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The map label for this gene is rdoA [H]

Identifier: 119776454

GI number: 119776454

Start: 3950729

End: 3951706

Strand: Reverse

Name: rdoA [H]

Synonym: Sama_3322

Alternate gene names: 119776454

Gene position: 3951706-3950729 (Counterclockwise)

Preceding gene: 119776455

Following gene: 119776453

Centisome position: 91.77

GC content: 57.67

Gene sequence:

>978_bases
ATGAGCGCGGCCTTTCATTTTCACACCCTGACGCCGGACACCATACTCGATGCCATCGAGTCCGTGGGGGTTTACCCGGA
AACCGGCCTGACGCCACTGAACAGTTTCGAAAACCGTGTTTATCAGTTTCGCTGCGATCGCGCCAATCGTTATGTGGCCA
AGTTTTACCGACCACAGCGCTGGACTGATAAGCAAATACTGGAAGAGCACGCCTTTGCCTTTGAGTTGGCTGAGGCCGAA
GTACCCCTGGCGGCGCCCGTGGTGATAGAAGGCCAGAGCCTGTTTCACTTTGAGGACTTTAGGTTTGCGCTTTTCCCGTC
CATCGGTGGGCGCCAGTTCGAGATGGATAATCTTGACCAACTGGATGCCGTTGGCCACTTTATCGGTCGTCTGCATCAGG
TGGGTAAAGCCGGGCATTTCAGCGAGCGCGAAACCCTGTCTTCGGCCATGGCCAGGGATGCCTTGCAGGTACTGCTGGCC
TCTCCCCACGTGCCGCACTCCCTGATGGCAGACTTTGCCGCTGCAGGGCAGGCGCTGGTGAGTGCCATTGAGTCGGCCTG
GATAAAGACAGACATCCTGCGTCTCCATGGCGATCTGCATCCGGGCAATATTCTATGGACCCCTGATGGTCCGGGGTTTG
TTGATCTGGACGATGCCCGCAGTGGCCCGGCGGTACAGGACCTGTGGATGATGCTTGCAGGCGATGACAACGAGCGCCGC
ATGCAGCTCGATACCCTGCTGGGGGCCTATGAGGAATTTTGTGAATTCGACACCAGAGAGTTGGCGCTGATAGAACCCCT
GCGGGGATTGCGTATGCTCAGCCACATGGCGTGGATCAGTCGCCGCTGGGATGACCCGGCCTTTCCCATGTACTTTCCGT
GGTTTGCCGAGGATGCTTATTGGCAGCGGCAAATTCGCGACATGCAGGCGCAGGTGGCGCAAATTGCCGAGCCACCCCTG
AGTTTGCAGCCTTTTTGA

Upstream 100 bases:

>100_bases
ACGGCGATGTAGCCTGGCTTGCCAGCGACAGAGAAGAGGACCTTGAGGTGCTGGAATTTCTCGCCAGCCTGCTGAAGCCC
CTGATTAGGGAGGAGCAGCC

Downstream 100 bases:

>100_bases
CGTGTTTTGTAACACAAAGTTGAACTAGGGGCTTGAGATGGCATCAAAAAGCGTATTAGTTTAGGCATCGCCCAATGAGA
TTTGGTCCACCGGACCCGCT

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSAAFHFHTLTPDTILDAIESVGVYPETGLTPLNSFENRVYQFRCDRANRYVAKFYRPQRWTDKQILEEHAFAFELAEAE
VPLAAPVVIEGQSLFHFEDFRFALFPSIGGRQFEMDNLDQLDAVGHFIGRLHQVGKAGHFSERETLSSAMARDALQVLLA
SPHVPHSLMADFAAAGQALVSAIESAWIKTDILRLHGDLHPGNILWTPDGPGFVDLDDARSGPAVQDLWMMLAGDDNERR
MQLDTLLGAYEEFCEFDTRELALIEPLRGLRMLSHMAWISRRWDDPAFPMYFPWFAEDAYWQRQIRDMQAQVAQIAEPPL
SLQPF

Sequences:

>Translated_325_residues
MSAAFHFHTLTPDTILDAIESVGVYPETGLTPLNSFENRVYQFRCDRANRYVAKFYRPQRWTDKQILEEHAFAFELAEAE
VPLAAPVVIEGQSLFHFEDFRFALFPSIGGRQFEMDNLDQLDAVGHFIGRLHQVGKAGHFSERETLSSAMARDALQVLLA
SPHVPHSLMADFAAAGQALVSAIESAWIKTDILRLHGDLHPGNILWTPDGPGFVDLDDARSGPAVQDLWMMLAGDDNERR
MQLDTLLGAYEEFCEFDTRELALIEPLRGLRMLSHMAWISRRWDDPAFPMYFPWFAEDAYWQRQIRDMQAQVAQIAEPPL
SLQPF
>Mature_324_residues
SAAFHFHTLTPDTILDAIESVGVYPETGLTPLNSFENRVYQFRCDRANRYVAKFYRPQRWTDKQILEEHAFAFELAEAEV
PLAAPVVIEGQSLFHFEDFRFALFPSIGGRQFEMDNLDQLDAVGHFIGRLHQVGKAGHFSERETLSSAMARDALQVLLAS
PHVPHSLMADFAAAGQALVSAIESAWIKTDILRLHGDLHPGNILWTPDGPGFVDLDDARSGPAVQDLWMMLAGDDNERRM
QLDTLLGAYEEFCEFDTRELALIEPLRGLRMLSHMAWISRRWDDPAFPMYFPWFAEDAYWQRQIRDMQAQVAQIAEPPLS
LQPF

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=325, Percent_Identity=52.9230769230769, Blast_Score=353, Evalue=7e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 36996; Mature: 36865

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAFHFHTLTPDTILDAIESVGVYPETGLTPLNSFENRVYQFRCDRANRYVAKFYRPQR
CCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCCC
WTDKQILEEHAFAFELAEAEVPLAAPVVIEGQSLFHFEDFRFALFPSIGGRQFEMDNLDQ
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCEEECCCCCCCEECCCCHHH
LDAVGHFIGRLHQVGKAGHFSERETLSSAMARDALQVLLASPHVPHSLMADFAAAGQALV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SAIESAWIKTDILRLHGDLHPGNILWTPDGPGFVDLDDARSGPAVQDLWMMLAGDDNERR
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHH
MQLDTLLGAYEEFCEFDTRELALIEPLRGLRMLSHMAWISRRWDDPAFPMYFPWFAEDAY
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHH
WQRQIRDMQAQVAQIAEPPLSLQPF
HHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SAAFHFHTLTPDTILDAIESVGVYPETGLTPLNSFENRVYQFRCDRANRYVAKFYRPQR
CCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHCCCC
WTDKQILEEHAFAFELAEAEVPLAAPVVIEGQSLFHFEDFRFALFPSIGGRQFEMDNLDQ
CCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCEEECCCCCCCEECCCCHHH
LDAVGHFIGRLHQVGKAGHFSERETLSSAMARDALQVLLASPHVPHSLMADFAAAGQALV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SAIESAWIKTDILRLHGDLHPGNILWTPDGPGFVDLDDARSGPAVQDLWMMLAGDDNERR
HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHH
MQLDTLLGAYEEFCEFDTRELALIEPLRGLRMLSHMAWISRRWDDPAFPMYFPWFAEDAY
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHH
WQRQIRDMQAQVAQIAEPPLSLQPF
HHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]