The gene/protein map for NC_008700 is currently unavailable.
Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776145

Identifier: 119776145

GI number: 119776145

Start: 3586447

End: 3587643

Strand: Reverse

Name: 119776145

Synonym: Sama_3013

Alternate gene names: NA

Gene position: 3587643-3586447 (Counterclockwise)

Preceding gene: 119776146

Following gene: 119776144

Centisome position: 83.31

GC content: 53.55

Gene sequence:

>1197_bases
ATGCTAAAAATGACAGGTGAAATCGGCTTTATACACCAGCGGGAGTATACAGAGGTGGCTATTGGCGCAACGGGCGGAGT
TAAGCCCGGCAGTATTCTGGCATTGGAGCGGCGTTTATACCGGCAGTTGATTGTCGGTAAGCAGAAAATGCCCAGAATTC
AGGATGAGTTGGATCGGGAACTCGAATCCGTTGTCTTCAAGCTGGATATCGAGCGTGCCGCCGTTTTTGAGCGCATCGAG
CGGCAGCAAAAGGCCCGTGAAGTGTTCGAAGCCGTATCCAAACAGCTCACCGATACCATCATGGATGAGATAAAGCTGAC
ACTCGGCGATATGGACAGATTGCTGCAGCGTTCCAGTCTGACCGAGACTCAGCTCGCGCTGTTTGAACAACTCTGCAAAG
CTAACCCGGAACTTGGCCGTATTCGCCTGCTCATGAGCGGTATTGGCTGGTTATCCCGTGACTTGACCAATGTGGTCAAC
AGCACCGCATTTCGCCAGCGTCATCCCCAGCGCGCCGATGTACGGGTGACCGATATCAAGCTGGTGCTCAACTTTATCGG
GGTGGAAAACCTGCGTCAGTTGGTGCCTTATTACAGCATGCGCAACTGGTTGCCCTCGGGCCATTCCTGTCTGCTGTGGC
CCAATCGCAAGCTATGGCAATATGCGCTGGCCTGTGCCACTGCCGCCAAAGCCCTGGCCAAACTCCATGAATCCAATGAA
ACTCTGGCATTTATCAGCGCCTTCCTCGAGCAGTTTGGTATTACCATGGTGCTCGGTACTGCATCTGCCATTTATGAAAA
AAATTGGGGCAATTGGCTCCGGGAGGCCAGTGCCAGTCGGGACAAGGAACTCTATGATGCGGTCATGGCCACCGAGTTTC
CCGCGGAAAAGGTACTGGAAGAGGTGCTGCTCCATTCCAGCAGGCTCGCCTGGGAAATTCCGGCCAGGCTGAACTTTGCC
GACCATGCTCTGACGCTGAATCTCAAGGCGTTGGATGAATCCCTCACTGTCACCGATATGCCCATGGATGCCCAAATTCT
GGCCAAGGCCACGTGTTTCGTCAGGGTGATGACGCTGGAAGAGAGCAATTTGCTCGAACCCCAGGAGGCTCGGGAAATGT
ACCGTTACTATGGTCTCAGTGAGCAGGAAATACTGCGCTTGAAGGCGCAAAATTACCGCAGAATGGAACTCTTCTGA

Upstream 100 bases:

>100_bases
ACGGTCGTTAAACTCAGGGCCTGCGGGCCCTGTTTTTTATTGAAAATTGGTCGCCTGTCAGTAAGTTGGCAAAATATCAG
TCTCTCTCCTTGGCCGATTT

Downstream 100 bases:

>100_bases
AACGCGTTGTTCGGGGCGTTAGCCGAACATCCGGCAAAGCAGTACAAGCAGGAGCTCAGTATGGCTAGTTGGCAGGCAAA
GGTGCTTAACAGTGTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Hydrolase HDOD

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLKMTGEIGFIHQREYTEVAIGATGGVKPGSILALERRLYRQLIVGKQKMPRIQDELDRELESVVFKLDIERAAVFERIE
RQQKAREVFEAVSKQLTDTIMDEIKLTLGDMDRLLQRSSLTETQLALFEQLCKANPELGRIRLLMSGIGWLSRDLTNVVN
STAFRQRHPQRADVRVTDIKLVLNFIGVENLRQLVPYYSMRNWLPSGHSCLLWPNRKLWQYALACATAAKALAKLHESNE
TLAFISAFLEQFGITMVLGTASAIYEKNWGNWLREASASRDKELYDAVMATEFPAEKVLEEVLLHSSRLAWEIPARLNFA
DHALTLNLKALDESLTVTDMPMDAQILAKATCFVRVMTLEESNLLEPQEAREMYRYYGLSEQEILRLKAQNYRRMELF

Sequences:

>Translated_398_residues
MLKMTGEIGFIHQREYTEVAIGATGGVKPGSILALERRLYRQLIVGKQKMPRIQDELDRELESVVFKLDIERAAVFERIE
RQQKAREVFEAVSKQLTDTIMDEIKLTLGDMDRLLQRSSLTETQLALFEQLCKANPELGRIRLLMSGIGWLSRDLTNVVN
STAFRQRHPQRADVRVTDIKLVLNFIGVENLRQLVPYYSMRNWLPSGHSCLLWPNRKLWQYALACATAAKALAKLHESNE
TLAFISAFLEQFGITMVLGTASAIYEKNWGNWLREASASRDKELYDAVMATEFPAEKVLEEVLLHSSRLAWEIPARLNFA
DHALTLNLKALDESLTVTDMPMDAQILAKATCFVRVMTLEESNLLEPQEAREMYRYYGLSEQEILRLKAQNYRRMELF
>Mature_398_residues
MLKMTGEIGFIHQREYTEVAIGATGGVKPGSILALERRLYRQLIVGKQKMPRIQDELDRELESVVFKLDIERAAVFERIE
RQQKAREVFEAVSKQLTDTIMDEIKLTLGDMDRLLQRSSLTETQLALFEQLCKANPELGRIRLLMSGIGWLSRDLTNVVN
STAFRQRHPQRADVRVTDIKLVLNFIGVENLRQLVPYYSMRNWLPSGHSCLLWPNRKLWQYALACATAAKALAKLHESNE
TLAFISAFLEQFGITMVLGTASAIYEKNWGNWLREASASRDKELYDAVMATEFPAEKVLEEVLLHSSRLAWEIPARLNFA
DHALTLNLKALDESLTVTDMPMDAQILAKATCFVRVMTLEESNLLEPQEAREMYRYYGLSEQEILRLKAQNYRRMELF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45735; Mature: 45735

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKMTGEIGFIHQREYTEVAIGATGGVKPGSILALERRLYRQLIVGKQKMPRIQDELDRE
CCEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LESVVFKLDIERAAVFERIERQQKAREVFEAVSKQLTDTIMDEIKLTLGDMDRLLQRSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TETQLALFEQLCKANPELGRIRLLMSGIGWLSRDLTNVVNSTAFRQRHPQRADVRVTDIK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH
LVLNFIGVENLRQLVPYYSMRNWLPSGHSCLLWPNRKLWQYALACATAAKALAKLHESNE
HHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
TLAFISAFLEQFGITMVLGTASAIYEKNWGNWLREASASRDKELYDAVMATEFPAEKVLE
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
EVLLHSSRLAWEIPARLNFADHALTLNLKALDESLTVTDMPMDAQILAKATCFVRVMTLE
HHHHHCCCCEEECCCCCCCCCCEEEEEHHHHCCCCEEECCCCCHHHHHHHHHHHEEEEEC
ESNLLEPQEAREMYRYYGLSEQEILRLKAQNYRRMELF
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKMTGEIGFIHQREYTEVAIGATGGVKPGSILALERRLYRQLIVGKQKMPRIQDELDRE
CCEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LESVVFKLDIERAAVFERIERQQKAREVFEAVSKQLTDTIMDEIKLTLGDMDRLLQRSSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TETQLALFEQLCKANPELGRIRLLMSGIGWLSRDLTNVVNSTAFRQRHPQRADVRVTDIK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHH
LVLNFIGVENLRQLVPYYSMRNWLPSGHSCLLWPNRKLWQYALACATAAKALAKLHESNE
HHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
TLAFISAFLEQFGITMVLGTASAIYEKNWGNWLREASASRDKELYDAVMATEFPAEKVLE
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
EVLLHSSRLAWEIPARLNFADHALTLNLKALDESLTVTDMPMDAQILAKATCFVRVMTLE
HHHHHCCCCEEECCCCCCCCCCEEEEEHHHHCCCCEEECCCCCHHHHHHHHHHHEEEEEC
ESNLLEPQEAREMYRYYGLSEQEILRLKAQNYRRMELF
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA