Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776768

Identifier: 119776768

GI number: 119776768

Start: 4285619

End: 4285816

Strand: Direct

Name: 119776768

Synonym: Sama_3636

Alternate gene names: NA

Gene position: 4285619-4285816 (Clockwise)

Preceding gene: 119776767

Following gene: NA

Centisome position: 99.52

GC content: 50.51

Gene sequence:

>198_bases
ATGTTAAAGACCATGACCTTTGCCGTGCTGCACTTTGGTGTGGCCTTCAGCATCACGTATTTACTCACCGGCAGCCTGCT
TATCGGGGGCGCTGTCGCCCTGATTGAGCCAACCATAAATACCGTGGTGTTCTACTTCCATGAAAAAGTCTGGAAGCGCA
TAGAGGCAAAAAAGCAGCTACCACAACTACTCGCCTGA

Upstream 100 bases:

>100_bases
CTTAATCGGCTGCCTCGTTTACCTCAATTGAACAATTCTACTTTACACGTAAGTGATAACTATTATCATTTATGAAAAGT
AATCAATTGGGGATTCCACC

Downstream 100 bases:

>100_bases
CCTCTAAGGCTAGTAGCACTCAGCTCAGGTTCTCCTCGCACTATCTCTAATTGCCCATCCCCATATTGATGACCGGAGGC
TCAGTCTGACTACCTGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA

Sequences:

>Translated_65_residues
MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA
>Mature_65_residues
MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQLPQLLA

Specific function: Unknown

COG id: COG3205

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7280; Mature: 7280

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PQLLA
HHHCC
>Mature Secondary Structure
MLKTMTFAVLHFGVAFSITYLLTGSLLIGGAVALIEPTINTVVFYFHEKVWKRIEAKKQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
PQLLA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA