Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is pssA [H]

Identifier: 119775732

GI number: 119775732

Start: 3112729

End: 3113580

Strand: Reverse

Name: pssA [H]

Synonym: Sama_2600

Alternate gene names: 119775732

Gene position: 3113580-3112729 (Counterclockwise)

Preceding gene: 119775734

Following gene: 119775731

Centisome position: 72.31

GC content: 50.35

Gene sequence:

>852_bases
ATGCAAAATATTGACAAGCCAACAGTAAAAAATCGCGGTATCTATTTGCTGCCTAACCTTTTTACCACTGCCGGATTGTT
TTCTGGCTTCTACGCCGTAATCGCGTCCATGAATGGCCAATTTGAATCTGCAGCCATTGCAGTGTTTGTCGCCATGCTGT
GCGATGGGCTCGATGGCAGAGTGGCAAGGTTAACCAATACCCAGAGTGAATTTGGCGCCGAGTACGACAGCATGGCCGAT
ATGGTGTCATTCGGAATGGCACCGGCACTGATAGCCTATAACTGGGCGCTGTCAGACCTTGGCAAAATTGGATGGCTCGC
TGCCTTTATATACTGTGCCGGGGCGGCGTTACGTCTTGCCAGGTTTAATACGCAGGTTGGTGTCGCAGACAAACGATGGT
TTCAGGGGCTGGCAAGCCCGGCTGCGGCGGCCGTGATCGCTGGGACTGTGTGGCTTGGAAACCAATATCGCATTGAAGCA
GACTCAGTGAGCTATCTGTTCGCCGTGGTTACCATCTGCACAGGGCTACTGATGGTCAGTAACTTCCGTTATCACTCCTT
TAAAGAAGTCGACTGGCGTGGCAAGGTCAACTTTATCGTTATCCTGTTGGTGGTCGGGGTCTTTGTAGTGATCTCGGTAG
AACCTGCATTAATCCTGTGTCTGGGTTTTTATCTTTATGCGTTGTCTGGCCCAGTGATTACCGTCCGTTCGGTACGTAAG
CTTAAGGTTTCTCATGTGGTCGGCGACGATGAAGACGAGCATGAGCAGGGATACTCGCAGGACTCTCCGGATAACCAAGT
AAAAGCGCAAGCTGACAAAGGGGAATTCGATAAATCAGCGAAAGACGATTAA

Upstream 100 bases:

>100_bases
GGTACCTGAATTCCATAAGGCCCTGCCTCCATAAAGCACTCGCCTGTGATTGGCGAAAATGTGGTATCTTGATTCGGTGT
AACTTAATGATAACCAGTGT

Downstream 100 bases:

>100_bases
CCTCGTACTGCTAAATATCGCTATGCCCGATAGCTTTCACATTAAAAACGCCGCCCAGCGGCGTTTTTAATTTGGAAAAA
TTGCCGAAACTTGCCCATAC

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQNIDKPTVKNRGIYLLPNLFTTAGLFSGFYAVIASMNGQFESAAIAVFVAMLCDGLDGRVARLTNTQSEFGAEYDSMAD
MVSFGMAPALIAYNWALSDLGKIGWLAAFIYCAGAALRLARFNTQVGVADKRWFQGLASPAAAAVIAGTVWLGNQYRIEA
DSVSYLFAVVTICTGLLMVSNFRYHSFKEVDWRGKVNFIVILLVVGVFVVISVEPALILCLGFYLYALSGPVITVRSVRK
LKVSHVVGDDEDEHEQGYSQDSPDNQVKAQADKGEFDKSAKDD

Sequences:

>Translated_283_residues
MQNIDKPTVKNRGIYLLPNLFTTAGLFSGFYAVIASMNGQFESAAIAVFVAMLCDGLDGRVARLTNTQSEFGAEYDSMAD
MVSFGMAPALIAYNWALSDLGKIGWLAAFIYCAGAALRLARFNTQVGVADKRWFQGLASPAAAAVIAGTVWLGNQYRIEA
DSVSYLFAVVTICTGLLMVSNFRYHSFKEVDWRGKVNFIVILLVVGVFVVISVEPALILCLGFYLYALSGPVITVRSVRK
LKVSHVVGDDEDEHEQGYSQDSPDNQVKAQADKGEFDKSAKDD
>Mature_283_residues
MQNIDKPTVKNRGIYLLPNLFTTAGLFSGFYAVIASMNGQFESAAIAVFVAMLCDGLDGRVARLTNTQSEFGAEYDSMAD
MVSFGMAPALIAYNWALSDLGKIGWLAAFIYCAGAALRLARFNTQVGVADKRWFQGLASPAAAAVIAGTVWLGNQYRIEA
DSVSYLFAVVTICTGLLMVSNFRYHSFKEVDWRGKVNFIVILLVVGVFVVISVEPALILCLGFYLYALSGPVITVRSVRK
LKVSHVVGDDEDEHEQGYSQDSPDNQVKAQADKGEFDKSAKDD

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=139, Percent_Identity=37.410071942446, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 30832; Mature: 30832

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIDKPTVKNRGIYLLPNLFTTAGLFSGFYAVIASMNGQFESAAIAVFVAMLCDGLDGR
CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
VARLTNTQSEFGAEYDSMADMVSFGMAPALIAYNWALSDLGKIGWLAAFIYCAGAALRLA
EEHHCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNTQVGVADKRWFQGLASPAAAAVIAGTVWLGNQYRIEADSVSYLFAVVTICTGLLMVS
HHCCCCCCCHHHHHHHHCCHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHH
NFRYHSFKEVDWRGKVNFIVILLVVGVFVVISVEPALILCLGFYLYALSGPVITVRSVRK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEHHHHH
LKVSHVVGDDEDEHEQGYSQDSPDNQVKAQADKGEFDKSAKDD
HHHHHHCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MQNIDKPTVKNRGIYLLPNLFTTAGLFSGFYAVIASMNGQFESAAIAVFVAMLCDGLDGR
CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
VARLTNTQSEFGAEYDSMADMVSFGMAPALIAYNWALSDLGKIGWLAAFIYCAGAALRLA
EEHHCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNTQVGVADKRWFQGLASPAAAAVIAGTVWLGNQYRIEADSVSYLFAVVTICTGLLMVS
HHCCCCCCCHHHHHHHHCCHHHHHHHHHHEEECCEEEECHHHHHHHHHHHHHHHHHHHHH
NFRYHSFKEVDWRGKVNFIVILLVVGVFVVISVEPALILCLGFYLYALSGPVITVRSVRK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEHHHHH
LKVSHVVGDDEDEHEQGYSQDSPDNQVKAQADKGEFDKSAKDD
HHHHHHCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]