Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yheV [C]

Identifier: 119776127

GI number: 119776127

Start: 3568280

End: 3568477

Strand: Reverse

Name: yheV [C]

Synonym: Sama_2995

Alternate gene names: 119776127

Gene position: 3568477-3568280 (Counterclockwise)

Preceding gene: 119776130

Following gene: 119776126

Centisome position: 82.87

GC content: 55.05

Gene sequence:

>198_bases
ATGAGTATTTCCAGAAAACGATTTGTGGCCGGTGCCAAGTGCCCCAAGTGCGGTGCGAGCGACAGCATAGTGCTGTTCAA
AGACCATGGGGTTGAAACCGTGGAATGTGTCGAGTGCGATTATCGCGAGCAGCAGGCCGAAGAAAAGGTCGCCCAGAAGG
CGTCCGGTGCCGTGATTGGGGTGTTTAAACCGGACTGA

Upstream 100 bases:

>100_bases
TAACCAAGTTCAGGCCCGGCATCCAGCGCGAAGCCGGGATTAGGGTTGCCTGCGTAAGCTGTGGCACAATAGCGGCATTC
TTTTGTTGGATTTTCCCTGT

Downstream 100 bases:

>100_bases
TATTTCGATTTTATCGATATGTTAAGCCGCTTCTTTGCGATGTTCTTTCGTATTGGCGGGCGCTATGCTGTCATCATTGC
ACTGGAGAACTCGCCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSISRKRFVAGAKCPKCGASDSIVLFKDHGVETVECVECDYREQQAEEKVAQKASGAVIGVFKPD

Sequences:

>Translated_65_residues
MSISRKRFVAGAKCPKCGASDSIVLFKDHGVETVECVECDYREQQAEEKVAQKASGAVIGVFKPD
>Mature_64_residues
SISRKRFVAGAKCPKCGASDSIVLFKDHGVETVECVECDYREQQAEEKVAQKASGAVIGVFKPD

Specific function: Unknown

COG id: COG3529

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082247, Length=63, Percent_Identity=44.4444444444444, Blast_Score=62, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7048; Mature: 6917

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISRKRFVAGAKCPKCGASDSIVLFKDHGVETVECVECDYREQQAEEKVAQKASGAVIG
CCCCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEE
VFKPD
EECCC
>Mature Secondary Structure 
SISRKRFVAGAKCPKCGASDSIVLFKDHGVETVECVECDYREQQAEEKVAQKASGAVIG
CCCCCCEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEE
VFKPD
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA