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The map label for this gene is 119775877

Identifier: 119775877

GI number: 119775877

Start: 3282978

End: 3283616

Strand: Direct

Name: 119775877

Synonym: Sama_2745

Alternate gene names: NA

Gene position: 3282978-3283616 (Clockwise)

Preceding gene: 119775876

Following gene: 119775878

Centisome position: 76.24

GC content: 57.12

Gene sequence:

>639_bases
ATGAATTCAATGGACGCCACCGCCGCTCACCACACCTCCCCAAACGCCACTCTCGTTTACGATATTCGCCACAGCCGCTA
CCTCAATATCACCGGCCGCTGCACCCTCAGATGCGGCTTTTGCCCCAAACAGCAGGGCAGCCGCCAAATACATCAATATC
AGCTGGCATTGGACAAGCAGCCCGGTGTCGATGACTTGTTGCCCTTGCTTGGGGATGTGGACACCTTTGATGAATATGTG
TTTTGTGGCTATGGCGAGCCTACGCTGAACCTGCCTACCCTGCTCGGGGTTGCCCGCGCCATCAAGTCGCAGGGCGGCCG
CATCAGGGTCAATACCGATGGCTTGGGAAACCTGTTTCATAAACGCAATATACTGCCGGAACTGGCCGACTGCGTGGATG
CGCTCTCAGTATCCCTCAATGCCCAGGATGAGTTCACCTACCTGAAACACTGTCAACCGAGACTCAAAGGTTCCTGGCAG
GCGGTGAATGACTTTATCCGCATGGCACCGGCTTACATCAAACGCGTCGAGGTTTCCGCCATCGATGGCCTGCCCGGAGT
CGATATCCCGGCCTGCCGCGCGCTGGTGGAAGCGGCGGGCTGCACCTTCAAGCATCGCAAGCTGGATATCATGGGATAG

Upstream 100 bases:

>100_bases
AGCACAAGCTCTCCCTTTTTGATCCCGGGAACATTTTGAATAAACCGCCTCTGCTAGACTGCCCCCAAGTTGCCCCCATG
CCCCAGGCAGTCACAACACC

Downstream 100 bases:

>100_bases
GTTTGTCCCGTCAAACTGAGGGAGCAGGCCTGTACCGACGGGGGAATCGTGTTAACATGATGCCCACTTTTAGCCCACAT
TTACCGCTCGCATGCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Hydrolase TatD Family; TatD Family Hydrolase; Mg-Dependent DNAse; Metallo Cofactor Biosynthesis Protein; Radical SAM-Superfamily Protein; Deoxyribonuclease TatD Family; TatD Family Deoxyribonuclease; Radical SAM Superfamily Protein; Radical SAM Family Protein; Radical SAM; TatD-Related DeoxyribonucleaseRadical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNSMDATAAHHTSPNATLVYDIRHSRYLNITGRCTLRCGFCPKQQGSRQIHQYQLALDKQPGVDDLLPLLGDVDTFDEYV
FCGYGEPTLNLPTLLGVARAIKSQGGRIRVNTDGLGNLFHKRNILPELADCVDALSVSLNAQDEFTYLKHCQPRLKGSWQ
AVNDFIRMAPAYIKRVEVSAIDGLPGVDIPACRALVEAAGCTFKHRKLDIMG

Sequences:

>Translated_212_residues
MNSMDATAAHHTSPNATLVYDIRHSRYLNITGRCTLRCGFCPKQQGSRQIHQYQLALDKQPGVDDLLPLLGDVDTFDEYV
FCGYGEPTLNLPTLLGVARAIKSQGGRIRVNTDGLGNLFHKRNILPELADCVDALSVSLNAQDEFTYLKHCQPRLKGSWQ
AVNDFIRMAPAYIKRVEVSAIDGLPGVDIPACRALVEAAGCTFKHRKLDIMG
>Mature_212_residues
MNSMDATAAHHTSPNATLVYDIRHSRYLNITGRCTLRCGFCPKQQGSRQIHQYQLALDKQPGVDDLLPLLGDVDTFDEYV
FCGYGEPTLNLPTLLGVARAIKSQGGRIRVNTDGLGNLFHKRNILPELADCVDALSVSLNAQDEFTYLKHCQPRLKGSWQ
AVNDFIRMAPAYIKRVEVSAIDGLPGVDIPACRALVEAAGCTFKHRKLDIMG

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23414; Mature: 23414

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMDATAAHHTSPNATLVYDIRHSRYLNITGRCTLRCGFCPKQQGSRQIHQYQLALDKQ
CCCCCCCHHCCCCCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCC
PGVDDLLPLLGDVDTFDEYVFCGYGEPTLNLPTLLGVARAIKSQGGRIRVNTDGLGNLFH
CCHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
KRNILPELADCVDALSVSLNAQDEFTYLKHCQPRLKGSWQAVNDFIRMAPAYIKRVEVSA
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IDGLPGVDIPACRALVEAAGCTFKHRKLDIMG
CCCCCCCCHHHHHHHHHHHCCCEECCEEECCC
>Mature Secondary Structure
MNSMDATAAHHTSPNATLVYDIRHSRYLNITGRCTLRCGFCPKQQGSRQIHQYQLALDKQ
CCCCCCCHHCCCCCCCEEEEEECCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCC
PGVDDLLPLLGDVDTFDEYVFCGYGEPTLNLPTLLGVARAIKSQGGRIRVNTDGLGNLFH
CCHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
KRNILPELADCVDALSVSLNAQDEFTYLKHCQPRLKGSWQAVNDFIRMAPAYIKRVEVSA
HHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IDGLPGVDIPACRALVEAAGCTFKHRKLDIMG
CCCCCCCCHHHHHHHHHHHCCCEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA