Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yjgM [H]

Identifier: 119775907

GI number: 119775907

Start: 3317499

End: 3318437

Strand: Direct

Name: yjgM [H]

Synonym: Sama_2775

Alternate gene names: 119775907

Gene position: 3317499-3318437 (Clockwise)

Preceding gene: 119775906

Following gene: 119775908

Centisome position: 77.04

GC content: 60.28

Gene sequence:

>939_bases
ATGGTCAGAAGCACCCAAGTTCAGGAATCCCAAGCCCGTGAAGTCCGCCAGCTTTCACGGCAATTGATACGTCAGCTCGG
CATGTTGGCCGGCGCCGTTGGCAAACTGCCCCTAAGCCCCGTTCAGGCACATGCCCTCATTGAACTGGGGCAGCAGAGTC
TGTCCATCAAACAGCTCGCTCAGCTACTGAATATCGACAAATCCAATGCCAGCAGGGCAGTGACCCATCTGGTGGAAAAA
AAACTGGTGGAAACCCGGGTGCACCAAAGGGACAGCCGCAGTCTGCAAGCCAGTTTGACCGCCAAAGGCCGCACCATGCT
CGAGCGTCTCGACGAGCAGCAGGACAACTACTTCCTGCAGGTATTGGCCCAGCTGACCGACGAAGAAGCGGGGCAAATTG
CCCTGGCACTGGGACGTTTTCAGCGGGCCATAGTGCAGGCCAAGGCACAGGACGGCATTGAAATCCGCCCACTTACCCCC
GACGACGATGCCGCCATTGCGGCGGTGATCCGCGAAGTGTCAGCGGAATACGGACTGACGCCGGACAAGGGCTACGGCGT
CGCCGACAAGACCCTCGACTGCCTGAGCGAGGTGTACAGTGTGCCCGGCGCTGCCTACTGGGTGATTTGTCAGGATGGCC
AGGTGCTGGGGGGCGGCGGCATTGCCCCACTCGCCAGTGAACCCGGGGTGTGCGAGCTGCAAAAAATGTACTTTTTGCCG
GTGATTCGTGGCAAAGGCCTTGCCAGACGGCTTGCCAACCACAGCCTCGCCTTCGCCCGCCAGGAAGGCTACAGGGAGTG
CTACCTGGAGACCACGGCTGTGCTCCACGAAGCCGTAAAGCTCTACGAATCACTGGGCTTTGAACACCTGACCGCCCCCA
TGGGCAACACCGGCCACGACGCCTGCGAAATCCCCATGCTTAAGCGCCTCTCCCTCTGA

Upstream 100 bases:

>100_bases
CTGCTGCACCCCGAGCTGTATCGATAATGGTACCCGCCCCCTTGCCTAAGGTTAAAAAACTGTTAGATTGGTTGTAATTC
GCAACCAACCAAACCGCATC

Downstream 100 bases:

>100_bases
TGCAATTTTGTGCAAGCGATAAGGCAAGGCCCTGTGCTGCCTTGCTTTATCAGCCAGACTTGATAGCTTCAAACTCATAA
CGCCTATTATGCTGAGGATG

Product: putative acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MVRSTQVQESQAREVRQLSRQLIRQLGMLAGAVGKLPLSPVQAHALIELGQQSLSIKQLAQLLNIDKSNASRAVTHLVEK
KLVETRVHQRDSRSLQASLTAKGRTMLERLDEQQDNYFLQVLAQLTDEEAGQIALALGRFQRAIVQAKAQDGIEIRPLTP
DDDAAIAAVIREVSAEYGLTPDKGYGVADKTLDCLSEVYSVPGAAYWVICQDGQVLGGGGIAPLASEPGVCELQKMYFLP
VIRGKGLARRLANHSLAFARQEGYRECYLETTAVLHEAVKLYESLGFEHLTAPMGNTGHDACEIPMLKRLSL

Sequences:

>Translated_312_residues
MVRSTQVQESQAREVRQLSRQLIRQLGMLAGAVGKLPLSPVQAHALIELGQQSLSIKQLAQLLNIDKSNASRAVTHLVEK
KLVETRVHQRDSRSLQASLTAKGRTMLERLDEQQDNYFLQVLAQLTDEEAGQIALALGRFQRAIVQAKAQDGIEIRPLTP
DDDAAIAAVIREVSAEYGLTPDKGYGVADKTLDCLSEVYSVPGAAYWVICQDGQVLGGGGIAPLASEPGVCELQKMYFLP
VIRGKGLARRLANHSLAFARQEGYRECYLETTAVLHEAVKLYESLGFEHLTAPMGNTGHDACEIPMLKRLSL
>Mature_312_residues
MVRSTQVQESQAREVRQLSRQLIRQLGMLAGAVGKLPLSPVQAHALIELGQQSLSIKQLAQLLNIDKSNASRAVTHLVEK
KLVETRVHQRDSRSLQASLTAKGRTMLERLDEQQDNYFLQVLAQLTDEEAGQIALALGRFQRAIVQAKAQDGIEIRPLTP
DDDAAIAAVIREVSAEYGLTPDKGYGVADKTLDCLSEVYSVPGAAYWVICQDGQVLGGGGIAPLASEPGVCELQKMYFLP
VIRGKGLARRLANHSLAFARQEGYRECYLETTAVLHEAVKLYESLGFEHLTAPMGNTGHDACEIPMLKRLSL

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI48995002, Length=157, Percent_Identity=62.4203821656051, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.-

Molecular weight: Translated: 34169; Mature: 34169

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRSTQVQESQAREVRQLSRQLIRQLGMLAGAVGKLPLSPVQAHALIELGQQSLSIKQLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
QLLNIDKSNASRAVTHLVEKKLVETRVHQRDSRSLQASLTAKGRTMLERLDEQQDNYFLQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQLTDEEAGQIALALGRFQRAIVQAKAQDGIEIRPLTPDDDAAIAAVIREVSAEYGLT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC
PDKGYGVADKTLDCLSEVYSVPGAAYWVICQDGQVLGGGGIAPLASEPGVCELQKMYFLP
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHH
VIRGKGLARRLANHSLAFARQEGYRECYLETTAVLHEAVKLYESLGFEHLTAPMGNTGHD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
ACEIPMLKRLSL
CHHCCHHHHCCC
>Mature Secondary Structure
MVRSTQVQESQAREVRQLSRQLIRQLGMLAGAVGKLPLSPVQAHALIELGQQSLSIKQLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHH
QLLNIDKSNASRAVTHLVEKKLVETRVHQRDSRSLQASLTAKGRTMLERLDEQQDNYFLQ
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQLTDEEAGQIALALGRFQRAIVQAKAQDGIEIRPLTPDDDAAIAAVIREVSAEYGLT
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC
PDKGYGVADKTLDCLSEVYSVPGAAYWVICQDGQVLGGGGIAPLASEPGVCELQKMYFLP
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHHHH
VIRGKGLARRLANHSLAFARQEGYRECYLETTAVLHEAVKLYESLGFEHLTAPMGNTGHD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCC
ACEIPMLKRLSL
CHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8253666; 11677609 [H]