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The map label for this gene is 119896343

Identifier: 119896343

GI number: 119896343

Start: 57268

End: 58020

Strand: Reverse

Name: 119896343

Synonym: azo0051

Alternate gene names: NA

Gene position: 58020-57268 (Counterclockwise)

Preceding gene: 119896345

Following gene: 119896342

Centisome position: 1.33

GC content: 68.13

Gene sequence:

>753_bases
GTGGAATTAGCGCACCAGCGGCGATGTCGATGCAAGAGGGGTATGCCGTCCGACATGCACCGGGGCCGCGGGGCGGCGCC
CCAGGGCCCGGCGGCGGCGGGACTGCGGTGGCGCCGTGCCACCGTGCCGCCGCCCGTCATGACACCGCCTTACAATCACG
GCCTTGCGGCGTTCCCGCCGGCTTTTCGTGAGTGCGTCATGAAGCAACTGCTGCCCGCCTGGGCCGACCCCTGGTTGGAC
CTGATCCACCTCGGCCTGCAGATCGCGCTGATCCTGTTCGGCGCGGCGCTGCTGCGGATGGTGCTGCGGCGGCTGCTGCG
GCGGCTGGGTGAGCATTACAACCTGCCGCCCGAACTGGTGATCGGCGCGCGGCGGACGATCAGCTTCGTCATCTACAGCG
GTGCGCTGCTGCTGGTGCTGGACCGCTTCGGGGTGTCGGGCACGGTGCTGTGGACCGCCTTCACCGGTTTTGCCGCAGTC
GCCGCGGTGGCCTTCTTCGCGGCCTGGAGCGTGCTCTCCAACATCTTCTGCACGCTGCTGATCTTCACCACGCGGCCGTT
CCGCCTCTACGACCACATCGAACTGCTGGAGAACGGCGAAAAGCCGGGGCTGAAGGGCCAGGTGGTGGACATCAACCTGA
TCTACACCACGCTTCAGGAAAGCGCCGGCGAGCACGGCGACACCGTGCTGCAGGTGCCCAACAGCCTGTTCTTCCAGCGC
TGCCTGCGGCGCTGGCGCGGCAATCCCGGCTGA

Upstream 100 bases:

>100_bases
CGGCCAGCGCCAGGCAGGCGCCGGCCAGGCCGAGCAGACGAAGCCAGCGCGGCATGCGGATGTCCTCGTTGTCGATGCGC
CGCGCGGTCTGGCGGCGCGG

Downstream 100 bases:

>100_bases
GGCGGGCGGCCGCGGCCCGCCACGGGCGATTTTCTCCGCTGCGCTGGCTATGCTTATGACAATGCGTTTCGCATTTTGCG
CATTGCATCCGGGCAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Small-Conductance Mechanosensitive Channel Protein; Small-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MELAHQRRCRCKRGMPSDMHRGRGAAPQGPAAAGLRWRRATVPPPVMTPPYNHGLAAFPPAFRECVMKQLLPAWADPWLD
LIHLGLQIALILFGAALLRMVLRRLLRRLGEHYNLPPELVIGARRTISFVIYSGALLLVLDRFGVSGTVLWTAFTGFAAV
AAVAFFAAWSVLSNIFCTLLIFTTRPFRLYDHIELLENGEKPGLKGQVVDINLIYTTLQESAGEHGDTVLQVPNSLFFQR
CLRRWRGNPG

Sequences:

>Translated_250_residues
MELAHQRRCRCKRGMPSDMHRGRGAAPQGPAAAGLRWRRATVPPPVMTPPYNHGLAAFPPAFRECVMKQLLPAWADPWLD
LIHLGLQIALILFGAALLRMVLRRLLRRLGEHYNLPPELVIGARRTISFVIYSGALLLVLDRFGVSGTVLWTAFTGFAAV
AAVAFFAAWSVLSNIFCTLLIFTTRPFRLYDHIELLENGEKPGLKGQVVDINLIYTTLQESAGEHGDTVLQVPNSLFFQR
CLRRWRGNPG
>Mature_250_residues
MELAHQRRCRCKRGMPSDMHRGRGAAPQGPAAAGLRWRRATVPPPVMTPPYNHGLAAFPPAFRECVMKQLLPAWADPWLD
LIHLGLQIALILFGAALLRMVLRRLLRRLGEHYNLPPELVIGARRTISFVIYSGALLLVLDRFGVSGTVLWTAFTGFAAV
AAVAFFAAWSVLSNIFCTLLIFTTRPFRLYDHIELLENGEKPGLKGQVVDINLIYTTLQESAGEHGDTVLQVPNSLFFQR
CLRRWRGNPG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27936; Mature: 27936

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS00064 L_LDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCC
>Mature Secondary Structure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HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA