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The map label for this gene is ygiQ [C]

Identifier: 119776481

GI number: 119776481

Start: 3974616

End: 3977036

Strand: Reverse

Name: ygiQ [C]

Synonym: Sama_3349

Alternate gene names: 119776481

Gene position: 3977036-3974616 (Counterclockwise)

Preceding gene: 119776482

Following gene: 119776479

Centisome position: 92.36

GC content: 57.0

Gene sequence:

>2421_bases
ATGCGTGTTGAAGCCACCCTTTTCAGTTATCCCAGATTCTGGGCCGAGTGCTACGGCACTGCCCCCTTCCTGCCCATGTC
CCGGGCCGAGATGGACCAGCTTGGCTGGGACAGCTGTGACATCATCATAGTCACGGGCGATGCCTATGTGGACCATCCCA
GCTTTGGGATGGCAGTGATTGGCAGGATGCTGGAGGCGCAGGGATTCCGCGTGGGCATTATTTCCCAGCCCGATTGGTCT
AGCAAAGACGATTTTATGAAGCTGGGTAAGCCCAACCTCTTTTATGGGGTAACGGCAGGCAACATGGACTCGATGATCAA
CCGCTATACTGCCGACCGTAAACTGCGCCACGACGATGCCTATACCCCTGGCAACGTGGGTGGCAAGCGCCCCGACCGCG
CAGTGACCGTATACACTCAACGCTGCAAAGAAGCCTTTAAAGACGTCCCTGTGGTGATTGGCGGTATTGAGGCCAGCCTG
CGCCGTATCGCACATTACGACTATTGGTCTGATAAGGTGCGTCGCAGCGTGATATTCGACGCCAAGGCCGACATCCTGGT
GTACGGCAATGCCGAGCGACCACTTGCCGAGATTGCTCACCGCCTCGCCGGCGGTGAAGCGGCATCCCAGCTGACCGACA
TTCGTGGCACTGCCATTATCAGCAAGACACCCATGCCCGGATGGCGTGGCATGGACTCGCGCAAAATAGATCAGCTGCAT
AAAATCGACCCCATACCCAACCCCTATGGTGCCGACGATGTGGGCTGTCAGAATTTATCCGGCCCCACCGATGCCAAGGT
GTTTAACGATGAAACGGCACCGGATGGTGTCAACGTTGCCAAGCCCATCAGCATTCAGCCGCCCAAACCGCGTCCCTGGG
AGCAGACCTATGTGCTTCTGCCCGCCTTCGAGCGGGTGAGCGAAGACAGATACCTGTACGCCCATGCCTCGCGTATTCTG
CATCAGGAGCAAAACCCGGGTTGTGCCCGTGCCCTGTTCCAGCCACACGGCGATCGCGGTATTTGGGTGAATCCTCCGGC
ATGGCCCCTGTCTACCGAAGAGATGGATGCGGTGTTCGACCTGCCTTACCAGCGGGTGCCACACCCCGTGTATGGCAAGG
AAAAAATCCCTGCCTACGACATGATTAAGACTTCCATCAATATCATGAGGGGTTGCTTTGGTGGCTGTTCATTCTGCTCT
ATTACTGAGCACGAAGGCCGTATTATCCAGAGCCGTTCGAAGGAATCTATCGTAAAAGAAATCAAGGATATCCAGGCAAA
GGTGCCGGGGTTTACCGGGGTCATTTCCGATCTGGGTGGCCCCACAGCCAACATGTACCGTTTGGGCTGCAAGAGCGAGA
AGGCTGAAAAGACCTGCCGCCGCCTGTCCTGTGTATTCCCCAGTATCTGTGGCCATTTGGATACCGACCATCAGCACACC
ATTGACCTATACCGCGCCGCCCGTGACGTGCCCGGTATCAAAAAGGTGCTGATTGCCTCCGGCGTGCGTTATGACCTTGC
CATCGAAGACCCCCGTTATGTGAAGGAACTGGCCAAACACCACGTGGGCGGCTACCTCAAAATCGCGCCGGAACATACCG
AAGAAGGCCCGCTGTCGAAGATGATGAAACCCGGCATGGGCACCTACGACAAGTTCAAGGAGCTGTTCGACAAGTACTCG
AAAGAGGCGGGTAAGGAGCAGTATCTGATCCCTTACTTTATCTCGGCTCACCCGGGTACCACGGATGAAGACATGGTCAA
TCTGGCGCTGTGGCTCAAGGAGCGCAAGTTCAAGCTGGATCAGGTGCAGAACTTCTATCCGTCGCCCATGGCCAATGCCA
CTACCATCTATCACACAGAGCTGAACTCGCTGAAAAACGTCAAGCACAGCAGTGAAGAAGTGCCGGTACCGAAAAAGGGG
CGTCAGCGCCGCCTGCACAAGGCACTGCTGCGTTACCACGACAGCGCTGGCTGGCCGCTTATCCGCGAAGCCCTGATTGC
CATGGGTAAGGAACACCTGATTGGTACTGGAACCCAGCATCTGGTGCCGCCGGAAGGCCGCGCCGAGCAGTGGGCCGGTA
AGGGCAACAGTGGTAAGGGTGGTAAGCCAAAGGCCGAGAAAGGCCAGCAGGCTTTTACCCGTTTCAGCGGTAATCAGTTT
GACGACCGCAAGGGCGGCGAGAAAGGAAAGCCTCAGGGCAAGACTCAAGCCAAGGGTAAGACGCAGGGCGCTGCCAACGC
CAATGGCAGTACTCCGGGGAAAACACAGGGCAAGTCTCAGGGTAAAGGCGGCAACAATGCCCGCCCCGGTGCCAAGCCAG
TCTTTGGTAAACCTAATGCTGGTAAATCCAGTGCTGGTAAGTCCGGTGGCGGCAAGCCCAGTGGTGGCAGTTCGGCGCCC
AAGGCGCGAAAGCCAGCATAA

Upstream 100 bases:

>100_bases
TTTAGTCACACTTAAGGGCGGAGTCCTGTTATACTCCGCGCCCTTGAAACGGCGTCATCCGGGGATGATGCCAGAGTGAT
TGAGTCGTCAGGTCAGTGTG

Downstream 100 bases:

>100_bases
TGCCCAATACAAACGCCGCGATTCAGCGGCGTTTTTTATCCCATACTTTCCCTGTGCTACACCAGACCCATGCCCTTGCT
CACAAGGGCGCTGAGATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVIGRMLEAQGFRVGIISQPDWS
SKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDAYTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASL
RRIAHYDYWSDKVRRSVIFDAKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH
KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLLPAFERVSEDRYLYAHASRIL
HQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFDLPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCS
ITEHEGRIIQSRSKESIVKEIKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT
IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSKMMKPGMGTYDKFKELFDKYS
KEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLDQVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKG
RQRRLHKALLRYHDSAGWPLIREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF
DDRKGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKPNAGKSSAGKSGGGKPSGGSSAP
KARKPA

Sequences:

>Translated_806_residues
MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVIGRMLEAQGFRVGIISQPDWS
SKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDAYTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASL
RRIAHYDYWSDKVRRSVIFDAKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH
KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLLPAFERVSEDRYLYAHASRIL
HQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFDLPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCS
ITEHEGRIIQSRSKESIVKEIKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT
IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSKMMKPGMGTYDKFKELFDKYS
KEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLDQVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKG
RQRRLHKALLRYHDSAGWPLIREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF
DDRKGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKPNAGKSSAGKSGGGKPSGGSSAP
KARKPA
>Mature_806_residues
MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVIGRMLEAQGFRVGIISQPDWS
SKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDAYTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASL
RRIAHYDYWSDKVRRSVIFDAKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH
KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLLPAFERVSEDRYLYAHASRIL
HQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFDLPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCS
ITEHEGRIIQSRSKESIVKEIKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT
IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSKMMKPGMGTYDKFKELFDKYS
KEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLDQVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKG
RQRRLHKALLRYHDSAGWPLIREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF
DDRKGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKPNAGKSSAGKSGGGKPSGGSSAP
KARKPA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=677, Percent_Identity=74.0029542097489, Blast_Score=1080, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 88809; Mature: 88809

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVI
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHHH
GRMLEAQGFRVGIISQPDWSSKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDA
HHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
YTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASLRRIAHYDYWSDKVRRSVIFD
CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHEEE
AKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH
CCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHH
KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLL
HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PAFERVSEDRYLYAHASRILHQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFD
ECHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHC
LPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSKESIVKE
CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCHHHHHHH
IKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT
HHHHHHHCCCHHHHHHHCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSK
HHHHHHHHCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
MMKPGMGTYDKFKELFDKYSKEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLD
HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
QVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKGRQRRLHKALLRYHDSAGWPL
HHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
IREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF
HHHHHHHCCHHHEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DDRKGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKPNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKSSAGKSGGGKPSGGSSAPKARKPA
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVEATLFSYPRFWAECYGTAPFLPMSRAEMDQLGWDSCDIIIVTGDAYVDHPSFGMAVI
CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEECCCCHHHHHH
GRMLEAQGFRVGIISQPDWSSKDDFMKLGKPNLFYGVTAGNMDSMINRYTADRKLRHDDA
HHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
YTPGNVGGKRPDRAVTVYTQRCKEAFKDVPVVIGGIEASLRRIAHYDYWSDKVRRSVIFD
CCCCCCCCCCCCCEEHHHHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHHEEE
AKADILVYGNAERPLAEIAHRLAGGEAASQLTDIRGTAIISKTPMPGWRGMDSRKIDQLH
CCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHH
KIDPIPNPYGADDVGCQNLSGPTDAKVFNDETAPDGVNVAKPISIQPPKPRPWEQTYVLL
HCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PAFERVSEDRYLYAHASRILHQEQNPGCARALFQPHGDRGIWVNPPAWPLSTEEMDAVFD
ECHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHC
LPYQRVPHPVYGKEKIPAYDMIKTSINIMRGCFGGCSFCSITEHEGRIIQSRSKESIVKE
CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHCCHHHHHHH
IKDIQAKVPGFTGVISDLGGPTANMYRLGCKSEKAEKTCRRLSCVFPSICGHLDTDHQHT
HHHHHHHCCCHHHHHHHCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
IDLYRAARDVPGIKKVLIASGVRYDLAIEDPRYVKELAKHHVGGYLKIAPEHTEEGPLSK
HHHHHHHHCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
MMKPGMGTYDKFKELFDKYSKEAGKEQYLIPYFISAHPGTTDEDMVNLALWLKERKFKLD
HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
QVQNFYPSPMANATTIYHTELNSLKNVKHSSEEVPVPKKGRQRRLHKALLRYHDSAGWPL
HHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
IREALIAMGKEHLIGTGTQHLVPPEGRAEQWAGKGNSGKGGKPKAEKGQQAFTRFSGNQF
HHHHHHHCCHHHEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
DDRKGGEKGKPQGKTQAKGKTQGAANANGSTPGKTQGKSQGKGGNNARPGAKPVFGKPNA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKSSAGKSGGGKPSGGSSAPKARKPA
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]