Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is azoR

Identifier: 119776530

GI number: 119776530

Start: 4025623

End: 4026213

Strand: Reverse

Name: azoR

Synonym: Sama_3398

Alternate gene names: 119776530

Gene position: 4026213-4025623 (Counterclockwise)

Preceding gene: 119776531

Following gene: 119776528

Centisome position: 93.5

GC content: 56.68

Gene sequence:

>591_bases
ATGTCAAAGGTATTAGTGCTCAAGTCCAGCATTCTTGGTGATTTTTCCCAGTCTGGCCGCTTGATTGATGAATGGGTTGC
TGCGCGCCGCGCGAGTGGCGATACAGTGACAGTGCGCGATTTGGCTGCCGAGCCATTGCCGGTGCTTGACGGTGAAATTG
CGTCGGGTCTGCGTGGTGGCGAGAGTTTAAGTCCCCGTCAGCAAGAAGCATTGGCACTGTCCGATGCCTTGATTGCCGAG
CTCAAAGTGCACGATCAACTGGTGGTAGCGGCCCCCATGTACAACTTCAGTATCCCCACTCAGCTGAAAAACTGGATAGA
TCTGGTGGCCCGTGCCGGCGTGACCTTTACCTACACAGCCGAAGGTCCACAGGGACTTATCCAGGGCAAGCAGGCCATGC
TGATCACGACCCGCGGCGGAGTACACAAGGGCTCAGGCAGTGACCATGTGGTGCCTTATCTGAAAACCGTACTCGGATTT
ATCGGTATCACTGATGTGGATACCGTGTACGCCGAAGCCCTGAGCATGGGGCCGGAAGCGGCAGAGCGTGGCATCAAGGA
TGCCCGTGACCAGCTGGCGCTGGTGGGTTAA

Upstream 100 bases:

>100_bases
GAATATCTGATTTAATCTGCTTTTTTTCAATTTTGTGGGCTAATACACTGCAACCATCAAGTTACCCCAGTGGGGATATT
CACAGTTTCTTGGAGGTCTT

Downstream 100 bases:

>100_bases
TCCCGACTTTCCTTCTCATCATCCTGTTTTTGCCCCTCCTGTTTGAGGGGCATTTTTTTATCGCCGTCGGCCAGCATGGG
GCGGCACATGGCACAACCCT

Product: (Acyl-carrier-protein) phosphodiesterase

Products: 4'-phosphopantetheine; apoprotein

Alternate protein names: Azo-dye reductase; FMN-dependent NADH-azo compound oxidoreductase

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAE
LKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGF
IGITDVDTVYAEALSMGPEAAERGIKDARDQLALVG

Sequences:

>Translated_196_residues
MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAE
LKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGF
IGITDVDTVYAEALSMGPEAAERGIKDARDQLALVG
>Mature_195_residues
SKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGGESLSPRQQEALALSDALIAEL
KVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTAEGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFI
GITDVDTVYAEALSMGPEAAERGIKDARDQLALVG

Specific function: Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity

COG id: COG1182

COG function: function code I; Acyl carrier protein phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the azoreductase type 1 family

Homologues:

Organism=Escherichia coli, GI1787680, Length=192, Percent_Identity=63.0208333333333, Blast_Score=240, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AZOR_SHEAM (A1SB44)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_929270.1
- ProteinModelPortal:   A1SB44
- SMR:   A1SB44
- STRING:   A1SB44
- GeneID:   4605645
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_3398
- NMPDR:   fig|326297.7.peg.3200
- eggNOG:   COG1182
- HOGENOM:   HBG565834
- OMA:   GLVENTR
- PhylomeDB:   A1SB44
- HAMAP:   MF_01216
- InterPro:   IPR003680
- InterPro:   IPR023048

Pfam domain/function: PF02525 Flavodoxin_2

EC number: 3.1.4.14

Molecular weight: Translated: 20769; Mature: 20638

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGG
CCCEEEEHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHCCCCC
ESLSPRQQEALALSDALIAELKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTA
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC
EGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFIGITDVDTVYAEALSMGPEA
CCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH
AERGIKDARDQLALVG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKVLVLKSSILGDFSQSGRLIDEWVAARRASGDTVTVRDLAAEPLPVLDGEIASGLRGG
CCEEEEHHHHHHCHHHCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCHHHHCCCCC
ESLSPRQQEALALSDALIAELKVHDQLVVAAPMYNFSIPTQLKNWIDLVARAGVTFTYTA
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEC
EGPQGLIQGKQAMLITTRGGVHKGSGSDHVVPYLKTVLGFIGITDVDTVYAEALSMGPEA
CCCHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHH
AERGIKDARDQLALVG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: [acyl-carrier protein]; H2O

Specific reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein

General reaction: Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA