The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

Click here to switch to the map view.

The map label for this gene is pspE [C]

Identifier: 119776529

GI number: 119776529

Start: 4025099

End: 4025416

Strand: Direct

Name: pspE [C]

Synonym: Sama_3397

Alternate gene names: 119776529

Gene position: 4025099-4025416 (Clockwise)

Preceding gene: 119776527

Following gene: 119776537

Centisome position: 93.47

GC content: 60.06

Gene sequence:

>318_bases
ATGCTGCACTCTATGCTCGCCAGATTATCCGGCAGCGCTCAGCCCGCCGAATGCTGGCAACTGGTGAAACATGGCGCCAC
CCTGGTGGATGTCAGAAGTCCGGCGGAATTTGCCCAGGGCCATCTGCCCCAGGCACTCAACATCCCCCTGGATACGCTGG
AACACTGGCAATCGGCTCAGGCCGATAAGGCCGTGCCGCTGGTGCTCTATTGCGGCGCCGGTATTCGCGCCCAAAAAGGA
TGCGACATCCTCAGAGCCAAGGGGTTCAGCTCTGTGATCAATGGCGGCGCCATCAAGGATTTACTGGCGGGCGCTTAA

Upstream 100 bases:

>100_bases
CCTGTTCAATGCCAAAAAAGAGCGCTCTGTCACGATAATTGCATTTCTCAATTCATCAGATTACTCTTTATGAACTTTTT
CTAATTGAAATGAGGTTAGC

Downstream 100 bases:

>100_bases
GCCATGACAACACAGACGCCCAAAACTCCAATTCCCGGGTTTGCCTTCAGCACGGGGCGCAACGCCTCAAGAAAGGTACG
TTACGTGGAGTACAGTCAGA

Product: phage shock protein E

Products: NA

Alternate protein names: Phage Shock Protein E; Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Domain Protein; Rhodanese-Like Protein

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLHSMLARLSGSAQPAECWQLVKHGATLVDVRSPAEFAQGHLPQALNIPLDTLEHWQSAQADKAVPLVLYCGAGIRAQKG
CDILRAKGFSSVINGGAIKDLLAGA

Sequences:

>Translated_105_residues
MLHSMLARLSGSAQPAECWQLVKHGATLVDVRSPAEFAQGHLPQALNIPLDTLEHWQSAQADKAVPLVLYCGAGIRAQKG
CDILRAKGFSSVINGGAIKDLLAGA
>Mature_105_residues
MLHSMLARLSGSAQPAECWQLVKHGATLVDVRSPAEFAQGHLPQALNIPLDTLEHWQSAQADKAVPLVLYCGAGIRAQKG
CDILRAKGFSSVINGGAIKDLLAGA

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11072; Mature: 11072

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSMLARLSGSAQPAECWQLVKHGATLVDVRSPAEFAQGHLPQALNIPLDTLEHWQSAQ
CHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHCC
ADKAVPLVLYCGAGIRAQKGCDILRAKGFSSVINGGAIKDLLAGA
CCCCCCEEEECCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MLHSMLARLSGSAQPAECWQLVKHGATLVDVRSPAEFAQGHLPQALNIPLDTLEHWQSAQ
CHHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCCCCHHHHHHHHHCC
ADKAVPLVLYCGAGIRAQKGCDILRAKGFSSVINGGAIKDLLAGA
CCCCCCEEEECCCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA