| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ftsX [H]
Identifier: 119776598
GI number: 119776598
Start: 4096077
End: 4097042
Strand: Reverse
Name: ftsX [H]
Synonym: Sama_3466
Alternate gene names: 119776598
Gene position: 4097042-4096077 (Counterclockwise)
Preceding gene: 119776599
Following gene: 119776597
Centisome position: 95.14
GC content: 55.9
Gene sequence:
>966_bases ATGCGCGAACATGGCGAACTGACCCGCAGCAAGCTGCCCATCAGTGGGCAAATCGTGATGTTTTTCATCCGCCACATCCA GCAGGGTATGGCCAGTATCGGTGAGCTGTGGCGTAATCCGGTATCGTCACTGATGACCATGGCGGTGCTGGGGGTGAGTC TGAGTCTGCCTGCCGCGCTGCAGGTACTGGTTAAAAACGCCGACACCATCACTCAGTCCTGGAACAACGCCGCTGAGATC TCGCTGTTTATTGAAGAAGGCAAGAACGAGCAGGCAATTCAAAGTCTGATCTCCCGCATCAAGGTGTACCCGGAGGTAGC TGAGGTGCACTACATTAATCGGGACGAAGCACTGGCTGAGTTTCAGCGTCTCTCAGGCTTTGGCGAGGCCCTGTCGTATC TCGAGTCCAATCCACTGCCTGCAGTGGTGACTGTGCTGCCCACCGAGAAATTCTCAAGCCCTATAGGCGCCCGCGAGCTG TTGACCAAGCTTGAGCGCGAGCAGGGCGTCAGCTTTGGCCGCCTCGACATCGAATGGCTGGAACGACTGCAGGCCGTGGT GCGCTTACTGGAACGCACTGTGCTTGCCATTGCCGCGCTCCTGGTGGTGGCCGTGGTACTTATCATAGGCAATACCATTC GACTGGCGATTATGAATCGGCGCAACGAAATCGAGGTGATGAAGCTGGTTGGGGCTACCGAAGCCTTTATTCAACGGCCG TTTTTGTACACCGGCATCTGGTATGGGGTGATCGGCGGCATGCTGGCCTGGATCATTATCAACCTGCTGGTGTGGTATCT CGATGGCGCCATTGCCGAGCTGCTCGGGCTCTACGGCAGCGATATCGAAATGGCTTCCTTAAGCTTTACCGAATTGGTTC AGCTGGTGTTTTTGGCCTCGTTCCTCGGCTGGCTTGGCTCATATTTATCCGTGCGTCAGCATCTTAGGGCGATAGAACCG TCCTGA
Upstream 100 bases:
>100_bases AGCCCGGATGAAATACCGCACCCTGACTCTGCGTCAGGGCCGCATGTTGGGGGCGCGCGAAATCGGCGAGCCTCTGCGTC CGGGTGTATAAGGAGCCAAG
Downstream 100 bases:
>100_bases TAGTGCGGGTGCATTGGCTGATAAATGAACGAATGTTCACTTGTGATGTCCAACCTGCAGAGCCAAAATAGCGACCTGTG TCCAGCACGCGGATCCGGTA
Product: cell division ABC transporter permease FtsX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MREHGELTRSKLPISGQIVMFFIRHIQQGMASIGELWRNPVSSLMTMAVLGVSLSLPAALQVLVKNADTITQSWNNAAEI SLFIEEGKNEQAIQSLISRIKVYPEVAEVHYINRDEALAEFQRLSGFGEALSYLESNPLPAVVTVLPTEKFSSPIGAREL LTKLEREQGVSFGRLDIEWLERLQAVVRLLERTVLAIAALLVVAVVLIIGNTIRLAIMNRRNEIEVMKLVGATEAFIQRP FLYTGIWYGVIGGMLAWIIINLLVWYLDGAIAELLGLYGSDIEMASLSFTELVQLVFLASFLGWLGSYLSVRQHLRAIEP S
Sequences:
>Translated_321_residues MREHGELTRSKLPISGQIVMFFIRHIQQGMASIGELWRNPVSSLMTMAVLGVSLSLPAALQVLVKNADTITQSWNNAAEI SLFIEEGKNEQAIQSLISRIKVYPEVAEVHYINRDEALAEFQRLSGFGEALSYLESNPLPAVVTVLPTEKFSSPIGAREL LTKLEREQGVSFGRLDIEWLERLQAVVRLLERTVLAIAALLVVAVVLIIGNTIRLAIMNRRNEIEVMKLVGATEAFIQRP FLYTGIWYGVIGGMLAWIIINLLVWYLDGAIAELLGLYGSDIEMASLSFTELVQLVFLASFLGWLGSYLSVRQHLRAIEP S >Mature_321_residues MREHGELTRSKLPISGQIVMFFIRHIQQGMASIGELWRNPVSSLMTMAVLGVSLSLPAALQVLVKNADTITQSWNNAAEI SLFIEEGKNEQAIQSLISRIKVYPEVAEVHYINRDEALAEFQRLSGFGEALSYLESNPLPAVVTVLPTEKFSSPIGAREL LTKLEREQGVSFGRLDIEWLERLQAVVRLLERTVLAIAALLVVAVVLIIGNTIRLAIMNRRNEIEVMKLVGATEAFIQRP FLYTGIWYGVIGGMLAWIIINLLVWYLDGAIAELLGLYGSDIEMASLSFTELVQLVFLASFLGWLGSYLSVRQHLRAIEP S
Specific function: Not known. Is coded in an operon essential for cell division [H]
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=290, Percent_Identity=34.8275862068965, Blast_Score=194, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004513 - InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 35766; Mature: 35766
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREHGELTRSKLPISGQIVMFFIRHIQQGMASIGELWRNPVSSLMTMAVLGVSLSLPAAL CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH QVLVKNADTITQSWNNAAEISLFIEEGKNEQAIQSLISRIKVYPEVAEVHYINRDEALAE HHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHH FQRLSGFGEALSYLESNPLPAVVTVLPTEKFSSPIGARELLTKLEREQGVSFGRLDIEWL HHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH ERLQAVVRLLERTVLAIAALLVVAVVLIIGNTIRLAIMNRRNEIEVMKLVGATEAFIQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHCC FLYTGIWYGVIGGMLAWIIINLLVWYLDGAIAELLGLYGSDIEMASLSFTELVQLVFLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH FLGWLGSYLSVRQHLRAIEPS HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MREHGELTRSKLPISGQIVMFFIRHIQQGMASIGELWRNPVSSLMTMAVLGVSLSLPAAL CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH QVLVKNADTITQSWNNAAEISLFIEEGKNEQAIQSLISRIKVYPEVAEVHYINRDEALAE HHHHHHHHHHHHCCCCHHHEEEEEECCCCHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHH FQRLSGFGEALSYLESNPLPAVVTVLPTEKFSSPIGARELLTKLEREQGVSFGRLDIEWL HHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH ERLQAVVRLLERTVLAIAALLVVAVVLIIGNTIRLAIMNRRNEIEVMKLVGATEAFIQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHCC FLYTGIWYGVIGGMLAWIIINLLVWYLDGAIAELLGLYGSDIEMASLSFTELVQLVFLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHH FLGWLGSYLSVRQHLRAIEPS HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]