Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775617

Identifier: 119775617

GI number: 119775617

Start: 2985297

End: 2987174

Strand: Direct

Name: 119775617

Synonym: Sama_2484

Alternate gene names: NA

Gene position: 2985297-2987174 (Clockwise)

Preceding gene: 119775616

Following gene: 119775623

Centisome position: 69.33

GC content: 51.6

Gene sequence:

>1878_bases
ATGCCAAATACGTATAACAAAAAAAATAAAATCTCTCTCATCGCCGCCAGTCTGTTGCTTGCGCTGGGCTCAGCCTCCAG
TTTTACCGCACAGGCCGAGACACAGGGCACAGCTCAGCAAGGCACAGCGCAGCAAGTGACCAGCGAATCTGCCAAAGCCA
ATGCCCTGTTCGAGACCCAGTTTATGGAAAACGTCATGGCAAGCCCTATCAGTCAAACCCTGATGGGCATCAAGGGCGAA
GACTATGGCAAGTGGGATGAAATCAGTGAAGCGGCAGATGCCCGCGAATTGGAGAGAGCCAAACGCCATCTGGCTGAGCT
CAGAGCTATCGATGCCAATGCCCTGGATTCTCAAACGGCACTCAGCTTGGCGTTGGCGCTGCAAAGCCTGGAAAATGAGA
TTGCCGACTACAAATGGCGACTGCACAACTACCCGGTCAATCAAATGTATGGCGTCCACTCGCTCACAGCCTCCATTCTT
ATCAACCAGCACACGGTTGATAACCTGGATGACGCCAAGGCCTATATCAGCCGTCTCAATGCCGTACCCAAGCGTTTCAG
TGAGCTTAAAGACGCTCTGGAATTGAGAGCAGCCAAAGGCATCATTGCGCCCAGGTTTGTGTTCCCCCTCGTGATTAACG
ACAGCCGTAATATCATCAAAGGCGAGCCCTTTGAAGAAGGTGAAGACAGCACCCTGTGGGCTGACTTCAAACGGAAAGTC
GACGCTCTGAATTTGGATGCCACCACCAAGGAGAACCTCTTCAGCGAAGCTAAACTGGCCCTGAACAATGCGGTAAAACC
AGCTTACGATGACCTGATTGTTTACCTGAACACTCTGGAACAAAAAGCCGATACCCGAGATGGAGTTTGGAAACTGCCAG
ATGGTAACGACTTCTACAACAATGCCCTTAAGCGCACCACCACCACCGATATGGATGCCATCGCCATCCATGAGCTCGGC
TTGAAGGAAGTGGCCCGCATTCATAACGAAATGCGCGACATCATGAAAGAAGTGGGCTTCAAAGGCAGCCTGAATGACTT
CTTTATCTTTATGCGTAACGACGAGCAGTTTTACTACCCCGATACTGACGATGGGAAAGCTGCCTATATCAACGATGCCA
AGGCATTGATTGACAATATGTCTGCCCGCCTTGATGAGGTCTTTGCCATCAAACCCAAAGCTGGCCTGATAGTAAAACCC
GTTGAATCATTCCGGGAAAAAAGTGCCGGAAAGGCATTCTACGACCAGCCAGCCCCGGATGGCAGTCGCCCGGGCACATA
CTACGCCAACCTGTACAGCATGAAGGCCATGCCCAAGTACCAGATGGAAGCACTGGCATACCATGAAGGATTACCCGGTC
ACCATATGCAAATCGCCATCGCCCAGGAGCTGGAAGGCATTCCCAAATTCCGTCGCTTTGGCAGATATACTGCCTATGTT
GAGGGTTGGGGCCTATACACAGAGTTCTTCCCTCGGGAAATGGGCCTGTACCAAGACCCTTACTCCAACTTCGGCCGCCT
GGCCATGGAGCTCTGGCGCGCCTGCCGTTTGGTGGTGGACACAGGTATTCACGCCAAGAAATGGACCCGCGAACAGGGCA
TTGCCTATTACAAAGAAAACACACCCAACGCCGAGTCAGATGCCGTCAAAATGGTTGAACGTCATATCGTGATGCCTTCG
CAGGCAACGGCCTACAAGGTGGGTATGAATCGAATTTTAGATCTGCGTGCCTATGCCCAGAAGTCTCTGGGAGACGCGTT
TGATATCCGCGAATTCCATACTCTACTGCTGAAAAATGGCCCACTACCATTGGATGTACTCGAGACCAAGGTGCAGGAAT
GGGTAAAAGACAGCAAACAGCAAGCCGCCAAGCTGTAA

Upstream 100 bases:

>100_bases
TGCCTGCCTCTGGGAACCGGGAAACATTTACTAACACTAAACTCTGAAATTTACCCATGGCTTCTTTAGGATGTTCCCAT
TAACACGAGGAAGCCAAGTC

Downstream 100 bases:

>100_bases
TGCACTGAAAAATAAAGGAACGAAAAAAAGCCACAACCTCAGGGTTGTGGCTTTTTTTCTTGGGGCTTTCCCCAATTGGC
TGCCTATACACCGCACTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MPNTYNKKNKISLIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKANALFETQFMENVMASPISQTLMGIKGE
DYGKWDEISEAADARELERAKRHLAELRAIDANALDSQTALSLALALQSLENEIADYKWRLHNYPVNQMYGVHSLTASIL
INQHTVDNLDDAKAYISRLNAVPKRFSELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKV
DALNLDATTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVWKLPDGNDFYNNALKRTTTTDMDAIAIHELG
LKEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYPDTDDGKAAYINDAKALIDNMSARLDEVFAIKPKAGLIVKP
VESFREKSAGKAFYDQPAPDGSRPGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYV
EGWGLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKENTPNAESDAVKMVERHIVMPS
QATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNGPLPLDVLETKVQEWVKDSKQQAAKL

Sequences:

>Translated_625_residues
MPNTYNKKNKISLIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKANALFETQFMENVMASPISQTLMGIKGE
DYGKWDEISEAADARELERAKRHLAELRAIDANALDSQTALSLALALQSLENEIADYKWRLHNYPVNQMYGVHSLTASIL
INQHTVDNLDDAKAYISRLNAVPKRFSELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKV
DALNLDATTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVWKLPDGNDFYNNALKRTTTTDMDAIAIHELG
LKEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYPDTDDGKAAYINDAKALIDNMSARLDEVFAIKPKAGLIVKP
VESFREKSAGKAFYDQPAPDGSRPGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYV
EGWGLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKENTPNAESDAVKMVERHIVMPS
QATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNGPLPLDVLETKVQEWVKDSKQQAAKL
>Mature_624_residues
PNTYNKKNKISLIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKANALFETQFMENVMASPISQTLMGIKGED
YGKWDEISEAADARELERAKRHLAELRAIDANALDSQTALSLALALQSLENEIADYKWRLHNYPVNQMYGVHSLTASILI
NQHTVDNLDDAKAYISRLNAVPKRFSELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKVD
ALNLDATTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVWKLPDGNDFYNNALKRTTTTDMDAIAIHELGL
KEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYPDTDDGKAAYINDAKALIDNMSARLDEVFAIKPKAGLIVKPV
ESFREKSAGKAFYDQPAPDGSRPGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYVE
GWGLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKENTPNAESDAVKMVERHIVMPSQ
ATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNGPLPLDVLETKVQEWVKDSKQQAAKL

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70448; Mature: 70316

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTYNKKNKISLIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKANALFETQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCCEECHHCCCCHHCCHHHHHHHHHHHHHHHHHHH
FMENVMASPISQTLMGIKGEDYGKWDEISEAADARELERAKRHLAELRAIDANALDSQTA
HHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSLALALQSLENEIADYKWRLHNYPVNQMYGVHSLTASILINQHTVDNLDDAKAYISRLN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVPKRFSELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKV
HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
DALNLDATTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVWKLPDGNDFYN
HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHH
NALKRTTTTDMDAIAIHELGLKEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYP
HHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECC
DTDDGKAAYINDAKALIDNMSARLDEVFAIKPKAGLIVKPVESFREKSAGKAFYDQPAPD
CCCCCCEEEECHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHCCCCCCCCCCCCC
GSRPGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYV
CCCCCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHCCCEEEEE
EGWGLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKEN
ECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECC
TPNAESDAVKMVERHIVMPSQATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNG
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PLPLDVLETKVQEWVKDSKQQAAKL
CCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PNTYNKKNKISLIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKANALFETQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCEECHHCCCCHHCCHHHHHHHHHHHHHHHHHHH
FMENVMASPISQTLMGIKGEDYGKWDEISEAADARELERAKRHLAELRAIDANALDSQTA
HHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
LSLALALQSLENEIADYKWRLHNYPVNQMYGVHSLTASILINQHTVDNLDDAKAYISRLN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHH
AVPKRFSELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKV
HHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
DALNLDATTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVWKLPDGNDFYN
HHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHH
NALKRTTTTDMDAIAIHELGLKEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYP
HHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECC
DTDDGKAAYINDAKALIDNMSARLDEVFAIKPKAGLIVKPVESFREKSAGKAFYDQPAPD
CCCCCCEEEECHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHCCCCCCCCCCCCC
GSRPGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYV
CCCCCCEEEHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHCCCEEEEE
EGWGLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKEN
ECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEECC
TPNAESDAVKMVERHIVMPSQATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNG
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PLPLDVLETKVQEWVKDSKQQAAKL
CCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA