| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is atpI [H]
Identifier: 119776783
GI number: 119776783
Start: 4300780
End: 4301163
Strand: Reverse
Name: atpI [H]
Synonym: Sama_3651
Alternate gene names: 119776783
Gene position: 4301163-4300780 (Counterclockwise)
Preceding gene: 119776784
Following gene: 119776782
Centisome position: 99.88
GC content: 50.52
Gene sequence:
>384_bases TTGAGCAAGGTTTTGGCGCGTCGTGGCCGTTGGTCTGCCTATAAATTGGTGTTGATGCAGGCGGCGATAGCCGGGGGTGC GTCAGTTCTCTTCTTCGTCGTCTGGGGAGCGCAATACGGGGTATCGGCTTTAGCCGGTGCTGCGATAGCTGTGCTCCCTA ATTTTGTATTCGCAACCCTCGCTTTTTCCCATTCGGGAGCAAGTGCAGCAGGGAAGGTACTGAAAACCTTCTACTGGGGG GAAGCGGTAAAGTTGCTGTTAACCATTGCCCTGTTTTCGTTGGTGTTTATCAATTTGAAAATCGTCTTTATGCCGCTTTT CGTTTGCTACTCACTGGCACTCCTGGTGCATTGGACAGCGCCTTTATACTTCAAGCAAAAGTAA
Upstream 100 bases:
>100_bases CCGAAAAGGTATACTTTCGCAAGCTTTTTGTACTGTGACTTTTTACGGCATTTTGTTGTCCGGTCACAGAAACAAAAAGT CCGAATGCGGAGAATGAGAA
Downstream 100 bases:
>100_bases AGTGGGATGAATCATGGCTGCAACTGGTGAAGCGTTAACACCGCAGGGCTATATCCAGCATCACCTGACCAACCTTTCCG TTGGTGAAGGATTCTGGACA
Product: ATP synthase protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSKVLARRGRWSAYKLVLMQAAIAGGASVLFFVVWGAQYGVSALAGAAIAVLPNFVFATLAFSHSGASAAGKVLKTFYWG EAVKLLLTIALFSLVFINLKIVFMPLFVCYSLALLVHWTAPLYFKQK
Sequences:
>Translated_127_residues MSKVLARRGRWSAYKLVLMQAAIAGGASVLFFVVWGAQYGVSALAGAAIAVLPNFVFATLAFSHSGASAAGKVLKTFYWG EAVKLLLTIALFSLVFINLKIVFMPLFVCYSLALLVHWTAPLYFKQK >Mature_126_residues SKVLARRGRWSAYKLVLMQAAIAGGASVLFFVVWGAQYGVSALAGAAIAVLPNFVFATLAFSHSGASAAGKVLKTFYWGE AVKLLLTIALFSLVFINLKIVFMPLFVCYSLALLVHWTAPLYFKQK
Specific function: A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex [H]
COG id: COG3312
COG function: function code C; F0F1-type ATP synthase, subunit I
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial AtpI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005598 [H]
Pfam domain/function: PF03899 ATP_synt_I [H]
EC number: NA
Molecular weight: Translated: 13794; Mature: 13663
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVLARRGRWSAYKLVLMQAAIAGGASVLFFVVWGAQYGVSALAGAAIAVLPNFVFATL CCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSHSGASAAGKVLKTFYWGEAVKLLLTIALFSLVFINLKIVFMPLFVCYSLALLVHWTA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLYFKQK CEEEECC >Mature Secondary Structure SKVLARRGRWSAYKLVLMQAAIAGGASVLFFVVWGAQYGVSALAGAAIAVLPNFVFATL CCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFSHSGASAAGKVLKTFYWGEAVKLLLTIALFSLVFINLKIVFMPLFVCYSLALLVHWTA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLYFKQK CEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]