174289 (Clockwise)

Preceding gene: 119896447

Following gene: 119896449

Centisome position: 3.97

GC content: 64.79

Gene sequence:

>534_bases
ATGGCCGAGAACGTCACCATCGCGCGCCCTTATGCGGATGCCGCCTTCGAGCTGGCCCGCGGGGCAGGTGCGCTGGGGCC
TTGGTCGGAAGCACTGGATCGGCTCGCCGCTGTGGCGGCCGATTCTTCCATGCGGGCGTGTATCAACGATCCCAAGCTTT
CCGCTGACCAGCTCAACACGCTGGTGCAGGAAGTCGGTGGGAACCTGACCGCCGAGCAGCAGAACTTCGTCCGCGTCCTC
GTGGATAACGAACGTCTGCAGGTGCTTCCGGAGATCCGTGACCTGTTCGTTGCTCTGAAGAACGAACACGAAGGCGTCCT
GGAGGCTGAAATCGCCTCCGCCTTCCCCCTCGACGATGCCGCGCTGGCTGCACTGAAGGCCGACCTGGAAGCCCGCTTCC
AGGCCCGCCTGAACGTGACCGTCAGCATCGACCCCGAACTCATCGGTGGGGTCCGCATCGCCGTCGGCGACGAAGTGATC
GACGCCTCGGTCCGCGGCAAGCTCGCGAACATGGCCGCTGCGCTCAAGAACTAG

Upstream 100 bases:

>100_bases
TCTGGCTGTTGCCGGCGCGGAAAAGATCCTGCGTCGCGAAATCAACGCCCAGGTGCACGCCGAGCTGCTTGCCAACCTGA
AACAGGAACTGCAATAAGTC

Downstream 100 bases:

>100_bases
GAGTTATCGCAAAATGCAACTCAACCCCTCTGAAATCAGTGATCTGATTAAGAGCCGGATTCAGAACCTGCAGCTCGCCG
CCACGTCGCGCAACGAGGGT

Product: putative ATP synthase delta chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAENVTIARPYADAAFELARGAGALGPWSEALDRLAAVAADSSMRACINDPKLSADQLNTLVQEVGGNLTAEQQNFVRVL
VDNERLQVLPEIRDLFVALKNEHEGVLEAEIASAFPLDDAALAALKADLEARFQARLNVTVSIDPELIGGVRIAVGDEVI
DASVRGKLANMAAALKN

Sequences:

>Translated_177_residues
MAENVTIARPYADAAFELARGAGALGPWSEALDRLAAVAADSSMRACINDPKLSADQLNTLVQEVGGNLTAEQQNFVRVL
VDNERLQVLPEIRDLFVALKNEHEGVLEAEIASAFPLDDAALAALKADLEARFQARLNVTVSIDPELIGGVRIAVGDEVI
DASVRGKLANMAAALKN
>Mature_176_residues
AENVTIARPYADAAFELARGAGALGPWSEALDRLAAVAADSSMRACINDPKLSADQLNTLVQEVGGNLTAEQQNFVRVLV
DNERLQVLPEIRDLFVALKNEHEGVLEAEIASAFPLDDAALAALKADLEARFQARLNVTVSIDPELIGGVRIAVGDEVID
ASVRGKLANMAAALKN

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=177, Percent_Identity=32.2033898305085, Blast_Score=98, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71984717, Length=170, Percent_Identity=26.4705882352941, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71984710, Length=170, Percent_Identity=26.4705882352941, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_AZOSB (A1K1R9)

Other databases:

- EMBL:   AM406670
- RefSeq:   YP_931661.1
- ProteinModelPortal:   A1K1R9
- SMR:   A1K1R9
- STRING:   A1K1R9
- GeneID:   4608371
- GenomeReviews:   AM406670_GR
- KEGG:   azo:azo0156
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   FIAICGE
- PhylomeDB:   A1K1R9
- ProtClustDB:   CLSK766590
- BioCyc:   ASP62928:AZO0156-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 18804; Mature: 18672

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENVTIARPYADAAFELARGAGALGPWSEALDRLAAVAADSSMRACINDPKLSADQLNT
CCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHH
LVQEVGGNLTAEQQNFVRVLVDNERLQVLPEIRDLFVALKNEHEGVLEAEIASAFPLDDA
HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
ALAALKADLEARFQARLNVTVSIDPELIGGVRIAVGDEVIDASVRGKLANMAAALKN
HHHHHHHHHHHHEEEEEEEEEEECHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AENVTIARPYADAAFELARGAGALGPWSEALDRLAAVAADSSMRACINDPKLSADQLNT
CCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHH
LVQEVGGNLTAEQQNFVRVLVDNERLQVLPEIRDLFVALKNEHEGVLEAEIASAFPLDDA
HHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHH
ALAALKADLEARFQARLNVTVSIDPELIGGVRIAVGDEVIDASVRGKLANMAAALKN
HHHHHHHHHHHHEEEEEEEEEEECHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA