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The map label for this gene is parB [H]

Identifier: 119776784

GI number: 119776784

Start: 4301388

End: 4302266

Strand: Reverse

Name: parB [H]

Synonym: Sama_3652

Alternate gene names: 119776784

Gene position: 4302266-4301388 (Counterclockwise)

Preceding gene: 119776785

Following gene: 119776783

Centisome position: 99.91

GC content: 51.08

Gene sequence:

>879_bases
ATGACTTTGAAAAAACGGGGCTTGGGTAAAGGATTGGATGCACTGCTGAGCACCAGCCATGCCGCCAGTAGAAAACTGGA
ACAGGAAGCCGCCCGGGCCGACAAACAGGACGACCTGGTGCACCTGGATGTGGATTTGCTGCAACCCGGCAAGTACCAGC
CCCGTAAGGATATGTCACCAGAGGCCTTGGAAGAACTGGCCGAGTCCATTCGTGCCCAGGGCATCATTCAGCCCATAGTG
GTGCGCAAGGTCGCCGAACAAAAGTACGAAATCATTGCCGGTGAACGTCGCTGGCGTGCCTCACAGTTGGCCAAGCTTGA
GAAAGTCCCCTGTATCATCAAGCAGGTGCCTGACGAATCAGCAGTGGCCATTGCCCTGATTGAAAACATCCAGCGTGAAG
ATCTCAATGCCATGGAAGAAGCCATTGCCTTGCATCGTCTGTTGGAAGAATTTGAACTCACCCACCAGCAGGTGGCCGAT
GCGGTAGGTAAATCCCGCACCACAGTCACTAACCTGCTGCGTCTCAATAGTCTGAATGAACCCGTTAAGCGTTTGCTTGA
ATATGGCGATATCGACATGGGCCACGCCCGTGCGCTGCTTGCCGTAGAGGGAGAAGAACAGACAAATCTGGCACGTTTAG
TTGCCGCCAAAGAGCTCACCGTTCGGGAAACTGAACGATTAATTAATAGAACCTTAAATCCCGCTAAAGAAGCAGAAAAA
CCGGTAAAAGATCACGATGTAAGCCGTCTGGAGCAGCAGTTGATTGAAAAGCTGGGCGCCAAGGTTTCCATTGCTCATGG
CAGTAAGGGCAAGGGAAAAATTGTAATTAACTACCAAAATCTCGCTGAATTAGACGGTATTCTCAGTAAAATCCGCTGA

Upstream 100 bases:

>100_bases
CAAGTCCAGTGCCGGCGCCAAGGCCTACCTGGCCCTGGCCGGAGAGATTATTCGCCGGGGTGAGCAAACCCAGGCTAAAA
AGCAGGCGTAAGGATTAGCA

Downstream 100 bases:

>100_bases
TTCCGGGCAGTTAACAGAGTTTCATGTAAATTTGTGACGAATGTTAATCTTTGCTTTTTGAATCTTTGGTCGTAGAACCA
TTGAAAAGTGGCGATTTTAC

Product: ParB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTLKKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSPEALEELAESIRAQGIIQPIV
VRKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDESAVAIALIENIQREDLNAMEEAIALHRLLEEFELTHQQVAD
AVGKSRTTVTNLLRLNSLNEPVKRLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEK
PVKDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKIR

Sequences:

>Translated_292_residues
MTLKKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSPEALEELAESIRAQGIIQPIV
VRKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDESAVAIALIENIQREDLNAMEEAIALHRLLEEFELTHQQVAD
AVGKSRTTVTNLLRLNSLNEPVKRLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEK
PVKDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKIR
>Mature_291_residues
TLKKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSPEALEELAESIRAQGIIQPIVV
RKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDESAVAIALIENIQREDLNAMEEAIALHRLLEEFELTHQQVADA
VGKSRTTVTNLLRLNSLNEPVKRLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEKP
VKDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKIR

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32576; Mature: 32445

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCH
EALEELAESIRAQGIIQPIVVRKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHCCCCH
AVAIALIENIQREDLNAMEEAIALHRLLEEFELTHQQVADAVGKSRTTVTNLLRLNSLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
PVKRLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEK
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PVKDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKIR
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLKKRGLGKGLDALLSTSHAASRKLEQEAARADKQDDLVHLDVDLLQPGKYQPRKDMSP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCH
EALEELAESIRAQGIIQPIVVRKVAEQKYEIIAGERRWRASQLAKLEKVPCIIKQVPDES
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHCCCCH
AVAIALIENIQREDLNAMEEAIALHRLLEEFELTHQQVADAVGKSRTTVTNLLRLNSLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
PVKRLLEYGDIDMGHARALLAVEGEEQTNLARLVAAKELTVRETERLINRTLNPAKEAEK
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
PVKDHDVSRLEQQLIEKLGAKVSIAHGSKGKGKIVINYQNLAELDGILSKIR
CCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]