| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cusB [H]
Identifier: 119776606
GI number: 119776606
Start: 4102477
End: 4104057
Strand: Direct
Name: cusB [H]
Synonym: Sama_3474
Alternate gene names: 119776606
Gene position: 4102477-4104057 (Clockwise)
Preceding gene: 119776605
Following gene: 119776607
Centisome position: 95.27
GC content: 56.04
Gene sequence:
>1581_bases ATGAACACGAAAAAGCAAAAAAGTGCCCTGCTGCTGATGGGTGCCAGTCTGGCATTCGGTCCCGGCATGCCTGCCATGGT ATTGGCTGAAAGCCCACAGCAGTCTCCCGCATCGGAGGCCGCAGCAGCCGCCGTTTATCACTGCCCCATGCATCCCGAGG TAGAAAGCCACGAGCCGGGGCGCTGTCCCAAGTGCAAGATGTTTCTGGTACCCGGTGCAGGCATCTCTGGCCAGTCCAGC GAGCCCTTGGCTGAGGCGCACAAGACCTATATTTGCCCCATGCATCCCGAAGTGGAAAGTCATGAACCCGGCCGTTGTCC CAAGTGCAACATGTTCCTCGTTGAAAAAGAAGAGGAAGAAGAGGCTGACCCTCAGCCAGAGCATAAGTCGACGGAAGATC ACAGCGCCCATCTGGCCGCACAAAACGATATTTTCGCCACCCCTGCAGCCAGTCCAATCGACGGTGGCAAGGTCAAATAT GTGTGCCCCATGCACGCCCATATCATCAGCGATGAGCCCGGCACCTGCCCCATCTGCGGTATGGACCTCGAGAAGGTAGA ACTCGGCGGGGGCCAGGAGGTTCTGGTCGACGTATCCGGTGGCATGCAGCAGGCACTGGCGCTCAGGGTTGCCAAAGCCG AACGCCAAACCCTGTGGAAATTTGTCGATACCGTTGGCCAAATCGAATACGACGAGCGCCAAATCCACCATGTGCACGCC CGCCTGAACGGTTGGATTGAAACCCTCAAGGTCAATGCCGTTGGTGACAAAGTCAGTAAAGGGCAATTGCTGTACGAAAT CTATTCGCCGGATCTGGTTAACGCTCAGGATGACTATCTGCTTGCACTGGATACCGTTAAAAAATCCGGTGATTCAGGTC GTTACAAAGAGTTGCTGCGAAAAGCCAGTCTGCGACTTGAACTGCTCGGCATGAATGAGGCGCAAATCAAAGAGCTTGCC AAAACCCAAACGACCCAATATCGGGTGCCCTTCTACGCCCGCCAGGATGGGGTGATCACCACCCTGAATACCCGTGAAGG CATGTACATTCAACCCATGAGCGAAGTGCTCGCCCTGACAGACATCAGCAAGGTATGGGTCATAGCCGACGTATTCGAAA ATGAGCAGAGCTGGCTCAAAGTAGGTCAGCCCGCCGAAGTGGCGGTACCTGCCATGGGGCTCAGCGGCATCAAAGGCACC ATAGATTATATTTATCCCGAGCTGGACCCTGTCACCCGCAGCCTGCGGGTACGGGTAGTGCTGGACAACCCAAACCAACA GCTGCGCCCCAATACGCTCGCCAAGGTCAAACTTTATGGCGGGCCCGAGCGAGACGTTCTGACCATTCCCCAGGAAGCGT TGATTCAAACGGGTAAGGAAAACAGGGTGATAGTTCGCACCGCAGATAACAGCTTTGCCGCCCGCCAGGTCACTGTCGGC ATGTATTCCCAGGGCAAGGTTGAGGTGCTGTCTGGTCTGAGTGACGGTGAAGAAGTCGTGACATCCGGGCAGTTTTTGCT GGACTCCGAAGCCAGTCTCAAGGGCAGCCTGATGCGCCTTGGCAGCGGCCATCAGCACTAA
Upstream 100 bases:
>100_bases GAGCCGGTTGCCGCCAAGGGCGAGCACTGCGCCAACTGTCCTAAAAAAGCCATGAACCATCAGCATCACTGACAGGCCAA GGGTGGAAATGAGGTTTACT
Downstream 100 bases:
>100_bases GGAGGCCTTATGTTGGATTACATTATCAAGTCTTCTATCCGCCAGCGATTTATGGTGCTGGTGGTGGCGCTGATGGTGAC CCTTTGGGGCATTACAGAAC
Product: heavy metal efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MNTKKQKSALLLMGASLAFGPGMPAMVLAESPQQSPASEAAAAAVYHCPMHPEVESHEPGRCPKCKMFLVPGAGISGQSS EPLAEAHKTYICPMHPEVESHEPGRCPKCNMFLVEKEEEEEADPQPEHKSTEDHSAHLAAQNDIFATPAASPIDGGKVKY VCPMHAHIISDEPGTCPICGMDLEKVELGGGQEVLVDVSGGMQQALALRVAKAERQTLWKFVDTVGQIEYDERQIHHVHA RLNGWIETLKVNAVGDKVSKGQLLYEIYSPDLVNAQDDYLLALDTVKKSGDSGRYKELLRKASLRLELLGMNEAQIKELA KTQTTQYRVPFYARQDGVITTLNTREGMYIQPMSEVLALTDISKVWVIADVFENEQSWLKVGQPAEVAVPAMGLSGIKGT IDYIYPELDPVTRSLRVRVVLDNPNQQLRPNTLAKVKLYGGPERDVLTIPQEALIQTGKENRVIVRTADNSFAARQVTVG MYSQGKVEVLSGLSDGEEVVTSGQFLLDSEASLKGSLMRLGSGHQH
Sequences:
>Translated_526_residues MNTKKQKSALLLMGASLAFGPGMPAMVLAESPQQSPASEAAAAAVYHCPMHPEVESHEPGRCPKCKMFLVPGAGISGQSS EPLAEAHKTYICPMHPEVESHEPGRCPKCNMFLVEKEEEEEADPQPEHKSTEDHSAHLAAQNDIFATPAASPIDGGKVKY VCPMHAHIISDEPGTCPICGMDLEKVELGGGQEVLVDVSGGMQQALALRVAKAERQTLWKFVDTVGQIEYDERQIHHVHA RLNGWIETLKVNAVGDKVSKGQLLYEIYSPDLVNAQDDYLLALDTVKKSGDSGRYKELLRKASLRLELLGMNEAQIKELA KTQTTQYRVPFYARQDGVITTLNTREGMYIQPMSEVLALTDISKVWVIADVFENEQSWLKVGQPAEVAVPAMGLSGIKGT IDYIYPELDPVTRSLRVRVVLDNPNQQLRPNTLAKVKLYGGPERDVLTIPQEALIQTGKENRVIVRTADNSFAARQVTVG MYSQGKVEVLSGLSDGEEVVTSGQFLLDSEASLKGSLMRLGSGHQH >Mature_526_residues MNTKKQKSALLLMGASLAFGPGMPAMVLAESPQQSPASEAAAAAVYHCPMHPEVESHEPGRCPKCKMFLVPGAGISGQSS EPLAEAHKTYICPMHPEVESHEPGRCPKCNMFLVEKEEEEEADPQPEHKSTEDHSAHLAAQNDIFATPAASPIDGGKVKY VCPMHAHIISDEPGTCPICGMDLEKVELGGGQEVLVDVSGGMQQALALRVAKAERQTLWKFVDTVGQIEYDERQIHHVHA RLNGWIETLKVNAVGDKVSKGQLLYEIYSPDLVNAQDDYLLALDTVKKSGDSGRYKELLRKASLRLELLGMNEAQIKELA KTQTTQYRVPFYARQDGVITTLNTREGMYIQPMSEVLALTDISKVWVIADVFENEQSWLKVGQPAEVAVPAMGLSGIKGT IDYIYPELDPVTRSLRVRVVLDNPNQQLRPNTLAKVKLYGGPERDVLTIPQEALIQTGKENRVIVRTADNSFAARQVTVG MYSQGKVEVLSGLSDGEEVVTSGQFLLDSEASLKGSLMRLGSGHQH
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=376, Percent_Identity=34.5744680851064, Blast_Score=178, Evalue=7e-46, Organism=Escherichia coli, GI87081796, Length=301, Percent_Identity=29.2358803986711, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57555; Mature: 57555
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKQKSALLLMGASLAFGPGMPAMVLAESPQQSPASEAAAAAVYHCPMHPEVESHEPG CCCCHHCCEEEEEECCEECCCCCCEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCCC RCPKCKMFLVPGAGISGQSSEPLAEAHKTYICPMHPEVESHEPGRCPKCNMFLVEKEEEE CCCCEEEEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC EADPQPEHKSTEDHSAHLAAQNDIFATPAASPIDGGKVKYVCPMHAHIISDEPGTCPICG CCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEC MDLEKVELGGGQEVLVDVSGGMQQALALRVAKAERQTLWKFVDTVGQIEYDERQIHHVHA CCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLNGWIETLKVNAVGDKVSKGQLLYEIYSPDLVNAQDDYLLALDTVKKSGDSGRYKELLR HHHCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHH KASLRLELLGMNEAQIKELAKTQTTQYRVPFYARQDGVITTLNTREGMYIQPMSEVLALT HHCCEEEEECCCHHHHHHHHHHCCCEEECCEEECCCCEEEEEECCCCEEECCHHHHHHHH DISKVWVIADVFENEQSWLKVGQPAEVAVPAMGLSGIKGTIDYIYPELDPVTRSLRVRVV CCCCEEEEEEHHCCCHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEE LDNPNQQLRPNTLAKVKLYGGPERDVLTIPQEALIQTGKENRVIVRTADNSFAARQVTVG EECCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE MYSQGKVEVLSGLSDGEEVVTSGQFLLDSEASLKGSLMRLGSGHQH ECCCCCEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHCCCCCCC >Mature Secondary Structure MNTKKQKSALLLMGASLAFGPGMPAMVLAESPQQSPASEAAAAAVYHCPMHPEVESHEPG CCCCHHCCEEEEEECCEECCCCCCEEEEECCCCCCCHHHHHHEEEEECCCCCCCCCCCCC RCPKCKMFLVPGAGISGQSSEPLAEAHKTYICPMHPEVESHEPGRCPKCNMFLVEKEEEE CCCCEEEEEECCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCC EADPQPEHKSTEDHSAHLAAQNDIFATPAASPIDGGKVKYVCPMHAHIISDEPGTCPICG CCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCEEEEECCCCCCCCEEC MDLEKVELGGGQEVLVDVSGGMQQALALRVAKAERQTLWKFVDTVGQIEYDERQIHHVHA CCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RLNGWIETLKVNAVGDKVSKGQLLYEIYSPDLVNAQDDYLLALDTVKKSGDSGRYKELLR HHHCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCCHHHHHHHH KASLRLELLGMNEAQIKELAKTQTTQYRVPFYARQDGVITTLNTREGMYIQPMSEVLALT HHCCEEEEECCCHHHHHHHHHHCCCEEECCEEECCCCEEEEEECCCCEEECCHHHHHHHH DISKVWVIADVFENEQSWLKVGQPAEVAVPAMGLSGIKGTIDYIYPELDPVTRSLRVRVV CCCCEEEEEEHHCCCHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEE LDNPNQQLRPNTLAKVKLYGGPERDVLTIPQEALIQTGKENRVIVRTADNSFAARQVTVG EECCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCEEEEEECCCCCEEEEEEEE MYSQGKVEVLSGLSDGEEVVTSGQFLLDSEASLKGSLMRLGSGHQH ECCCCCEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]