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The map label for this gene is 119775836

Identifier: 119775836

GI number: 119775836

Start: 3235328

End: 3236488

Strand: Direct

Name: 119775836

Synonym: Sama_2704

Alternate gene names: NA

Gene position: 3235328-3236488 (Clockwise)

Preceding gene: 119775833

Following gene: 119775839

Centisome position: 75.13

GC content: 55.56

Gene sequence:

>1161_bases
ATGGATGAGCAGTATCAATATCAGCAAAGGGACGTGCCCCCACGCCCCCACAAAGCCTTCCGACTCGGGGAAGGGAAAAT
CAGCGGCTTTGCCAGCGTATGTTTAGGGGCGCTCAGCCTATTAGCCGTGCTGGCCTATCTTTATCCCTCTTATCTCACCA
CCACAGAACTCAGGGCAGTTTACGACGCCAAAGAACTTCAGCAAGTGCTGAAATACGGCATGTATTTTTCGCTCTTTTTT
GGATTGCTGACTTTTGTGCTGGGTGGCTATCGCCGGCTGGGATTAACCGGTATCGGCCTCACAAGTACTGCGTTTTTGCT
GGGTGGCTGGCAAATTCCTGTGGGCCCCGTTGCGCCCAAAGCGCTCTCACTCGGTGTGGATTGGCTCATCCTGGCGTTTT
TGGGGTCGGTGTTTATTTTTATGACCCTGGAGAAACTGCTGCCAAGGTATAAAGATCAGGTGATTTTGCGCCCCGGATGG
GGGCTGGATCTCTGGTATTTCGTATTCAACCATTTGGCGATTTCCGCCATCCTGCTGTACGCGAACTACCATGTTAGCCA
CTTCCACTGGGCGGTCAGCGACGAGGTACAGGCCTGGGTTCAGGCATTGCCACTGTGGGTGCAGGTGGTGGCCATTATCC
TCGCGGCCGATTTTGTCCTCTACTGGGAACATCGTCTGTTTCACGAAGTCGGCTTTTTGTGGCCCATTCATGCGGTGCAT
CACTCGGTGGAAGATTTAGACTGGCTCGCGGGCTCCCGAGGTCACTTTATTCAGATGTTCTCCGAACGTGCCATGGTGAT
GGTGCCCCTTTATCTCCTTGGGCCTGACAAGGCCGCGCTCGACATCTACGTGGCCTTTGCGGCGCTGCAGGCGGTGCTTA
TCCATTGCAACACCCGACTGCATTTTGGCCCCATCAAGTACCTGTTGGTGACGCCCTGGTTCCACCACTGGCATCACAGC
TCGGAAAAACCGGCCATAGATACCAACTATGGCGCGCACACTCCCATTTACGACTGGTTGTTCGGCACCCTGCATGTGCC
ATCACAGCACTGGCCCGCCCACTATGGCACCACCAAGCCCCTGCCCCGGACCTTCATGGGACAGCTCAGCTATCCCTTCG
CCTGTTGGCTGGCCAGGCGCAAAACCAAGGGCGCTGACTGA

Upstream 100 bases:

>100_bases
AAGGCTGTGACATAATCGCCGCAATTGGATTTGGCCGCCAACGGGGCAACAACCGGCCCCCGGTCGGCGTCGTGCGGCCC
CGAAACAAGGATATTCAGCC

Downstream 100 bases:

>100_bases
GCCAAAGGATTAACCTTTCCCTCGCACAAACAAAACGCCCGGCAAAGCTGCCGGGCGTTTTAAGGCACGCGTCAATCAAC
CGCGTCTGCGACTTCTACGG

Product: sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; TRAP Dicarboxylate Transporter; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase-Like; Sterol Desaturase -Like Protein; Transmembrane Fatty Acid Synthesis Protein; Sterol Desaturase Protein; Sterol Desaturate; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MDEQYQYQQRDVPPRPHKAFRLGEGKISGFASVCLGALSLLAVLAYLYPSYLTTTELRAVYDAKELQQVLKYGMYFSLFF
GLLTFVLGGYRRLGLTGIGLTSTAFLLGGWQIPVGPVAPKALSLGVDWLILAFLGSVFIFMTLEKLLPRYKDQVILRPGW
GLDLWYFVFNHLAISAILLYANYHVSHFHWAVSDEVQAWVQALPLWVQVVAIILAADFVLYWEHRLFHEVGFLWPIHAVH
HSVEDLDWLAGSRGHFIQMFSERAMVMVPLYLLGPDKAALDIYVAFAALQAVLIHCNTRLHFGPIKYLLVTPWFHHWHHS
SEKPAIDTNYGAHTPIYDWLFGTLHVPSQHWPAHYGTTKPLPRTFMGQLSYPFACWLARRKTKGAD

Sequences:

>Translated_386_residues
MDEQYQYQQRDVPPRPHKAFRLGEGKISGFASVCLGALSLLAVLAYLYPSYLTTTELRAVYDAKELQQVLKYGMYFSLFF
GLLTFVLGGYRRLGLTGIGLTSTAFLLGGWQIPVGPVAPKALSLGVDWLILAFLGSVFIFMTLEKLLPRYKDQVILRPGW
GLDLWYFVFNHLAISAILLYANYHVSHFHWAVSDEVQAWVQALPLWVQVVAIILAADFVLYWEHRLFHEVGFLWPIHAVH
HSVEDLDWLAGSRGHFIQMFSERAMVMVPLYLLGPDKAALDIYVAFAALQAVLIHCNTRLHFGPIKYLLVTPWFHHWHHS
SEKPAIDTNYGAHTPIYDWLFGTLHVPSQHWPAHYGTTKPLPRTFMGQLSYPFACWLARRKTKGAD
>Mature_386_residues
MDEQYQYQQRDVPPRPHKAFRLGEGKISGFASVCLGALSLLAVLAYLYPSYLTTTELRAVYDAKELQQVLKYGMYFSLFF
GLLTFVLGGYRRLGLTGIGLTSTAFLLGGWQIPVGPVAPKALSLGVDWLILAFLGSVFIFMTLEKLLPRYKDQVILRPGW
GLDLWYFVFNHLAISAILLYANYHVSHFHWAVSDEVQAWVQALPLWVQVVAIILAADFVLYWEHRLFHEVGFLWPIHAVH
HSVEDLDWLAGSRGHFIQMFSERAMVMVPLYLLGPDKAALDIYVAFAALQAVLIHCNTRLHFGPIKYLLVTPWFHHWHHS
SEKPAIDTNYGAHTPIYDWLFGTLHVPSQHWPAHYGTTKPLPRTFMGQLSYPFACWLARRKTKGAD

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=213, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44056; Mature: 44056

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCHHHHHHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA