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The map label for this gene is ybeQ [C]

Identifier: 119776135

GI number: 119776135

Start: 3576053

End: 3576829

Strand: Reverse

Name: ybeQ [C]

Synonym: Sama_3003

Alternate gene names: 119776135

Gene position: 3576829-3576053 (Counterclockwise)

Preceding gene: 119776140

Following gene: 119776131

Centisome position: 83.06

GC content: 56.89

Gene sequence:

>777_bases
GTGAAGTACTGGCAAGTTGTGACTGCGGCCACCGTGCTGTTATTGAATATGGGATCGGCACAGGCGTTTTCATTGCCCAG
ACCCGATAGTGACCAGGCTGCTGGTAAGTTGTTGCACATTGAGATGCGTGCAGTGCAGGATGATGCCGATGCCCAGTTTT
TGCTGGGGCTCATGTATGTCTCCGGTCGTTACGTGGATAAGGCGCCTGAACTGGGATTGGAGTGGATTGGCCGTGCAGCC
AGTCAGGGACACGCCAAGGCGCAACAGACACTGGCCGACTTGCGCTTTGAAGGCCAGCTGGTAGCGCGCAATCTTGCCGA
AGCCGAACATTGGTATTTGCAAATGAGCCTGCGTGGTGAGCGCTGGGCCAATTTTCGCCTCGGTTTTATTTATGCTGCCG
GCGGTGACGGAGTAGAGCGCAATTGCGGCCGTGCGGTCGAGCAGTTCCAGCTGGTGGGAGACGAGGTGTCTCTTGGCAAC
GTGGCCTGGATATTGGCGACCTGTCCTGAAGCCCGGTACCGTGATGGCAACAAGGCCGTGACTCTGGCGCTGAAACTGTT
GGAAAACGATGCCAATGACCCAACCAATCTGGATAACCTGGCGGCCGCTTACGCAGAGCAGGGCGACTTCAACCGGGCCG
TTGCCGTGCAGGAGAAAGCCATCTCGGCATTGGAGCTGAAAAAGCAGGCCGACATCAAGGCAGAGGAGTTTCATCAGCGA
CTGCAACATTATCAGCAGGGCAAGCCCTACCGTGAAGTGATCCCGCTTCAGCCCTGA

Upstream 100 bases:

>100_bases
GATATCATGGCGGGCTGGTCAGCTTGGCGGTACCTTTTGATACTCGACATAACGGGGGTTTTCTGGCTAACTCATGGGAA
ATTGCATAAGGAGCCAAGTT

Downstream 100 bases:

>100_bases
AGCAATCAGTAGATAAAAGAAAGCCCGGCAAAGTCCGGGTTTTTTATTGGGTCAGGGCAAGGTGCCAGACACGTAAAAAA
GAAGGGTGAGCAACGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Sel1-Like Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Protein Kinase; Sel1-Like Protein; Sporulation Domain Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKYWQVVTAATVLLLNMGSAQAFSLPRPDSDQAAGKLLHIEMRAVQDDADAQFLLGLMYVSGRYVDKAPELGLEWIGRAA
SQGHAKAQQTLADLRFEGQLVARNLAEAEHWYLQMSLRGERWANFRLGFIYAAGGDGVERNCGRAVEQFQLVGDEVSLGN
VAWILATCPEARYRDGNKAVTLALKLLENDANDPTNLDNLAAAYAEQGDFNRAVAVQEKAISALELKKQADIKAEEFHQR
LQHYQQGKPYREVIPLQP

Sequences:

>Translated_258_residues
MKYWQVVTAATVLLLNMGSAQAFSLPRPDSDQAAGKLLHIEMRAVQDDADAQFLLGLMYVSGRYVDKAPELGLEWIGRAA
SQGHAKAQQTLADLRFEGQLVARNLAEAEHWYLQMSLRGERWANFRLGFIYAAGGDGVERNCGRAVEQFQLVGDEVSLGN
VAWILATCPEARYRDGNKAVTLALKLLENDANDPTNLDNLAAAYAEQGDFNRAVAVQEKAISALELKKQADIKAEEFHQR
LQHYQQGKPYREVIPLQP
>Mature_258_residues
MKYWQVVTAATVLLLNMGSAQAFSLPRPDSDQAAGKLLHIEMRAVQDDADAQFLLGLMYVSGRYVDKAPELGLEWIGRAA
SQGHAKAQQTLADLRFEGQLVARNLAEAEHWYLQMSLRGERWANFRLGFIYAAGGDGVERNCGRAVEQFQLVGDEVSLGN
VAWILATCPEARYRDGNKAVTLALKLLENDANDPTNLDNLAAAYAEQGDFNRAVAVQEKAISALELKKQADIKAEEFHQR
LQHYQQGKPYREVIPLQP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081769, Length=189, Percent_Identity=30.6878306878307, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28672; Mature: 28672

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYWQVVTAATVLLLNMGSAQAFSLPRPDSDQAAGKLLHIEMRAVQDDADAQFLLGLMYV
CCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
SGRYVDKAPELGLEWIGRAASQGHAKAQQTLADLRFEGQLVARNLAEAEHWYLQMSLRGE
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEECCC
RWANFRLGFIYAAGGDGVERNCGRAVEQFQLVGDEVSLGNVAWILATCPEARYRDGNKAV
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCHHH
TLALKLLENDANDPTNLDNLAAAYAEQGDFNRAVAVQEKAISALELKKQADIKAEEFHQR
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LQHYQQGKPYREVIPLQP
HHHHHCCCCHHHCCCCCC
>Mature Secondary Structure
MKYWQVVTAATVLLLNMGSAQAFSLPRPDSDQAAGKLLHIEMRAVQDDADAQFLLGLMYV
CCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCEEEEEEEEECCCCCHHHHHHHHHHH
SGRYVDKAPELGLEWIGRAASQGHAKAQQTLADLRFEGQLVARNLAEAEHWYLQMSLRGE
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEECCC
RWANFRLGFIYAAGGDGVERNCGRAVEQFQLVGDEVSLGNVAWILATCPEARYRDGNKAV
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCHHH
TLALKLLENDANDPTNLDNLAAAYAEQGDFNRAVAVQEKAISALELKKQADIKAEEFHQR
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LQHYQQGKPYREVIPLQP
HHHHHCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA