Click here to switch to the map view.

The map label for this gene is 119775850

Identifier: 119775850

GI number: 119775850

Start: 3250949

End: 3251749

Strand: Direct

Name: 119775850

Synonym: Sama_2718

Alternate gene names: NA

Gene position: 3250949-3251749 (Clockwise)

Preceding gene: 119775849

Following gene: 119775857

Centisome position: 75.5

GC content: 34.83

Gene sequence:

>801_bases
ATGATCAAAAAACAGCGCGGAGCAATCGAAGCGGAAGATTTATTAGAAGATTTGGGTATAGATTCACTACCAGTCGATCC
CTTTGAAATAGCTAGTCTAGTTGACAATCCATCCTTTCGAGTAGTTTTTAATTTAGTTCCATATGATGCAAAGAGCATTC
TTGGAAAAGCGATAGGAAATGACTCTGGCGCTGTCGTAGATATCAATTCCAACATTCCGGATGAAGGAAGATTGAATTTT
ACTGCTGCACATGAATTGGGGCATGTTTGTATGCATATTATGCCTGGAAGTAAAACTTCTTTTGAATGCGGCAAGCAGCA
ACTTCAATCTTCCCATGATGACCCCTTTGAAAAAGAGGCTAATGAATTTGCATCAGCATTGCTGATGCCTGAAAAACTAA
TTAATGAGCTAACTGATAAAAATATTAACTGGAAAAACATAAAACATATCAAGGATATATGCAAAACTTCTCTAGAATCG
ACTTTCAGAAGATTATCAACAATTTACAGTGAGCCATGTGCATTAATTATCCACAAAAATGGCAAGTTCACTAGGTTTGT
AACTTCGCCATACTTTGAAGTTTATATAGAGAGAAATAATTTATCAGACGAGCAGTTAAAAAAATGTGCTAATGGATTAA
ATAATGAATTTTTTAGCAGTTTTGAAGAGTCTTCCCCTTCCGGCTGGGTAAAACCAAAGGTTAGATCCTATACATTACAA
AAAATTTATACGAGTTCAGTATCATTATCCGATGGCTTTGTATATACCCTTATAAAATATAATGACAAGTGCTTAAATTA
G

Upstream 100 bases:

>100_bases
TGGAGTTTTATAGAAAATTTGGCGTGCTTGAAGAACTCAGTGAAGATGACCAAAAGCGGCTAATAGATATGGCTAATAGG
TTGAAGGAAATCACAAATAA

Downstream 100 bases:

>100_bases
TGAATTCTTCATGAATATTAAATAGGAATATCCTCCTAAATTACAATTACTACCCAGAACACATATTAAAATTCATTTAA
GAATAATAATCCATCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIKKQRGAIEAEDLLEDLGIDSLPVDPFEIASLVDNPSFRVVFNLVPYDAKSILGKAIGNDSGAVVDINSNIPDEGRLNF
TAAHELGHVCMHIMPGSKTSFECGKQQLQSSHDDPFEKEANEFASALLMPEKLINELTDKNINWKNIKHIKDICKTSLES
TFRRLSTIYSEPCALIIHKNGKFTRFVTSPYFEVYIERNNLSDEQLKKCANGLNNEFFSSFEESSPSGWVKPKVRSYTLQ
KIYTSSVSLSDGFVYTLIKYNDKCLN

Sequences:

>Translated_266_residues
MIKKQRGAIEAEDLLEDLGIDSLPVDPFEIASLVDNPSFRVVFNLVPYDAKSILGKAIGNDSGAVVDINSNIPDEGRLNF
TAAHELGHVCMHIMPGSKTSFECGKQQLQSSHDDPFEKEANEFASALLMPEKLINELTDKNINWKNIKHIKDICKTSLES
TFRRLSTIYSEPCALIIHKNGKFTRFVTSPYFEVYIERNNLSDEQLKKCANGLNNEFFSSFEESSPSGWVKPKVRSYTLQ
KIYTSSVSLSDGFVYTLIKYNDKCLN
>Mature_266_residues
MIKKQRGAIEAEDLLEDLGIDSLPVDPFEIASLVDNPSFRVVFNLVPYDAKSILGKAIGNDSGAVVDINSNIPDEGRLNF
TAAHELGHVCMHIMPGSKTSFECGKQQLQSSHDDPFEKEANEFASALLMPEKLINELTDKNINWKNIKHIKDICKTSLES
TFRRLSTIYSEPCALIIHKNGKFTRFVTSPYFEVYIERNNLSDEQLKKCANGLNNEFFSSFEESSPSGWVKPKVRSYTLQ
KIYTSSVSLSDGFVYTLIKYNDKCLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29961; Mature: 29961

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKQRGAIEAEDLLEDLGIDSLPVDPFEIASLVDNPSFRVVFNLVPYDAKSILGKAIGN
CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCC
DSGAVVDINSNIPDEGRLNFTAAHELGHVCMHIMPGSKTSFECGKQQLQSSHDDPFEKEA
CCCEEEEECCCCCCCCCEEEHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHH
NEFASALLMPEKLINELTDKNINWKNIKHIKDICKTSLESTFRRLSTIYSEPCALIIHKN
HHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GKFTRFVTSPYFEVYIERNNLSDEQLKKCANGLNNEFFSSFEESSPSGWVKPKVRSYTLQ
CCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHH
KIYTSSVSLSDGFVYTLIKYNDKCLN
HHHHCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MIKKQRGAIEAEDLLEDLGIDSLPVDPFEIASLVDNPSFRVVFNLVPYDAKSILGKAIGN
CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCC
DSGAVVDINSNIPDEGRLNFTAAHELGHVCMHIMPGSKTSFECGKQQLQSSHDDPFEKEA
CCCEEEEECCCCCCCCCEEEHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHHH
NEFASALLMPEKLINELTDKNINWKNIKHIKDICKTSLESTFRRLSTIYSEPCALIIHKN
HHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
GKFTRFVTSPYFEVYIERNNLSDEQLKKCANGLNNEFFSSFEESSPSGWVKPKVRSYTLQ
CCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHH
KIYTSSVSLSDGFVYTLIKYNDKCLN
HHHHCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA