| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775633
Identifier: 119775633
GI number: 119775633
Start: 3003118
End: 3003318
Strand: Reverse
Name: 119775633
Synonym: Sama_2501
Alternate gene names: NA
Gene position: 3003318-3003118 (Counterclockwise)
Preceding gene: 119775634
Following gene: 119775632
Centisome position: 69.74
GC content: 53.73
Gene sequence:
>201_bases ATGAGTCTGAGTAAACTTGCCGAAGCCAAGCATCTGCTTGAGCAGCCCATGACCCTTGGTAACTTGAAACGTTTTCAAGT GCTTTGCCAGGGAGCCGATGAGGAAACCGCTGCGGTGAGGGAATTGCGCGAGCCTCTTAAGGCGCGCCTTGCCGATGATG AAGATCTCTTTTTTACCGCGCTGGAGCAGGGGCTACTCTAG
Upstream 100 bases:
>100_bases ACTGGCCGCAGGTTTTGCTTGGACCAAAGCAGTTTCTGGAGGAGCGTCGGCCCCTATTAGCGGGTCCCACTGATTGGGAT ACCCAAGAAGAGGAATCGCC
Downstream 100 bases:
>100_bases CCATTGAGTTGGGGACGTCTGCATCAGAACCTATTCAGGTGTGGGCTTGATTAATCCTACCTCGCCCCCATATCTAAGTC ATGAGTGCTGTTCACGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL
Sequences:
>Translated_66_residues MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL >Mature_65_residues SLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTALEQGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7414; Mature: 7282
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTA CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LEQGLL HHHCCC >Mature Secondary Structure SLSKLAEAKHLLEQPMTLGNLKRFQVLCQGADEETAAVRELREPLKARLADDEDLFFTA CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LEQGLL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA