Click here to switch to the map view.

The map label for this gene is 119776340

Identifier: 119776340

GI number: 119776340

Start: 3797742

End: 3798278

Strand: Direct

Name: 119776340

Synonym: Sama_3208

Alternate gene names: NA

Gene position: 3797742-3798278 (Clockwise)

Preceding gene: 119776339

Following gene: 119776341

Centisome position: 88.19

GC content: 54.56

Gene sequence:

>537_bases
ATGCGCAGCTTATGGCTATTGGCCCTCGGCCTGACTTCTCTCTCTGCATCCGCTTCTGTTGAACAAGGTCTGGCCCAGTG
TGCTGCGGTTCAGGATAAACTCGACCGTCTTATCTGTTACGACAAACTGGCTGAAAGTGTGGCCAAGGTGCCAGCGGTGA
CGGTTGCCCAGCCCCAGGTCGCAGCACCGGTTGCGGCTGTTGCAGCTCCTGCACCTGTGGTCCCCGCGACTGTGAGCGCC
GCACCAGTTGCCCCTGTATCTCAAGCCGCGCCAACCGTAGAAGAGAGTTTCGGTAAGGTAAAAAAGACCGAAGCGGAGCC
TGAGCGTATTGAACTGGTGATTTCTGCGGTGGACACAGACGCCTATAACAACCTCAAGATAAGCTTTACCAATGGCCAGG
TGTGGAAACAAACCGACGGCCGCAAGTTCAAGCTGAAAAGCGGTGAGAGTGTTTACATTGAAAAAGGTGCACTGGGCGCA
TTCTATCTGGGCCTCGAAAGCCGCAATACCACCATCAGGGTAAAACGCCTTAAGTAA

Upstream 100 bases:

>100_bases
GACTGACACCAGTGGCATGTGACCCTGTTTTATCGGCCTGTCCCGTCTGGGTTGGGCCGATTTTGTTATTAATGCCAAGG
TAGAAATACAAGGACAACTT

Downstream 100 bases:

>100_bases
CTATTTCATTATCTTAAGTGAATATGCCCCGTTATCTGGACATTGCCGTTAACCTGATTGGCAGTGCCCTCGAATCCGAC
ATTGAGGCCGTAATCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRSLWLLALGLTSLSASASVEQGLAQCAAVQDKLDRLICYDKLAESVAKVPAVTVAQPQVAAPVAAVAAPAPVVPATVSA
APVAPVSQAAPTVEESFGKVKKTEAEPERIELVISAVDTDAYNNLKISFTNGQVWKQTDGRKFKLKSGESVYIEKGALGA
FYLGLESRNTTIRVKRLK

Sequences:

>Translated_178_residues
MRSLWLLALGLTSLSASASVEQGLAQCAAVQDKLDRLICYDKLAESVAKVPAVTVAQPQVAAPVAAVAAPAPVVPATVSA
APVAPVSQAAPTVEESFGKVKKTEAEPERIELVISAVDTDAYNNLKISFTNGQVWKQTDGRKFKLKSGESVYIEKGALGA
FYLGLESRNTTIRVKRLK
>Mature_178_residues
MRSLWLLALGLTSLSASASVEQGLAQCAAVQDKLDRLICYDKLAESVAKVPAVTVAQPQVAAPVAAVAAPAPVVPATVSA
APVAPVSQAAPTVEESFGKVKKTEAEPERIELVISAVDTDAYNNLKISFTNGQVWKQTDGRKFKLKSGESVYIEKGALGA
FYLGLESRNTTIRVKRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18839; Mature: 18839

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLWLLALGLTSLSASASVEQGLAQCAAVQDKLDRLICYDKLAESVAKVPAVTVAQPQV
CCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCH
AAPVAAVAAPAPVVPATVSAAPVAPVSQAAPTVEESFGKVKKTEAEPERIELVISAVDTD
HCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCC
AYNNLKISFTNGQVWKQTDGRKFKLKSGESVYIEKGALGAFYLGLESRNTTIRVKRLK
CCCCEEEEEECCEEEECCCCCEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MRSLWLLALGLTSLSASASVEQGLAQCAAVQDKLDRLICYDKLAESVAKVPAVTVAQPQV
CCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCH
AAPVAAVAAPAPVVPATVSAAPVAPVSQAAPTVEESFGKVKKTEAEPERIELVISAVDTD
HCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCC
AYNNLKISFTNGQVWKQTDGRKFKLKSGESVYIEKGALGAFYLGLESRNTTIRVKRLK
CCCCEEEEEECCEEEECCCCCEEEECCCCEEEEECCCCEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA