Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is glgP [H]

Identifier: 119775585

GI number: 119775585

Start: 2952717

End: 2955191

Strand: Reverse

Name: glgP [H]

Synonym: Sama_2451

Alternate gene names: 119775585

Gene position: 2955191-2952717 (Counterclockwise)

Preceding gene: 119775586

Following gene: 119775584

Centisome position: 68.63

GC content: 58.02

Gene sequence:

>2475_bases
ATGGCGACCAAACGACTGAAAGCGGCCGGACCCGAAACGGATACCGGCAGACCCCAGCCCTGTGAACCCTGCGATGCACT
GCCGGCCTGTCTCGAGCGGCAGCTGAGATACAACCTGTGCCGGGAAGAGTCCCGCCATCAGGATTTGTTTCATGCACTGG
CCCATGGCGTTAAGGAACAGCTGCTGGACAGCTGGCGTGAAACCCGCAAACGGGATGCCGCTGGTCAGCAACGTCAGGTG
GCTTATTTGTCGCTGGAGTTCCTGATGGGTCGAACCCTGGGGAATGCGCTTTTGAGTCTGGGGATAAGCGATGATGCCCG
CAAGGCGTTGCTGCCCTACAGCGTGACCCTGGAGGATCTCGAGTCCGAGGAGCATGATGCCGGGCTGGGTAACGGTGGTC
TTGGGCGTCTTGCGGCCTGTTTTCTCGATTCCTGCGCCAGTATGGACATTGCCGCCACCGGATATGGCATCCGCTACGAG
TACGGCATGTTTGCCCAAAAAATTGTCGATGGCTATCAAATAGAAAGACCGGACCGCTGGCTCAAAGAAGGCAACCCCTG
GGAGGTGCGTTTGCACGGACAGGCGGTGATGGTGCCTTTCTTTGGTCATACCCAGTCCTATGTGGACAGGGACGGCCGTC
GTCATATGCAGTGGGTCGGTACCCAGGACGTGGTGGCCGTGCCCCACGATATGCCGGTGCCTGGTTATCGCAATGGCCGC
ATCAATACCCTGAGGCTGTGGAAGGCCGAGGCCACCGATGATTTTGATTTGGAAGAATTCAATCAGGGTGACTATGCCGA
GGCGGTGGCCCGGAAAAATCTGGCCGAACAGATCACCATGGTGCTCTATCCCAACGACGCCAGCGAAAACGGTAAGGAGC
TGAGGCTGCGTCAGCAGTACTTTTTGTCATCCGCCAGCCTGCAGGACTTGCTGCGCCGCCACTGCGCCCGCTTCGGCGAC
AACTTTGCCGATTTCCATCGCCACAATGTGATTCAGCTGAATGACACCCATCCCGCCATTGCCGTGCCCGAACTGATGCG
CCTCCTGCTCGATGTGTATTGTCTGGAGTGGGACGAGGCCTGGCATATCACCAGCCATACCATGGCGTACACCAACCACA
CCCTGCTGCCGGAAGCCCTGGAGTGCTGGAGCGTGCGCATGCTGGGGCACATGCTGCCGCGGGTGCTGGAAATTATTTAT
GAAATCAACGCCCGTTACCTGGATGAAGCGGCCCACCACTGGCCCGGAGACGGCGAGATGCTGGCGCGTATGTCCATCAT
TGAGGAAGGCGCCGAGCCTCGGGTACGCATGGCCTATCTGGCCATAGTGGCGAGCTTTTCGGTAAACGGGGTAGCGGCGC
TTCACACCGAGCTTTTGCGCCGTGGACTCTTTAAAGACTTCCATGCGCTGTGGCCACACAAGTTCAACAACAAGACCAAT
GGCGTCACCCCGAGGCGTTGGCTGATGAATGCCAACCCACGTTTGTCGGCCCTGATTGACCGGCGCCTTGGCAGCGCCTG
GCGCGAAGACTTAAGTCGCCTGGAAAGCCTGAATGCCTTTACCTCAGATTCTGACTTTATCCATGCCTGGCGCGAGGTGA
AGTCGGTCAACAAAGAGGCACTGGCGGCCCTGGTTGAGCGTGAGTGTCATGTGCAGTTTGACACCGCCATGATGTTCGAT
GTGCAGGTGAAGCGCATCCATGAATACAAGCGCCAGCTGCTGAACATTCTGCATGTGATTCATCTCTACCAGCGTATTTT
AAGCGGCGACACCCACGGCATGGTGCCCCGCTGCGTGCTGATTGGTGGCAAGGCGGCGCCCGGATACGCCATGGCCAAAC
TCATTATCAAGCTGGCGGGCAATGTGGCCCACATGGTCAACAGTGACCCCCATGTGACGCCCTGGCTGAGGTTTGCCTTT
TTGCCCAACTACAACGTCAGCGCCATGGAAGTGATAGCACCGGGCACCGACCTGTCCGAGCAAATTTCCACCGCAGGCAA
GGAGGCTTCGGGCACAGGCAATATGAAGTTCATGATGAACGGTGCCCTCACCATAGGCACCCTGGATGGGGCCAATATTG
AAATTCTTGAAGCCGTTGGGCCGGATAACTTCTTCCTCTTTGGCCTCAATGCCGACGAGGTGGCGGCCTTGAAACCCCAC
TATCGCCCCGATGAGTACATTCGCCATTCGGTTGCACTGGAAGGCGTAATCGAACTTATCCGCAGCGGTCATTTCAGCTT
GCAGGAGCCGGGCATCTTCGACCCCATTGTCAGTGCCATCGAAAGCCCATGGGACCAGTGGATGACCGCGGCCGACTTTG
AGTCTTACCTCAGTGCCCAGCATCAGGCGGCGGCGCTTTATGCCAATAAGGACGCCTGGACCCTTTGCAGTATTCGTAAC
ACCGCGGCCAGTGGCCGTTTTTCATCCGACGCCACCATAGCCCGCTACCGGGATGAGATCTGGACCGGTGCCTGA

Upstream 100 bases:

>100_bases
ATAGAGGCGGGCGACACCCTGACGCTACCCGGCGTCAGTATCTGGATTTTTCACGGACACAGGGATGCCGACCCCGGCAC
TCAATAACGGAGACCACACC

Downstream 100 bases:

>100_bases
ATTTGACGCAGCCAAGGAGCCTCTAATGCCCAATCACAGCCCTCGCTTCATCAGTAATCTGACCCGTGAAACCTATGCCC
TGATCCTCGCGGGAGGTCGT

Product: phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 824; Mature: 823

Protein sequence:

>824_residues
MATKRLKAAGPETDTGRPQPCEPCDALPACLERQLRYNLCREESRHQDLFHALAHGVKEQLLDSWRETRKRDAAGQQRQV
AYLSLEFLMGRTLGNALLSLGISDDARKALLPYSVTLEDLESEEHDAGLGNGGLGRLAACFLDSCASMDIAATGYGIRYE
YGMFAQKIVDGYQIERPDRWLKEGNPWEVRLHGQAVMVPFFGHTQSYVDRDGRRHMQWVGTQDVVAVPHDMPVPGYRNGR
INTLRLWKAEATDDFDLEEFNQGDYAEAVARKNLAEQITMVLYPNDASENGKELRLRQQYFLSSASLQDLLRRHCARFGD
NFADFHRHNVIQLNDTHPAIAVPELMRLLLDVYCLEWDEAWHITSHTMAYTNHTLLPEALECWSVRMLGHMLPRVLEIIY
EINARYLDEAAHHWPGDGEMLARMSIIEEGAEPRVRMAYLAIVASFSVNGVAALHTELLRRGLFKDFHALWPHKFNNKTN
GVTPRRWLMNANPRLSALIDRRLGSAWREDLSRLESLNAFTSDSDFIHAWREVKSVNKEALAALVERECHVQFDTAMMFD
VQVKRIHEYKRQLLNILHVIHLYQRILSGDTHGMVPRCVLIGGKAAPGYAMAKLIIKLAGNVAHMVNSDPHVTPWLRFAF
LPNYNVSAMEVIAPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEILEAVGPDNFFLFGLNADEVAALKPH
YRPDEYIRHSVALEGVIELIRSGHFSLQEPGIFDPIVSAIESPWDQWMTAADFESYLSAQHQAAALYANKDAWTLCSIRN
TAASGRFSSDATIARYRDEIWTGA

Sequences:

>Translated_824_residues
MATKRLKAAGPETDTGRPQPCEPCDALPACLERQLRYNLCREESRHQDLFHALAHGVKEQLLDSWRETRKRDAAGQQRQV
AYLSLEFLMGRTLGNALLSLGISDDARKALLPYSVTLEDLESEEHDAGLGNGGLGRLAACFLDSCASMDIAATGYGIRYE
YGMFAQKIVDGYQIERPDRWLKEGNPWEVRLHGQAVMVPFFGHTQSYVDRDGRRHMQWVGTQDVVAVPHDMPVPGYRNGR
INTLRLWKAEATDDFDLEEFNQGDYAEAVARKNLAEQITMVLYPNDASENGKELRLRQQYFLSSASLQDLLRRHCARFGD
NFADFHRHNVIQLNDTHPAIAVPELMRLLLDVYCLEWDEAWHITSHTMAYTNHTLLPEALECWSVRMLGHMLPRVLEIIY
EINARYLDEAAHHWPGDGEMLARMSIIEEGAEPRVRMAYLAIVASFSVNGVAALHTELLRRGLFKDFHALWPHKFNNKTN
GVTPRRWLMNANPRLSALIDRRLGSAWREDLSRLESLNAFTSDSDFIHAWREVKSVNKEALAALVERECHVQFDTAMMFD
VQVKRIHEYKRQLLNILHVIHLYQRILSGDTHGMVPRCVLIGGKAAPGYAMAKLIIKLAGNVAHMVNSDPHVTPWLRFAF
LPNYNVSAMEVIAPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEILEAVGPDNFFLFGLNADEVAALKPH
YRPDEYIRHSVALEGVIELIRSGHFSLQEPGIFDPIVSAIESPWDQWMTAADFESYLSAQHQAAALYANKDAWTLCSIRN
TAASGRFSSDATIARYRDEIWTGA
>Mature_823_residues
ATKRLKAAGPETDTGRPQPCEPCDALPACLERQLRYNLCREESRHQDLFHALAHGVKEQLLDSWRETRKRDAAGQQRQVA
YLSLEFLMGRTLGNALLSLGISDDARKALLPYSVTLEDLESEEHDAGLGNGGLGRLAACFLDSCASMDIAATGYGIRYEY
GMFAQKIVDGYQIERPDRWLKEGNPWEVRLHGQAVMVPFFGHTQSYVDRDGRRHMQWVGTQDVVAVPHDMPVPGYRNGRI
NTLRLWKAEATDDFDLEEFNQGDYAEAVARKNLAEQITMVLYPNDASENGKELRLRQQYFLSSASLQDLLRRHCARFGDN
FADFHRHNVIQLNDTHPAIAVPELMRLLLDVYCLEWDEAWHITSHTMAYTNHTLLPEALECWSVRMLGHMLPRVLEIIYE
INARYLDEAAHHWPGDGEMLARMSIIEEGAEPRVRMAYLAIVASFSVNGVAALHTELLRRGLFKDFHALWPHKFNNKTNG
VTPRRWLMNANPRLSALIDRRLGSAWREDLSRLESLNAFTSDSDFIHAWREVKSVNKEALAALVERECHVQFDTAMMFDV
QVKRIHEYKRQLLNILHVIHLYQRILSGDTHGMVPRCVLIGGKAAPGYAMAKLIIKLAGNVAHMVNSDPHVTPWLRFAFL
PNYNVSAMEVIAPGTDLSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEILEAVGPDNFFLFGLNADEVAALKPHY
RPDEYIRHSVALEGVIELIRSGHFSLQEPGIFDPIVSAIESPWDQWMTAADFESYLSAQHQAAALYANKDAWTLCSIRNT
AASGRFSSDATIARYRDEIWTGA

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI5032009, Length=811, Percent_Identity=50.1849568434032, Blast_Score=761, Evalue=0.0,
Organism=Homo sapiens, GI21361370, Length=801, Percent_Identity=50.6866416978777, Blast_Score=758, Evalue=0.0,
Organism=Homo sapiens, GI71037379, Length=812, Percent_Identity=49.5073891625616, Blast_Score=749, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=693, Percent_Identity=51.3708513708514, Blast_Score=706, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=664, Percent_Identity=51.6566265060241, Blast_Score=672, Evalue=0.0,
Organism=Escherichia coli, GI2367228, Length=807, Percent_Identity=46.7162329615861, Blast_Score=713, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=768, Percent_Identity=46.3541666666667, Blast_Score=686, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=814, Percent_Identity=49.1400491400491, Blast_Score=762, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=814, Percent_Identity=49.1400491400491, Blast_Score=761, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=814, Percent_Identity=46.0687960687961, Blast_Score=675, Evalue=0.0,
Organism=Drosophila melanogaster, GI78706832, Length=801, Percent_Identity=49.438202247191, Blast_Score=745, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=801, Percent_Identity=49.438202247191, Blast_Score=745, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 92954; Mature: 92822

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKRLKAAGPETDTGRPQPCEPCDALPACLERQLRYNLCREESRHQDLFHALAHGVKEQ
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDSWRETRKRDAAGQQRQVAYLSLEFLMGRTLGNALLSLGISDDARKALLPYSVTLEDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEHHHH
ESEEHDAGLGNGGLGRLAACFLDSCASMDIAATGYGIRYEYGMFAQKIVDGYQIERPDRW
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHCCCCCCCCHHH
LKEGNPWEVRLHGQAVMVPFFGHTQSYVDRDGRRHMQWVGTQDVVAVPHDMPVPGYRNGR
HHCCCCEEEEECCCEEEEEECCCCHHHHHCCCHHHHHCCCCCCEEECCCCCCCCCCCCCC
INTLRLWKAEATDDFDLEEFNQGDYAEAVARKNLAEQITMVLYPNDASENGKELRLRQQY
EEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHH
FLSSASLQDLLRRHCARFGDNFADFHRHNVIQLNDTHPAIAVPELMRLLLDVYCLEWDEA
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCC
WHITSHTMAYTNHTLLPEALECWSVRMLGHMLPRVLEIIYEINARYLDEAAHHWPGDGEM
EEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LARMSIIEEGAEPRVRMAYLAIVASFSVNGVAALHTELLRRGLFKDFHALWPHKFNNKTN
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GVTPRRWLMNANPRLSALIDRRLGSAWREDLSRLESLNAFTSDSDFIHAWREVKSVNKEA
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHH
LAALVERECHVQFDTAMMFDVQVKRIHEYKRQLLNILHVIHLYQRILSGDTHGMVPRCVL
HHHHHHHHHCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
IGGKAAPGYAMAKLIIKLAGNVAHMVNSDPHVTPWLRFAFLPNYNVSAMEVIAPGTDLSE
ECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHEEECCCCCCCEEEEECCCCCHHH
QISTAGKEASGTGNMKFMMNGALTIGTLDGANIEILEAVGPDNFFLFGLNADEVAALKPH
HHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHCCCC
YRPDEYIRHSVALEGVIELIRSGHFSLQEPGIFDPIVSAIESPWDQWMTAADFESYLSAQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HQAAALYANKDAWTLCSIRNTAASGRFSSDATIARYRDEIWTGA
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ATKRLKAAGPETDTGRPQPCEPCDALPACLERQLRYNLCREESRHQDLFHALAHGVKEQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLDSWRETRKRDAAGQQRQVAYLSLEFLMGRTLGNALLSLGISDDARKALLPYSVTLEDL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEHHHH
ESEEHDAGLGNGGLGRLAACFLDSCASMDIAATGYGIRYEYGMFAQKIVDGYQIERPDRW
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHHHCCCCCCCCHHH
LKEGNPWEVRLHGQAVMVPFFGHTQSYVDRDGRRHMQWVGTQDVVAVPHDMPVPGYRNGR
HHCCCCEEEEECCCEEEEEECCCCHHHHHCCCHHHHHCCCCCCEEECCCCCCCCCCCCCC
INTLRLWKAEATDDFDLEEFNQGDYAEAVARKNLAEQITMVLYPNDASENGKELRLRQQY
EEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHH
FLSSASLQDLLRRHCARFGDNFADFHRHNVIQLNDTHPAIAVPELMRLLLDVYCLEWDEA
HHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCC
WHITSHTMAYTNHTLLPEALECWSVRMLGHMLPRVLEIIYEINARYLDEAAHHWPGDGEM
EEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LARMSIIEEGAEPRVRMAYLAIVASFSVNGVAALHTELLRRGLFKDFHALWPHKFNNKTN
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GVTPRRWLMNANPRLSALIDRRLGSAWREDLSRLESLNAFTSDSDFIHAWREVKSVNKEA
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHH
LAALVERECHVQFDTAMMFDVQVKRIHEYKRQLLNILHVIHLYQRILSGDTHGMVPRCVL
HHHHHHHHHCEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
IGGKAAPGYAMAKLIIKLAGNVAHMVNSDPHVTPWLRFAFLPNYNVSAMEVIAPGTDLSE
ECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHEEECCCCCCCEEEEECCCCCHHH
QISTAGKEASGTGNMKFMMNGALTIGTLDGANIEILEAVGPDNFFLFGLNADEVAALKPH
HHHHCCCCCCCCCCEEEEEECCEEEEECCCCCEEEEEECCCCCEEEEECCCCCHHHCCCC
YRPDEYIRHSVALEGVIELIRSGHFSLQEPGIFDPIVSAIESPWDQWMTAADFESYLSAQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
HQAAALYANKDAWTLCSIRNTAASGRFSSDATIARYRDEIWTGA
HHHHEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]