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The map label for this gene is 119776310

Identifier: 119776310

GI number: 119776310

Start: 3768010

End: 3768339

Strand: Direct

Name: 119776310

Synonym: Sama_3178

Alternate gene names: NA

Gene position: 3768010-3768339 (Clockwise)

Preceding gene: 119776305

Following gene: 119776311

Centisome position: 87.5

GC content: 52.73

Gene sequence:

>330_bases
ATGATGAAAACGACCCACTCCATTGGCCTTGGACTGCTCCTTGGCCTGATCCTCGGCAGCAGCGCTATGGCAGCCGATGG
CGGTAATCCCAAGAAAGGTAAACACCTGTACAAGAAAGAATGCAAAACCTGCCACAGCAAAGGTGACGCAGCCGGTGAAC
TCACCCCCATGAGCAAAACCATGGCCCAATGGGACAGATTCTTCGAAAAGGATATGCACAAGGGCAAACCCGAAGTATTC
CAAAAGCTGTCTGAGCAGGAACTGAAAGACGTACAGCAGTTTCTCTATGACCACGCTGCCGACTCGGACCAACCGCAGAC
CTGCGGCTAA

Upstream 100 bases:

>100_bases
TTCTCCTTATCGTCCTTTGTTAAATTTTAGCCAACAGGAAATGAGGGAGCCCGGCTCCCCGTTCAGGGAAGAAAACCAGC
CAACCCGCGAAAGGAAGATG

Downstream 100 bases:

>100_bases
CCCCAAGCGGATAAGCCTCGCCCGACAATAACGGGCAAACACCAGAAAAAACTTCCCGGGTTGCGGGATGCATGGGGCAA
ACCCCAGGGCCTGTTACAAC

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MMKTTHSIGLGLLLGLILGSSAMAADGGNPKKGKHLYKKECKTCHSKGDAAGELTPMSKTMAQWDRFFEKDMHKGKPEVF
QKLSEQELKDVQQFLYDHAADSDQPQTCG

Sequences:

>Translated_109_residues
MMKTTHSIGLGLLLGLILGSSAMAADGGNPKKGKHLYKKECKTCHSKGDAAGELTPMSKTMAQWDRFFEKDMHKGKPEVF
QKLSEQELKDVQQFLYDHAADSDQPQTCG
>Mature_109_residues
MMKTTHSIGLGLLLGLILGSSAMAADGGNPKKGKHLYKKECKTCHSKGDAAGELTPMSKTMAQWDRFFEKDMHKGKPEVF
QKLSEQELKDVQQFLYDHAADSDQPQTCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12029; Mature: 12029

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTTHSIGLGLLLGLILGSSAMAADGGNPKKGKHLYKKECKTCHSKGDAAGELTPMSKT
CCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
MAQWDRFFEKDMHKGKPEVFQKLSEQELKDVQQFLYDHAADSDQPQTCG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMKTTHSIGLGLLLGLILGSSAMAADGGNPKKGKHLYKKECKTCHSKGDAAGELTPMSKT
CCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
MAQWDRFFEKDMHKGKPEVFQKLSEQELKDVQQFLYDHAADSDQPQTCG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA