The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is 119776537

Identifier: 119776537

GI number: 119776537

Start: 4031294

End: 4031515

Strand: Direct

Name: 119776537

Synonym: Sama_3405

Alternate gene names: NA

Gene position: 4031294-4031515 (Clockwise)

Preceding gene: 119776529

Following gene: 119776538

Centisome position: 93.62

GC content: 55.86

Gene sequence:

>222_bases
ATGTCACAACAAGGATCGGCGGGCAACGTCCTCGCCGCAGGGGTTAACCTCTTTTTTCCCGGCCTTGGCCAATTGCTTCA
GGGGCGTATTATGGCGGCCCTGCTGTTCTTTGTTATCACCGTTGGCGGCTATGCGCTCTGGTGGTTGATAGTGCCGGCCA
TCATAGGGGGTATTGCCCATCTGTGGTCCATCATTGATGCCGCCCGCTTTAAAGCAGACTGA

Upstream 100 bases:

>100_bases
TTTTTCACTGGTTTTCTCTTGCCGCTTATCACAGGTACGGTTTATGTTCGTACAATAAAACGTACAATACCTGCTTTACA
AGTGTTAAAGGAGCGATTCA

Downstream 100 bases:

>100_bases
TGACAGGAAGCCAAACCATGAAACAACTTCTCTCGCTGGCGCTGCTTGGCAGTGCTTTATTACTCGGTGGTTGCCAGAGT
GCTTACTATGGCGCCATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSQQGSAGNVLAAGVNLFFPGLGQLLQGRIMAALLFFVITVGGYALWWLIVPAIIGGIAHLWSIIDAARFKAD

Sequences:

>Translated_73_residues
MSQQGSAGNVLAAGVNLFFPGLGQLLQGRIMAALLFFVITVGGYALWWLIVPAIIGGIAHLWSIIDAARFKAD
>Mature_72_residues
SQQGSAGNVLAAGVNLFFPGLGQLLQGRIMAALLFFVITVGGYALWWLIVPAIIGGIAHLWSIIDAARFKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7728; Mature: 7597

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQGSAGNVLAAGVNLFFPGLGQLLQGRIMAALLFFVITVGGYALWWLIVPAIIGGIAH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWSIIDAARFKAD
HHHHHHHHHHCCC
>Mature Secondary Structure 
SQQGSAGNVLAAGVNLFFPGLGQLLQGRIMAALLFFVITVGGYALWWLIVPAIIGGIAH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWSIIDAARFKAD
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA