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The map label for this gene is ycaQ [H]

Identifier: 119776233

GI number: 119776233

Start: 3674804

End: 3675988

Strand: Reverse

Name: ycaQ [H]

Synonym: Sama_3101

Alternate gene names: 119776233

Gene position: 3675988-3674804 (Counterclockwise)

Preceding gene: 119776234

Following gene: 119776232

Centisome position: 85.37

GC content: 56.29

Gene sequence:

>1185_bases
ATGACCAACAAAAACGTTTCTCCCTTTTCAGCCGACGAGTGGCGCGCCATCAATATTGCCGCACAGGGGCTGATTGATGC
GCCAGGGGATGTGACCGAGTGCATTGCCCGCCTGGGGTATGTGCAGATTGATTCTATCCAGGTAGCTGCCCGGGCTCATG
ACCATGTGCTTCACAGCCGTCTGGCCGATTTTCGCCCCGAGGCACTGGCTGGAGCCGTTGCCGACAAGTCCATATTTGAA
TACTGGTCCCATGCGGCGGCGTATCTGCCCATGCGTGACTACAGGTTCAGTCTGCCAAGGAAGCTGGCACTTCGAAACGG
TGAGCGCCACTGGTTCGAGCGTGACAGCCGGGAAATGCGCGAAGTACTCAGCCGGATTCGGGCCGAAGGGCCGCTAAAGG
CATCGGACTTTGAAGCGCCGCCGGGTAAGGCCGGTGCCTGGTGGGACTGGAAGCCTGCCAAGAAAGCACTTGAACAGCTT
TTTATGGAAGGCGATCTGATGGTGGCTCGCCGTGACGGGTTTCAAAAGGTCTACGACTTGACGGAACGGGTGCTGCCCAG
GGGCGTGGATGACAGGGTGCCCAGCGACGATGAATACGGTCGTTATCTGGTGCAGAGCTTTTTGCGTGCCCATGGCCATG
GCAGCCTGGCCGAAATCTGCTATTTGCGCCGCAATGTGAAGCCGCTCGTGAAAAGAGTCATTGCCGACATGCTCGAAAAC
GGCGAACTGTCGAGTTTTATCAGCGACGGCAAACCCAGATATTACAGACGCAATATTGCGCCTGTGCCACTGCCTTCAAG
GGTTTGGTTGCTCAATCCCTTCGATAACCTGCTTATTCAGCGAAATCGCCTGAAACAGTGGTTCGACTTTGATTACCAGA
TAGAGGTCTATGTGCCCGAGCCCAAACGGCGGTTTGGTTATTACAGTCTGGGCATTCTCTGGCGGGATACCTTCGTTGGA
CGGGTGGATGTGAAGGCCGACCGGGAGAAGGGATTGCTGCGCTTAAGGCGACTGACATTGGAGGATGCCGCCTATGATAA
GTCAGGGTCGCTGCAGCCCTTTTTAGCGCCCATGGAGCAGGCATTGGCTGAGTTTTGCCGTTTCAACGGCCTGGCCCGCT
GGAAACTGGAAGCCGCCAGCGATAAGCAGCTAAAACGCCATTATGCCCGTCAGGTGTGGATCTGA

Upstream 100 bases:

>100_bases
CCGGGTATGCTGATACCCAGATAGCTCCCCTTGCGAAGGCCTGCATTCGTCGGCAAGATGGGTTCATCTCTGCCCTATTG
CCAGCCCCATAGCCAGCGCC

Downstream 100 bases:

>100_bases
CCCAAGAGCTTTTACCTTAGCTTTTAAAAGTGCTTTTAACTTAGCTTTGCATAAGGCCTTTGCAGCCGGGAGCCGTCGCT
GGCATCATGTTGCGCGTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MTNKNVSPFSADEWRAINIAAQGLIDAPGDVTECIARLGYVQIDSIQVAARAHDHVLHSRLADFRPEALAGAVADKSIFE
YWSHAAAYLPMRDYRFSLPRKLALRNGERHWFERDSREMREVLSRIRAEGPLKASDFEAPPGKAGAWWDWKPAKKALEQL
FMEGDLMVARRDGFQKVYDLTERVLPRGVDDRVPSDDEYGRYLVQSFLRAHGHGSLAEICYLRRNVKPLVKRVIADMLEN
GELSSFISDGKPRYYRRNIAPVPLPSRVWLLNPFDNLLIQRNRLKQWFDFDYQIEVYVPEPKRRFGYYSLGILWRDTFVG
RVDVKADREKGLLRLRRLTLEDAAYDKSGSLQPFLAPMEQALAEFCRFNGLARWKLEAASDKQLKRHYARQVWI

Sequences:

>Translated_394_residues
MTNKNVSPFSADEWRAINIAAQGLIDAPGDVTECIARLGYVQIDSIQVAARAHDHVLHSRLADFRPEALAGAVADKSIFE
YWSHAAAYLPMRDYRFSLPRKLALRNGERHWFERDSREMREVLSRIRAEGPLKASDFEAPPGKAGAWWDWKPAKKALEQL
FMEGDLMVARRDGFQKVYDLTERVLPRGVDDRVPSDDEYGRYLVQSFLRAHGHGSLAEICYLRRNVKPLVKRVIADMLEN
GELSSFISDGKPRYYRRNIAPVPLPSRVWLLNPFDNLLIQRNRLKQWFDFDYQIEVYVPEPKRRFGYYSLGILWRDTFVG
RVDVKADREKGLLRLRRLTLEDAAYDKSGSLQPFLAPMEQALAEFCRFNGLARWKLEAASDKQLKRHYARQVWI
>Mature_393_residues
TNKNVSPFSADEWRAINIAAQGLIDAPGDVTECIARLGYVQIDSIQVAARAHDHVLHSRLADFRPEALAGAVADKSIFEY
WSHAAAYLPMRDYRFSLPRKLALRNGERHWFERDSREMREVLSRIRAEGPLKASDFEAPPGKAGAWWDWKPAKKALEQLF
MEGDLMVARRDGFQKVYDLTERVLPRGVDDRVPSDDEYGRYLVQSFLRAHGHGSLAEICYLRRNVKPLVKRVIADMLENG
ELSSFISDGKPRYYRRNIAPVPLPSRVWLLNPFDNLLIQRNRLKQWFDFDYQIEVYVPEPKRRFGYYSLGILWRDTFVGR
VDVKADREKGLLRLRRLTLEDAAYDKSGSLQPFLAPMEQALAEFCRFNGLARWKLEAASDKQLKRHYARQVWI

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=381, Percent_Identity=33.0708661417323, Blast_Score=190, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45703; Mature: 45572

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKNVSPFSADEWRAINIAAQGLIDAPGDVTECIARLGYVQIDSIQVAARAHDHVLHSR
CCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
LADFRPEALAGAVADKSIFEYWSHAAAYLPMRDYRFSLPRKLALRNGERHWFERDSREMR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
EVLSRIRAEGPLKASDFEAPPGKAGAWWDWKPAKKALEQLFMEGDLMVARRDGFQKVYDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
TERVLPRGVDDRVPSDDEYGRYLVQSFLRAHGHGSLAEICYLRRNVKPLVKRVIADMLEN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
GELSSFISDGKPRYYRRNIAPVPLPSRVWLLNPFDNLLIQRNRLKQWFDFDYQIEVYVPE
CCHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECC
PKRRFGYYSLGILWRDTFVGRVDVKADREKGLLRLRRLTLEDAAYDKSGSLQPFLAPMEQ
HHHHCCEEEEHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALAEFCRFNGLARWKLEAASDKQLKRHYARQVWI
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNKNVSPFSADEWRAINIAAQGLIDAPGDVTECIARLGYVQIDSIQVAARAHDHVLHSR
CCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHH
LADFRPEALAGAVADKSIFEYWSHAAAYLPMRDYRFSLPRKLALRNGERHWFERDSREMR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCHHHHHHHHHHHH
EVLSRIRAEGPLKASDFEAPPGKAGAWWDWKPAKKALEQLFMEGDLMVARRDGFQKVYDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
TERVLPRGVDDRVPSDDEYGRYLVQSFLRAHGHGSLAEICYLRRNVKPLVKRVIADMLEN
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHCC
GELSSFISDGKPRYYRRNIAPVPLPSRVWLLNPFDNLLIQRNRLKQWFDFDYQIEVYVPE
CCHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEECC
PKRRFGYYSLGILWRDTFVGRVDVKADREKGLLRLRRLTLEDAAYDKSGSLQPFLAPMEQ
HHHHCCEEEEHEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALAEFCRFNGLARWKLEAASDKQLKRHYARQVWI
HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]