| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is azoR
Identifier: 119776530
GI number: 119776530
Start: 4025623
End: 4026213
Strand: Reverse
Name: azoR
Synonym: Sama_3398
Alternate gene names: 119776530
Gene position: 4026213-4025623 (Counterclockwise)
Preceding gene: 119776531
Following gene: 119776528
Centisome position: 93.5
GC content: 56.68
Gene sequence:
>591_bases ATGTCAAAGGTATTAGTGCTCAAGTCCAGCATTCTTGGTGATTTTTCCCAGTCTGGCCGCTTGATTGATGAATGGGTTGC TGCGCGCCGCGCGAGTGGCGATACAGTGACAGTGCGCGATTTGGCTGCCGAGCCATTGCCGGTGCTTGACGGTGAAATTG CGTCGGGTCTGCGTGGTGGCGAGAGTTTAAGTCCCCGTCAGCAAGAAGCATTGGCACTGTCCGATGCCTTGATTGCCGAG CTCAAAGTGCACGATCAACTGGTGGTAGCGGCCCCCATGTACAACTTCAGTATCCCCACTCAGCTGAAAAACTGGATAGA TCTGGTGGCCCGTGCCGGCGTGACCTTTACCTACACAGCCGAAGGTCCACAGGGACTTATCCAGGGCAAGCAGGCCATGC TGATCACGACCCGCGGCGGAGTACACAAGGGCTCAGGCAGTGACCATGTGGTGCCTTATCTGAAAACCGTACTCGGATTT ATCGGTATCACTGATGTGGATACCGTGTACGCCGAAGCCCTGAGCATGGGGCCGGAAGCGGCAGAGCGTGGCATCAAGGA TGCCCGTGACCAGCTGGCGCTGGTGGGTTAA
Upstream 100 bases:
>100_bases GAATATCTGATTTAATCTGCTTTTTTTCAATTTTGTGGGCTAATACACTGCAACCATCAAGTTACCCCAGTGGGGATATT CACAGTTTCTTGGAGGTCTT
Downstream 100 bases:
>100_bases TCCCGACTTTCCTTCTCATCATCCTGTTTTTGCCCCTCCTGTTTGAGGGGCATTTTTTTATCGCCGTCGGCCAGCATGGG GCGGCACATGGCACAACCCT
Product: (Acyl-carrier-protein) phosphodiesterase
Products: 4'-phosphopantetheine; apoprotein
Alternate protein names: Azo-dye reductase; FMN-dependent NADH-azo compound oxidoreductase
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAE LKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGF IGITDVDTVYAEALSMGPEAAERGIKDARDQLALVG
Sequences:
>Translated_196_residues MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAE LKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGF IGITDVDTVYAEALSMGPEAAERGIKDARDQLALVG >Mature_195_residues SKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAEL KVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFI GITDVDTVYAEALSMGPEAAERGIKDARDQLALVG
Specific function: Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
COG id: COG1182
COG function: function code I; Acyl carrier protein phosphodiesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the azoreductase type 1 family
Homologues:
Organism=Escherichia coli, GI1787680, Length=192, Percent_Identity=63.0208333333333, Blast_Score=240, Evalue=4e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AZOR_SHEAM (A1SB44)
Other databases:
- EMBL: CP000507 - RefSeq: YP_929270.1 - ProteinModelPortal: A1SB44 - SMR: A1SB44 - STRING: A1SB44 - GeneID: 4605645 - GenomeReviews: CP000507_GR - KEGG: saz:Sama_3398 - NMPDR: fig|326297.7.peg.3200 - eggNOG: COG1182 - HOGENOM: HBG565834 - OMA: GLVENTR - PhylomeDB: A1SB44 - HAMAP: MF_01216 - InterPro: IPR003680 - InterPro: IPR023048
Pfam domain/function: PF02525 Flavodoxin_2
EC number: 3.1.4.14
Molecular weight: Translated: 20769; Mature: 20638
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGG CCCEEEEHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHCCCCC ESLSPRQQEALALSDALIAELKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC EGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFIGITDVDTVYAEALSMGPEA CCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH AERGIKDARDQLALVG HHHHHHHHHHHHCCCC >Mature Secondary Structure SKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGG CCEEEEHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHCCCCC ESLSPRQQEALALSDALIAELKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTA CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC EGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFIGITDVDTVYAEALSMGPEA CCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH AERGIKDARDQLALVG HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: [acyl-carrier protein]; H2O
Specific reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein
General reaction: Phosphoric ester hydrolysis [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA