| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is zraS [C]
Identifier: 119776319
GI number: 119776319
Start: 3778866
End: 3780137
Strand: Reverse
Name: zraS [C]
Synonym: Sama_3187
Alternate gene names: 119776319
Gene position: 3780137-3778866 (Counterclockwise)
Preceding gene: 119776320
Following gene: 119776318
Centisome position: 87.78
GC content: 58.65
Gene sequence:
>1272_bases ATGGCGCGGGGCTCACCTGTGTATTCACCGCTGGCTGCCAATCAGCTCATCACCCTCAGGGCTTTGGGATTGGTGTTGCA ATTGGTGCTGACCTTTTTTGGTGCCGATGCCTTTGGGCTCTCGCTGCAGCAGAGTGCACTCGTGTATATCTTTGGCCTCG AACTGCTGTTTCTGGGGCTGACACTCAAGCTAAGGCATGCACTGGTGCTCAGTGCACCCGGGCTTTTTTTGAGCCTTCTT ATCGATACCCTGCTGTGGATTTCCTGGCTATATTTCAGCGGCGGTGCCACCAACGCCTTTATATCCCTGCTGTTGCTGCC CATTGCCATTGCCGCCGTCACCCTGCCTTTCTGGGCGCCCTGGACTCTGGCGGCCATCACCACCCTTGCCTATAGCCTGA TGTTGTATGCGGTGCCTGCCATGGAGGGGGGACACCATGAACATGCAGGCCATATGGCGGGTGGCAGTATGGCCTCTCAT TACGTGGGTATGTGGTTTAACTTTTTACTCAGTGCGCTTGTACTTACCACCAGCGTGGCCCTGATTGCGAGAAGGCTCAG GCAAACAGATGCAGAGCTGGCGGCGCTGCGGGAGTCCCAGCTTCGGCAGGAACAGCTGATTGCCCTGGGCACAGCGTCGG CGCAGATGAGCCATCAGCTCGCCACGCCCCTGGCAAGCCTGAGATTGTTGTTGGACGAAGTGGCCGAGGGCGACACTGAG CCTGGGCTGGTGGCGGAAATGGATCTTGCCCTGACGCGCTGTGAAACCAGCCTCAATAGCCTCAGAGAAGCTACCGAAGC CATACGGGAGCGCAAACTGACGGTGGTCAGTGCCGGACAGCTTTTGCACTTACTCAAGCAGCAGGTGTTGCTGCTGATGC CGGACGTGGTAATGGATATCAGCCTGAGCGACGAGGTGGCAGGGGCACGGCTTTCAACGGATGTGAGCTTGCTGCCCTCG TTGTTGGCGCTGGTGGACAATGGCGCCAAAGCCTCCAAAAAACATGGCGGCGAGGCTCGGGTATGGCTCAGCGCCCGTTT GGTGAATGAGGCGTGCATTCGCCTCGATATACGCGATGCCGGTCCTGGTATTGACGCTCAAAAACTCACGGCCCTTGGTG CCAGACCCGTTTTGAGCGAGCAGGGGCTGGGGATGGCGCTGATGTTGAGCCACGCCAGTCTTGAGCGTCTCGGCGGCGAG CTGCATTTGGGGAACCTGCCTGAGGGAGGTTGTCTTGCCAGCGTGCGCTTGCCTCTGGAGCAGAGCTCATGA
Upstream 100 bases:
>100_bases TTAACGTTAAAGTCACTGCGTCAGATTTGTTCTGGCGCAGTGTCAGGGCGGTCCAAACTCGTTAGACTAATGGCGATTCT TATCTTCGCAAGGATGTTTT
Downstream 100 bases:
>100_bases GCATGATGCCTAAATTGTTGATTATTGAAGATGATATGGCCTATGGTGCCGTACTCAGTCGCCGCATGAGTCGGCAGGGA TTTGAATGTCGCCATGTCAG
Product: sensor histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Histidine Kinase; Two-Component Sensor; Sensory Transduction Protein Kinase; Sensor Protein; Signal Transduction Histidine Kinase; Two-Component System Sensor Protein; Two-Component Sensor Histidine Kinase; Two-Component Sensor Histidine Protein Kinase; Two-Component System Sensor Kinase; Periplasmic Sensory Histidine Protein Kinase; ATPase Domain-Containing Protein; ATPase-Like Histidine Kinase A; Two-Component Regulatory System Sensor Kinase Protein
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLL IDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASH YVGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPS LLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGE LHLGNLPEGGCLASVRLPLEQSS
Sequences:
>Translated_423_residues MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLL IDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASH YVGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPS LLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGE LHLGNLPEGGCLASVRLPLEQSS >Mature_422_residues ARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGLTLKLRHALVLSAPGLFLSLLI DTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAPWTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHY VGMWFNFLLSALVLTTSVALIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTEP GLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDISLSDEVAGARLSTDVSLLPSL LALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDAGPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGEL HLGNLPEGGCLASVRLPLEQSS
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. May Function As A Membrane-Associated Protein Kinase That Phosphorylates Zrar In Response To High Concentrations Of Zinc Or Lead In The Medium. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.3.- [C]
Molecular weight: Translated: 45198; Mature: 45066
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH TLKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH WTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCHHHHCC SLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDA CCCCHHCCCHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHEEEEECC GPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLPLE CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCC QSS CCC >Mature Secondary Structure ARGSPVYSPLAANQLITLRALGLVLQLVLTFFGADAFGLSLQQSALVYIFGLELLFLGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH TLKLRHALVLSAPGLFLSLLIDTLLWISWLYFSGGATNAFISLLLLPIAIAAVTLPFWAP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH WTLAAITTLAYSLMLYAVPAMEGGHHEHAGHMAGGSMASHYVGMWFNFLLSALVLTTSVA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LIARRLRQTDAELAALRESQLRQEQLIALGTASAQMSHQLATPLASLRLLLDEVAEGDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PGLVAEMDLALTRCETSLNSLREATEAIRERKLTVVSAGQLLHLLKQQVLLLMPDVVMDI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHCCHHHHCC SLSDEVAGARLSTDVSLLPSLLALVDNGAKASKKHGGEARVWLSARLVNEACIRLDIRDA CCCCHHCCCHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHEEEEECC GPGIDAQKLTALGARPVLSEQGLGMALMLSHASLERLGGELHLGNLPEGGCLASVRLPLE CCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCC QSS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA