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The map label for this gene is yddH [H]

Identifier: 119896317

GI number: 119896317

Start: 28052

End: 28618

Strand: Direct

Name: yddH [H]

Synonym: azo0025

Alternate gene names: 119896317

Gene position: 28052-28618 (Clockwise)

Preceding gene: 119896316

Following gene: 119896319

Centisome position: 0.64

GC content: 70.19

Gene sequence:

>567_bases
ATGACCCCACCCCACACCCTCCCCGTCCCCCTCGAAAAGTCCTACCGCCTGATCAACCACGGCCCCACGGTGCTGGTGGC
CAGCGCCCACGGCGGTCGCCGCAATGTCATGGCCGCCGCCTGGAACATGCCGCTGGATTTCGCCCCGCCCAAGGTCGCGG
TGGTGATCGACAAGGCCACCTACAGCCGCGGGCTGATCGAGGCCTCGGGGGAGTTCGTGCTGGCGGTGCCCACCCGCGCC
GCCGCCGCGCAGGCGTTGGCCACCGGTTCGCGCAGCGGCCGCGACGAGGACAAGTTCGCCGCGCTCGGCATCGAGGCCTA
CAGTGCCGACAAGGTCGGCGCGCCGCTGCCCGGCGGCTGCATCGCCTGGCTGGAATGCCGGGTCATCCCGGAACCACACA
TCCAGCAGACCTACGACCTCTTCCTCGGCGAGGTGGTGGCCGCGCGCGCCGATGCGCGCCTGTTCCGCGACGGCCACTGG
CATTTCGACGAGGCCGGTACGCGCAGCATCCACTACATCGCCGGCGGCAACTTCTTCGCCACCGGCGACGCCTTCACGGT
TGAGTAA

Upstream 100 bases:

>100_bases
TCTCCGTCGTTCAGCAGGCGCCAAGCAGTGCTTGCCAAAATCCCTGCTTCACCCCCTTGAAGGGGAGGGAGCAAACCAAC
GCCCCGCCACCCTCACTCCC

Downstream 100 bases:

>100_bases
GCGGCGCCCGCCTCACTGCGTTTCGAGCAGGCGGCGGAAGTGATCGATGGTGTCGCGCAGGCCGTCCTCCAGCGCGACCC
GCGGCGTCCACGCCAAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MTPPHTLPVPLEKSYRLINHGPTVLVASAHGGRRNVMAAAWNMPLDFAPPKVAVVIDKATYSRGLIEASGEFVLAVPTRA
AAAQALATGSRSGRDEDKFAALGIEAYSADKVGAPLPGGCIAWLECRVIPEPHIQQTYDLFLGEVVAARADARLFRDGHW
HFDEAGTRSIHYIAGGNFFATGDAFTVE

Sequences:

>Translated_188_residues
MTPPHTLPVPLEKSYRLINHGPTVLVASAHGGRRNVMAAAWNMPLDFAPPKVAVVIDKATYSRGLIEASGEFVLAVPTRA
AAAQALATGSRSGRDEDKFAALGIEAYSADKVGAPLPGGCIAWLECRVIPEPHIQQTYDLFLGEVVAARADARLFRDGHW
HFDEAGTRSIHYIAGGNFFATGDAFTVE
>Mature_187_residues
TPPHTLPVPLEKSYRLINHGPTVLVASAHGGRRNVMAAAWNMPLDFAPPKVAVVIDKATYSRGLIEASGEFVLAVPTRAA
AAQALATGSRSGRDEDKFAALGIEAYSADKVGAPLPGGCIAWLECRVIPEPHIQQTYDLFLGEVVAARADARLFRDGHWH
FDEAGTRSIHYIAGGNFFATGDAFTVE

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=183, Percent_Identity=46.448087431694, Blast_Score=180, Evalue=6e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20138; Mature: 20007

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPHTLPVPLEKSYRLINHGPTVLVASAHGGRRNVMAAAWNMPLDFAPPKVAVVIDKAT
CCCCCCCCCCHHHCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCC
YSRGLIEASGEFVLAVPTRAAAAQALATGSRSGRDEDKFAALGIEAYSADKVGAPLPGGC
CCCCEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCE
IAWLECRVIPEPHIQQTYDLFLGEVVAARADARLFRDGHWHFDEAGTRSIHYIAGGNFFA
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHEEECCCEEECCCCCCEEEEEECCCEEE
TGDAFTVE
CCCEEEEC
>Mature Secondary Structure 
TPPHTLPVPLEKSYRLINHGPTVLVASAHGGRRNVMAAAWNMPLDFAPPKVAVVIDKAT
CCCCCCCCCHHHCEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEECCC
YSRGLIEASGEFVLAVPTRAAAAQALATGSRSGRDEDKFAALGIEAYSADKVGAPLPGGC
CCCCEEECCCCEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCE
IAWLECRVIPEPHIQQTYDLFLGEVVAARADARLFRDGHWHFDEAGTRSIHYIAGGNFFA
EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHEEECCCEEECCCCCCEEEEEECCCEEE
TGDAFTVE
CCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]