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The map label for this gene is hyaC [C]

Identifier: 119896381

GI number: 119896381

Start: 105090

End: 105788

Strand: Direct

Name: hyaC [C]

Synonym: azo0089

Alternate gene names: 119896381

Gene position: 105090-105788 (Clockwise)

Preceding gene: 119896380

Following gene: 119896383

Centisome position: 2.4

GC content: 70.1

Gene sequence:

>699_bases
ATGAACAAGAAGCTGATCCGGGTGTGGGACCTCCCCACGCGTCTGTTCCACTGGCTGCTGCTCGCGCTCGTGGTGGCTGC
CTTCGTCACCGGGATGATCGGCGGCAACTTCATCGTCTGGCACGGCTGGCTGGGCATCGCCATCTCCGGCCTGCTGGCGT
TCCGCCTGACCTGGGGGCTGGTCGGTTCCACCTATGCGCGCTTCGCGCACTTCGTGCCCGGCCCGCAGCGCATCCTCGCC
TATCTGCGCGGCCACTGGCGCGGCGTCGGCCACAATCCGCTCGGCGCGCTGTCGGTGCTGGCGCTGCTCGGCGTGCTCGC
GTTCCAGGTGGGCAGCGGGCTGGTCGCCAACGACGACATCGCCTTCAGCGGCCCGCTCGCGCCGCTGGTGTCCGAGGAGG
TCGGGGCCTGGCTTACCGGCCTGCATCGCCAGAACATATGGGTGATCCTCGCGCTGGTCGGCCTGCACGTCGGCGCCATC
GTGTTCTATGTGCGCGCGAAGAAGGACAACCTGGTCAAGCCGATGATCACCGGGATGAAGGAAGTCGCCGACGGCGGCGT
CAAGTCGGCTGAAGGCGGCGGGGTGATTCCCTTCGTGATCGCGCTGGCGGTGGCCGCAGCGGTGGTCTGGGTTACCGCGG
GTGGGCTGGTGCCGCCCCCGCCGCCGCCCGCCCCGGCGGAGGCCGCGCCCGCCTGGTGA

Upstream 100 bases:

>100_bases
TCTGCGCGAATTCCTCGCCAGCCGCGCGGCGGCTGCGGAACCTAACCCGGCCTAGGCCGGTCTGTGCTGCGTTTTGCCTT
TGTCCGACTGGAATGCATCA

Downstream 100 bases:

>100_bases
GCGTCCAACCATAAAAAAAGCGCCGGGGGATGCCCGGCGCTTCTTGTTTGTGACCGCGGACTTACTCTTCGCGGTACTGG
TCGTGACAGGCCTTGCAGGT

Product: hydrogenase cytochrome b-type subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; B-Type Cytochrome; Hydrogenase Cytochrome B-Type Subunit; Cytochrome B/B6 Domain; Hydrogenase Cytochrome B-Type; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNKKLIRVWDLPTRLFHWLLLALVVAAFVTGMIGGNFIVWHGWLGIAISGLLAFRLTWGLVGSTYARFAHFVPGPQRILA
YLRGHWRGVGHNPLGALSVLALLGVLAFQVGSGLVANDDIAFSGPLAPLVSEEVGAWLTGLHRQNIWVILALVGLHVGAI
VFYVRAKKDNLVKPMITGMKEVADGGVKSAEGGGVIPFVIALAVAAAVVWVTAGGLVPPPPPPAPAEAAPAW

Sequences:

>Translated_232_residues
MNKKLIRVWDLPTRLFHWLLLALVVAAFVTGMIGGNFIVWHGWLGIAISGLLAFRLTWGLVGSTYARFAHFVPGPQRILA
YLRGHWRGVGHNPLGALSVLALLGVLAFQVGSGLVANDDIAFSGPLAPLVSEEVGAWLTGLHRQNIWVILALVGLHVGAI
VFYVRAKKDNLVKPMITGMKEVADGGVKSAEGGGVIPFVIALAVAAAVVWVTAGGLVPPPPPPAPAEAAPAW
>Mature_232_residues
MNKKLIRVWDLPTRLFHWLLLALVVAAFVTGMIGGNFIVWHGWLGIAISGLLAFRLTWGLVGSTYARFAHFVPGPQRILA
YLRGHWRGVGHNPLGALSVLALLGVLAFQVGSGLVANDDIAFSGPLAPLVSEEVGAWLTGLHRQNIWVILALVGLHVGAI
VFYVRAKKDNLVKPMITGMKEVADGGVKSAEGGGVIPFVIALAVAAAVVWVTAGGLVPPPPPPAPAEAAPAW

Specific function: Probable B-Type Cytochrome. [C]

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24502; Mature: 24502

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLIRVWDLPTRLFHWLLLALVVAAFVTGMIGGNFIVWHGWLGIAISGLLAFRLTWGL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH
VGSTYARFAHFVPGPQRILAYLRGHWRGVGHNPLGALSVLALLGVLAFQVGSGLVANDDI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCC
AFSGPLAPLVSEEVGAWLTGLHRQNIWVILALVGLHVGAIVFYVRAKKDNLVKPMITGMK
CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
EVADGGVKSAEGGGVIPFVIALAVAAAVVWVTAGGLVPPPPPPAPAEAAPAW
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKKLIRVWDLPTRLFHWLLLALVVAAFVTGMIGGNFIVWHGWLGIAISGLLAFRLTWGL
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH
VGSTYARFAHFVPGPQRILAYLRGHWRGVGHNPLGALSVLALLGVLAFQVGSGLVANDDI
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCC
AFSGPLAPLVSEEVGAWLTGLHRQNIWVILALVGLHVGAIVFYVRAKKDNLVKPMITGMK
CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHH
EVADGGVKSAEGGGVIPFVIALAVAAAVVWVTAGGLVPPPPPPAPAEAAPAW
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA