| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is ilvG [H]
Identifier: 119776413
GI number: 119776413
Start: 3896911
End: 3898581
Strand: Reverse
Name: ilvG [H]
Synonym: Sama_3281
Alternate gene names: 119776413
Gene position: 3898581-3896911 (Counterclockwise)
Preceding gene: 119776414
Following gene: 119776412
Centisome position: 90.54
GC content: 59.13
Gene sequence:
>1671_bases ATGGAAGGACAGACGATGAGAGGGGCTGACGCAGTCATCAAGGTATTGGCCGCCCATGGGGTGAACACGGTATTCGGTTA TCCCGGTGGCGCCATCATGCCCATCTACGACGCGCTTTACGGCAGTGAAGTCGAGCACACCCTGTGCCGCCACGAACAGG GTGCCGGCTTTGCTGCCGTGGGCTATGCCCGTGCCAGTGGCAAAACCGGCGTCTGCTTCGCCACCTCTGGCCCCGGCGCC ACCAACCTCATCACCGCCCTTGCCGATGCTCTGCTGGATTCAGTGCCCGTGGTGGCCATCACGGGCCAGGTGTCCACCTC GGTTATCGGCACCGATGCCTTTCAGGAAATCGATGTACTTGGTATGAGCCTGTCCTGCACCAAGCACAGCTTTATGGTGC AAACAGTCGATGAGCTGGTCCCCACGCTGTATCGGGCCTTTGAGCTGGCGGCCTCCGGCCGACCCGGGCCTGTGCTGGTT GACATCCCCAAAGATATTCAAATAGCCAAACTCGAATACAGAGCGCCGCTGTTGGCCGTTGCAGATGAACCCAAAGTTCA GGACGCCGACATCGATGCCGCCCGCGCCCTGATAGCGGCCGCCAAAAAGCCCATGTTGTACGTAGGCGGTGGTGTGGGTA TGGCCGGCGCTGTCGAGCCGCTGCGCCATTTTATCAAGGCCACCTATATGCCGTCCGTGGCTACCCTCAAGGGCCTTGGT GCTATCCCCCATGGCACACCTGGCTACCTGGGCATGCTGGGGATGCACGGCGGCAAGGCCGCTAACCTTGCGGTGCAGGA ATGTGATTTGCTGATGGTGGTTGGCGCCCGTTTCGATGACCGCGTTACCGGCCGTTTGGCCTCATTTGCGCCCAATGCAA AAGTGCTGCATCTGGATATAGATGCCGCCGAGCTTGGCAAGCTGCGTCAGCCCGATGTGGCCATTGCCGCCGAGCTGCGT GTGGTGTTGCCAATGCTTGAGATGCAGCTTGATATAGACCCTTGGCGCGCTGAGGTCGAAGCGCTCGCCGCCGAACACCG CTGGGATTACAACCACCCCGGCAGCCTCATCTACGCCCCTGCCATGCTGCGCCGTTTGGCCAACAAGTTGCCCGAGGACA GCGTAGTGAGCTGCGATGTGGGCCAGCACCAGATGTGGGTTGCTCAGCATATGCACTTCCGCCGCCCTGAAGATCATTTG TCCAGTGCAGGTCTTGGCACCATGGGTTTTGGCTTGCCAGCTGCCATAGGCGCTCAGATGGCGCGCCCCGATGCCACCGT GGTGGCTGTGTCAGGCGATGGCTCTTTCATGATGAATGTGCAGGAACTGACTACCATCAAACGCCGCAAGCTGCCGGTGA AAATCCTGCTTATCGACAACCAGCGTTTGGGCATGGTGAAGCAGTGGCAACAGCTGTTTTTTGAAGAGCGTTACAGCGAA ACCAACCTGTCAGACAACCCGGATTTTGTTGCGCTGGCGTCGGCCTTTGATATCCCCGGGCGCACCATTTTTGCCGCCGA AGAAGTGGAAGAAGCCCTGACCGAAATGCTCACCAGTAAGGGGCCTTACCTCTTGCACGTGGCCATAGATGATGCCTTTA ACGTTTGGCCCCTGGTTCCGCCGGGTGCCTCCAACAGCGATATGATGGAAGAAATGGAGAGAAGCACATGA
Upstream 100 bases:
>100_bases GAAAGAAGTTGCAGAAAAGCCCCCCGCTCCGACAGGACCGGGGGGTTTCTCGTTTCAGGGCATTAAAAAACTAGCGTACA GGCGCAGGGCAGGAAATCAG
Downstream 100 bases:
>100_bases ACCATAATCTGGAAGTCACCATGGCACAGCGTCCCGAAGTGGTTGAGCGTGTGCTGAGGGTTGTTCGCCACAGGGGATTT ACCCTGACCAACATGAATAT
Product: acetolactate synthase 2 catalytic subunit
Products: NA
Alternate protein names: AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit [H]
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MEGQTMRGADAVIKVLAAHGVNTVFGYPGGAIMPIYDALYGSEVEHTLCRHEQGAGFAAVGYARASGKTGVCFATSGPGA TNLITALADALLDSVPVVAITGQVSTSVIGTDAFQEIDVLGMSLSCTKHSFMVQTVDELVPTLYRAFELAASGRPGPVLV DIPKDIQIAKLEYRAPLLAVADEPKVQDADIDAARALIAAAKKPMLYVGGGVGMAGAVEPLRHFIKATYMPSVATLKGLG AIPHGTPGYLGMLGMHGGKAANLAVQECDLLMVVGARFDDRVTGRLASFAPNAKVLHLDIDAAELGKLRQPDVAIAAELR VVLPMLEMQLDIDPWRAEVEALAAEHRWDYNHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMHFRRPEDHL SSAGLGTMGFGLPAAIGAQMARPDATVVAVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQRLGMVKQWQQLFFEERYSE TNLSDNPDFVALASAFDIPGRTIFAAEEVEEALTEMLTSKGPYLLHVAIDDAFNVWPLVPPGASNSDMMEEMERST
Sequences:
>Translated_556_residues MEGQTMRGADAVIKVLAAHGVNTVFGYPGGAIMPIYDALYGSEVEHTLCRHEQGAGFAAVGYARASGKTGVCFATSGPGA TNLITALADALLDSVPVVAITGQVSTSVIGTDAFQEIDVLGMSLSCTKHSFMVQTVDELVPTLYRAFELAASGRPGPVLV DIPKDIQIAKLEYRAPLLAVADEPKVQDADIDAARALIAAAKKPMLYVGGGVGMAGAVEPLRHFIKATYMPSVATLKGLG AIPHGTPGYLGMLGMHGGKAANLAVQECDLLMVVGARFDDRVTGRLASFAPNAKVLHLDIDAAELGKLRQPDVAIAAELR VVLPMLEMQLDIDPWRAEVEALAAEHRWDYNHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMHFRRPEDHL SSAGLGTMGFGLPAAIGAQMARPDATVVAVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQRLGMVKQWQQLFFEERYSE TNLSDNPDFVALASAFDIPGRTIFAAEEVEEALTEMLTSKGPYLLHVAIDDAFNVWPLVPPGASNSDMMEEMERST >Mature_556_residues MEGQTMRGADAVIKVLAAHGVNTVFGYPGGAIMPIYDALYGSEVEHTLCRHEQGAGFAAVGYARASGKTGVCFATSGPGA TNLITALADALLDSVPVVAITGQVSTSVIGTDAFQEIDVLGMSLSCTKHSFMVQTVDELVPTLYRAFELAASGRPGPVLV DIPKDIQIAKLEYRAPLLAVADEPKVQDADIDAARALIAAAKKPMLYVGGGVGMAGAVEPLRHFIKATYMPSVATLKGLG AIPHGTPGYLGMLGMHGGKAANLAVQECDLLMVVGARFDDRVTGRLASFAPNAKVLHLDIDAAELGKLRQPDVAIAAELR VVLPMLEMQLDIDPWRAEVEALAAEHRWDYNHPGSLIYAPAMLRRLANKLPEDSVVSCDVGQHQMWVAQHMHFRRPEDHL SSAGLGTMGFGLPAAIGAQMARPDATVVAVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQRLGMVKQWQQLFFEERYSE TNLSDNPDFVALASAFDIPGRTIFAAEEVEEALTEMLTSKGPYLLHVAIDDAFNVWPLVPPGASNSDMMEEMERST
Specific function: Catalyzes the first step in the biosynthesis of branched-chain amino acids [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=566, Percent_Identity=24.7349823321555, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI21361361, Length=518, Percent_Identity=26.4478764478764, Blast_Score=143, Evalue=5e-34, Organism=Escherichia coli, GI1790104, Length=551, Percent_Identity=46.0980036297641, Blast_Score=482, Evalue=1e-137, Organism=Escherichia coli, GI87081685, Length=573, Percent_Identity=42.7574171029668, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI1786717, Length=561, Percent_Identity=30.8377896613191, Blast_Score=255, Evalue=7e-69, Organism=Escherichia coli, GI1787096, Length=543, Percent_Identity=27.9926335174954, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI1788716, Length=556, Percent_Identity=25.7194244604317, Blast_Score=142, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17531299, Length=490, Percent_Identity=27.9591836734694, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17531301, Length=490, Percent_Identity=27.9591836734694, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17542570, Length=532, Percent_Identity=26.8796992481203, Blast_Score=125, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6323755, Length=585, Percent_Identity=43.0769230769231, Blast_Score=449, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6320588, Length=581, Percent_Identity=21.1703958691911, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6320816, Length=485, Percent_Identity=22.680412371134, Blast_Score=90, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6321524, Length=510, Percent_Identity=23.3333333333333, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6323073, Length=465, Percent_Identity=24.0860215053763, Blast_Score=77, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6323163, Length=481, Percent_Identity=23.2848232848233, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI19922626, Length=499, Percent_Identity=27.8557114228457, Blast_Score=156, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 59640; Mature: 59640
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGQTMRGADAVIKVLAAHGVNTVFGYPGGAIMPIYDALYGSEVEHTLCRHEQGAGFAAV CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEE GYARASGKTGVCFATSGPGATNLITALADALLDSVPVVAITGQVSTSVIGTDAFQEIDVL EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHH GMSLSCTKHSFMVQTVDELVPTLYRAFELAASGRPGPVLVDIPKDIQIAKLEYRAPLLAV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCEEEE ADEPKVQDADIDAARALIAAAKKPMLYVGGGVGMAGAVEPLRHFIKATYMPSVATLKGLG CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC AIPHGTPGYLGMLGMHGGKAANLAVQECDLLMVVGARFDDRVTGRLASFAPNAKVLHLDI CCCCCCCCHHEEEECCCCCCCCEEHHHCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEC DAAELGKLRQPDVAIAAELRVVLPMLEMQLDIDPWRAEVEALAAEHRWDYNHPGSLIYAP CHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHH AMLRRLANKLPEDSVVSCDVGQHQMWVAQHMHFRRPEDHLSSAGLGTMGFGLPAAIGAQM HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHH ARPDATVVAVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQRLGMVKQWQQLFFEERYSE CCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC TNLSDNPDFVALASAFDIPGRTIFAAEEVEEALTEMLTSKGPYLLHVAIDDAFNVWPLVP CCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC PGASNSDMMEEMERST CCCCCHHHHHHHHHCC >Mature Secondary Structure MEGQTMRGADAVIKVLAAHGVNTVFGYPGGAIMPIYDALYGSEVEHTLCRHEQGAGFAAV CCCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEE GYARASGKTGVCFATSGPGATNLITALADALLDSVPVVAITGQVSTSVIGTDAFQEIDVL EEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHH GMSLSCTKHSFMVQTVDELVPTLYRAFELAASGRPGPVLVDIPKDIQIAKLEYRAPLLAV CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCEEEE ADEPKVQDADIDAARALIAAAKKPMLYVGGGVGMAGAVEPLRHFIKATYMPSVATLKGLG CCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC AIPHGTPGYLGMLGMHGGKAANLAVQECDLLMVVGARFDDRVTGRLASFAPNAKVLHLDI CCCCCCCCHHEEEECCCCCCCCEEHHHCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEC DAAELGKLRQPDVAIAAELRVVLPMLEMQLDIDPWRAEVEALAAEHRWDYNHPGSLIYAP CHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEHH AMLRRLANKLPEDSVVSCDVGQHQMWVAQHMHFRRPEDHLSSAGLGTMGFGLPAAIGAQM HHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHH ARPDATVVAVSGDGSFMMNVQELTTIKRRKLPVKILLIDNQRLGMVKQWQQLFFEERYSE CCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC TNLSDNPDFVALASAFDIPGRTIFAAEEVEEALTEMLTSKGPYLLHVAIDDAFNVWPLVP CCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC PGASNSDMMEEMERST CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3550695; 1379743; 9278503; 1995430; 6154938; 7015336; 3897211 [H]