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The map label for this gene is yiaO [C]

Identifier: 119775674

GI number: 119775674

Start: 3051884

End: 3052975

Strand: Reverse

Name: yiaO [C]

Synonym: Sama_2542

Alternate gene names: 119775674

Gene position: 3052975-3051884 (Counterclockwise)

Preceding gene: 119775675

Following gene: 119775673

Centisome position: 70.9

GC content: 52.66

Gene sequence:

>1092_bases
ATGCAAACAAGATTAAGGATTTGCATGTTGATGGCCGCGAGTTTGTTGGCCGGCTGCAATGATGATAAACAAGCTGCTGA
GGCCACACCGATAGACAGTGCCAAACAGATAGAATGGAAGCTTGCCACCTCCTGGCCCAAGAACTTTCCCGGCCTTGGCA
CAGCGCCTGAACACTTTGCCGTGATGGTGGATGAAATGTCGGCCGGACGTCTCAAAATCAAGGTGTATGGGGCAGGGGAG
TTGATGCCGGCACTGGAAGTGTTTGATGCAGTCAGTCAGGGCTCGGTGCAGATGGCCCACAGCGCGTCTTATTATTGGAA
AGGCAAGGCGCCGGCGGCGCAGTTTTTTACCTCCATACCCTTCGGGCTCAATGCCCAGGAGATGAATGGCTGGCTGACCT
ATGGCGGAGGACAGGAGTTGTGGGAAGAGGTGTATGCTCCTTTTGGTATTCTGCCTTTGCCGGGGGGCAACAGCGGCGTA
CAGATGGGCGGATGGTTTAATAAAGAAATCAACACTATCGATGACCTTAAAGGGCTTAAAATGCGTCTGCCAGGCCTGGG
CGGCGAAGTGTTGAAGCGATTGGAAGGTGTGCCCGTTACCCTCCCGGGGCGTGAACTCTATACGGCCATGCAAACAGGGG
CCATTGATGCTACCGAATGGGTGGGACCTTACAACGATTTAGCCTTTGGCCTGCATAAGGTCGCCAAGTATTACTACTAT
CCCGGCTGGCATGAACCGGGTACCACACTGGAATTCATGATTAACAAAGCCGCCTTCGAGAAATTGCCCAAGGATTTACA
GGCAATTGTGAAGATAGCGGCAAAGGCGACCAATCAGGATATGCTGGATGAATACACCGCCCGCAACGTGGGGGCGCTGG
ATGCGTTGGTAAATGAACATGGGGTGGTACTCAAACAGTTTCCCGAAGAAGTGATGGCGCAGCTCAGAAGCGTATCGGCT
GAGGTAATTTCTGAACAGTCGAGCCAGGATCCCATGATGAAAAAAGTGAACGAAGCCTACCGTGAATACGAGGCTGGCGT
CAGGAAGTACCATCTGATTTCTGAGGACGCCTACACCCGTTTACGTGAATGA

Upstream 100 bases:

>100_bases
GATGTTGATATTACTTGGGATTTGGCCGGCACTTGCCACCTGGCTGCCGTCGGTTTTGTATGGCTGATGATGTCCAGGCC
TGTTTAAAGGAGTAAGGAAA

Downstream 100 bases:

>100_bases
GTTTTGGTGGCCCTGCTTTGATGCTATGCTTGCGTCACTTTGCACCACCCAATTGTGCCCCAACAGAAGGGGCTGGAGAG
CAACATGCCATTATTGGACA

Product: TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit; Trap Dicarboxylate Transporter

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MQTRLRICMLMAASLLAGCNDDKQAAEATPIDSAKQIEWKLATSWPKNFPGLGTAPEHFAVMVDEMSAGRLKIKVYGAGE
LMPALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIPFGLNAQEMNGWLTYGGGQELWEEVYAPFGILPLPGGNSGV
QMGGWFNKEINTIDDLKGLKMRLPGLGGEVLKRLEGVPVTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYY
PGWHEPGTTLEFMINKAAFEKLPKDLQAIVKIAAKATNQDMLDEYTARNVGALDALVNEHGVVLKQFPEEVMAQLRSVSA
EVISEQSSQDPMMKKVNEAYREYEAGVRKYHLISEDAYTRLRE

Sequences:

>Translated_363_residues
MQTRLRICMLMAASLLAGCNDDKQAAEATPIDSAKQIEWKLATSWPKNFPGLGTAPEHFAVMVDEMSAGRLKIKVYGAGE
LMPALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIPFGLNAQEMNGWLTYGGGQELWEEVYAPFGILPLPGGNSGV
QMGGWFNKEINTIDDLKGLKMRLPGLGGEVLKRLEGVPVTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYY
PGWHEPGTTLEFMINKAAFEKLPKDLQAIVKIAAKATNQDMLDEYTARNVGALDALVNEHGVVLKQFPEEVMAQLRSVSA
EVISEQSSQDPMMKKVNEAYREYEAGVRKYHLISEDAYTRLRE
>Mature_363_residues
MQTRLRICMLMAASLLAGCNDDKQAAEATPIDSAKQIEWKLATSWPKNFPGLGTAPEHFAVMVDEMSAGRLKIKVYGAGE
LMPALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIPFGLNAQEMNGWLTYGGGQELWEEVYAPFGILPLPGGNSGV
QMGGWFNKEINTIDDLKGLKMRLPGLGGEVLKRLEGVPVTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYY
PGWHEPGTTLEFMINKAAFEKLPKDLQAIVKIAAKATNQDMLDEYTARNVGALDALVNEHGVVLKQFPEEVMAQLRSVSA
EVISEQSSQDPMMKKVNEAYREYEAGVRKYHLISEDAYTRLRE

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40133; Mature: 40133

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRLRICMLMAASLLAGCNDDKQAAEATPIDSAKQIEWKLATSWPKNFPGLGTAPEHFA
CCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHE
VMVDEMSAGRLKIKVYGAGELMPALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIP
EEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEHHCCCEEECCCCCHHHHHHHCC
FGLNAQEMNGWLTYGGGQELWEEVYAPFGILPLPGGNSGVQMGGWFNKEINTIDDLKGLK
CCCCHHHCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCCHHHHCCCE
MRLPGLGGEVLKRLEGVPVTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYY
EECCCCCHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCC
PGWHEPGTTLEFMINKAAFEKLPKDLQAIVKIAAKATNQDMLDEYTARNVGALDALVNEH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHC
GVVLKQFPEEVMAQLRSVSAEVISEQSSQDPMMKKVNEAYREYEAGVRKYHLISEDAYTR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHH
LRE
HCC
>Mature Secondary Structure
MQTRLRICMLMAASLLAGCNDDKQAAEATPIDSAKQIEWKLATSWPKNFPGLGTAPEHFA
CCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHE
VMVDEMSAGRLKIKVYGAGELMPALEVFDAVSQGSVQMAHSASYYWKGKAPAAQFFTSIP
EEEECCCCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEHHCCCEEECCCCCHHHHHHHCC
FGLNAQEMNGWLTYGGGQELWEEVYAPFGILPLPGGNSGVQMGGWFNKEINTIDDLKGLK
CCCCHHHCCCEEEECCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCCHHHHCCCE
MRLPGLGGEVLKRLEGVPVTLPGRELYTAMQTGAIDATEWVGPYNDLAFGLHKVAKYYYY
EECCCCCHHHHHHHCCCCEEECCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHCC
PGWHEPGTTLEFMINKAAFEKLPKDLQAIVKIAAKATNQDMLDEYTARNVGALDALVNEH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHC
GVVLKQFPEEVMAQLRSVSAEVISEQSSQDPMMKKVNEAYREYEAGVRKYHLISEDAYTR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEECHHHHHH
LRE
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA