| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is aprN [H]
Identifier: 119775547
GI number: 119775547
Start: 2899885
End: 2901465
Strand: Reverse
Name: aprN [H]
Synonym: Sama_2413
Alternate gene names: 119775547
Gene position: 2901465-2899885 (Counterclockwise)
Preceding gene: 119775549
Following gene: 119775546
Centisome position: 67.38
GC content: 56.93
Gene sequence:
>1581_bases ATGCATTCAACCAAGTTGTCTTTGTCTTCACTGCTGGTTTGCGTATTGTCTGGCATAAGTCTGGGCGTAACCGCTGCGGC GTCGAATGAAGAGTCCCGCGTTATTGTGAAGTTTAAATCTGGGATGGGACCCCAAGCCAAAGCCAGTATCCGTGCGGCGG GAGGCACTTTGATGTTGGACCTCTCACGCCACGATGCCGCCGCTTTTTTACTGCCTGCCAGCGCTGTACAAGGGCTGTCG CATCACCCTCTTATCGAGTATCTCGAAGCCGATGTGCTGCGTTACCCCCTGTCACAATCCGAGCCTTATGGCATTGCCAT GGTACAGGCCAATTTGTTGTTGCCTGGGGTTAATAGTGCAGCCAACCGCACTGTGTGCATCATAGACTCGGGCATCGACA TGGGGCATGAAGATCTCCCCAACAATCGACTCACCGGCACCTATGATGCTGGAACCGGTGATTGGGGCAGCGATGAAAAT CACCACGGCACCCATGTGGCGGGCACCATAGCCGCGGTGAATAATGACCTTGGGGTGATAGGGGTGCATTCAGGCAGTGC CCTGAATCTGCATATCATTAAAGTCTTTGACGCCAATGGCTGGGCGTACTCTTCAAGTTTGGTGGCCGCACTCGATAAGT GCATCGACGCCGGTGCCAATGTCATCAATATGAGTTTGGGCGGTCCCCTTAAAAGCCGCACCGAAGACAGGGCATTCGCA GACGCCGAGACCCTGGGAGTACTCAGCGTGGCAGCTGCCGGAAACGACGGCAACACGCGGCATTCCTATCCGGCTTCCTA CAATGCCGTGGTTTCGGTTGCGGCCCTCGATGAAAACAAGCAGGTTGCGGATTTTTCCCAGCGTACCAGTCAGGTGGAGT TGTCGGCGCCGGGCGTAGGCGTGCTTTCTACCCTGCCCATGGGGCAGGCAGAAGTGGCCAGTGTGTCTGCCGGTGCCAGC GATTTTGAAGCCAACGCCATGGAGGGCAGCCCCTATGGAAGCGAGACTGCCATGCTTGCCGACTGCGGGTTTGGCGACAA TATCTGCAACGCATCAGGGCAGCTTTGCCTGATCAGTCGCGGGAATATCAGCTTTGCCGACAAGGTACAGAACTGCGCCG CAGGCGGTGGTGTTGGCGCCATCATCTATAACAATGTCGCAGGCGATCTCTATGGGACCCTTGGAGGCGTTAACACCACA ATTCCTTCTGTTGGGGTGTCGGATACCACAGGTGCTGCCTTGCAGCAGACCACGGGTCAGGTTGCCACCCTCAATGTGGC ACAGGGAAACTATGCCAGGTTCAGTGGCACCTCCATGGCAACGCCTCACGTTGCCGGTGTCGCAGCGCTGGTTTGGGGGC TGCACACCAATTGCAGCAACACAGAAATCCGCTCGGCGTTAAGGGCTACAGCAGAAGACTTGGGGCCAACAGGACGGGAT GACGCATACGGGTATGGTTTGGTTCGCGCTTTGGCGGCACATGACTACCTGATTGCCCACCCGTGCACCGGTGGCCAGGG AACTGGCGGAGGCTCGGGCACCGGTGGCAGCTGCAAGGGGAAAAACAAGCAATGTAACTGA
Upstream 100 bases:
>100_bases TGCCTATAAGTGAAGTTATAGCCTGTGTGAAAGTGTGGACGTTGAGGGTGGTTAAGGGAATGACACGGGCAGGGCATCAA CAGATTCACGGGAGCAGGGC
Downstream 100 bases:
>100_bases TAGCCATCTTGCTGCATCAGTCTGCCCTGCGGGTTGCAACAGCACCATGGCTACTCCTTCTCCACATTGCGCGTGGCCCT TTGGCCACGCGTTTTTTATT
Product: cold-active alkaline serine protease
Products: NA
Alternate protein names: Nattokinase [H]
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MHSTKLSLSSLLVCVLSGISLGVTAAASNEESRVIVKFKSGMGPQAKASIRAAGGTLMLDLSRHDAAAFLLPASAVQGLS HHPLIEYLEADVLRYPLSQSEPYGIAMVQANLLLPGVNSAANRTVCIIDSGIDMGHEDLPNNRLTGTYDAGTGDWGSDEN HHGTHVAGTIAAVNNDLGVIGVHSGSALNLHIIKVFDANGWAYSSSLVAALDKCIDAGANVINMSLGGPLKSRTEDRAFA DAETLGVLSVAAAGNDGNTRHSYPASYNAVVSVAALDENKQVADFSQRTSQVELSAPGVGVLSTLPMGQAEVASVSAGAS DFEANAMEGSPYGSETAMLADCGFGDNICNASGQLCLISRGNISFADKVQNCAAGGGVGAIIYNNVAGDLYGTLGGVNTT IPSVGVSDTTGAALQQTTGQVATLNVAQGNYARFSGTSMATPHVAGVAALVWGLHTNCSNTEIRSALRATAEDLGPTGRD DAYGYGLVRALAAHDYLIAHPCTGGQGTGGGSGTGGSCKGKNKQCN
Sequences:
>Translated_526_residues MHSTKLSLSSLLVCVLSGISLGVTAAASNEESRVIVKFKSGMGPQAKASIRAAGGTLMLDLSRHDAAAFLLPASAVQGLS HHPLIEYLEADVLRYPLSQSEPYGIAMVQANLLLPGVNSAANRTVCIIDSGIDMGHEDLPNNRLTGTYDAGTGDWGSDEN HHGTHVAGTIAAVNNDLGVIGVHSGSALNLHIIKVFDANGWAYSSSLVAALDKCIDAGANVINMSLGGPLKSRTEDRAFA DAETLGVLSVAAAGNDGNTRHSYPASYNAVVSVAALDENKQVADFSQRTSQVELSAPGVGVLSTLPMGQAEVASVSAGAS DFEANAMEGSPYGSETAMLADCGFGDNICNASGQLCLISRGNISFADKVQNCAAGGGVGAIIYNNVAGDLYGTLGGVNTT IPSVGVSDTTGAALQQTTGQVATLNVAQGNYARFSGTSMATPHVAGVAALVWGLHTNCSNTEIRSALRATAEDLGPTGRD DAYGYGLVRALAAHDYLIAHPCTGGQGTGGGSGTGGSCKGKNKQCN >Mature_526_residues MHSTKLSLSSLLVCVLSGISLGVTAAASNEESRVIVKFKSGMGPQAKASIRAAGGTLMLDLSRHDAAAFLLPASAVQGLS HHPLIEYLEADVLRYPLSQSEPYGIAMVQANLLLPGVNSAANRTVCIIDSGIDMGHEDLPNNRLTGTYDAGTGDWGSDEN HHGTHVAGTIAAVNNDLGVIGVHSGSALNLHIIKVFDANGWAYSSSLVAALDKCIDAGANVINMSLGGPLKSRTEDRAFA DAETLGVLSVAAAGNDGNTRHSYPASYNAVVSVAALDENKQVADFSQRTSQVELSAPGVGVLSTLPMGQAEVASVSAGAS DFEANAMEGSPYGSETAMLADCGFGDNICNASGQLCLISRGNISFADKVQNCAAGGGVGAIIYNNVAGDLYGTLGGVNTT IPSVGVSDTTGAALQQTTGQVATLNVAQGNYARFSGTSMATPHVAGVAALVWGLHTNCSNTEIRSALRATAEDLGPTGRD DAYGYGLVRALAAHDYLIAHPCTGGQGTGGGSGTGGSCKGKNKQCN
Specific function: Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides. Subtilisin NAT also has fibrinolytic activity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320775, Length=257, Percent_Identity=28.0155642023346, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 - InterPro: IPR010259 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF00082 Peptidase_S8 [H]
EC number: =3.4.21.62 [H]
Molecular weight: Translated: 53486; Mature: 53486
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSTKLSLSSLLVCVLSGISLGVTAAASNEESRVIVKFKSGMGPQAKASIRAAGGTLMLD CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEE LSRHDAAAFLLPASAVQGLSHHPLIEYLEADVLRYPLSQSEPYGIAMVQANLLLPGVNSA ECCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCC ANRTVCIIDSGIDMGHEDLPNNRLTGTYDAGTGDWGSDENHHGTHVAGTIAAVNNDLGVI CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEE GVHSGSALNLHIIKVFDANGWAYSSSLVAALDKCIDAGANVINMSLGGPLKSRTEDRAFA EECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH DAETLGVLSVAAAGNDGNTRHSYPASYNAVVSVAALDENKQVADFSQRTSQVELSAPGVG CHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCC VLSTLPMGQAEVASVSAGASDFEANAMEGSPYGSETAMLADCGFGDNICNASGQLCLISR HHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEC GNISFADKVQNCAAGGGVGAIIYNNVAGDLYGTLGGVNTTIPSVGVSDTTGAALQQTTGQ CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC VATLNVAQGNYARFSGTSMATPHVAGVAALVWGLHTNCSNTEIRSALRATAEDLGPTGRD EEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC DAYGYGLVRALAAHDYLIAHPCTGGQGTGGGSGTGGSCKGKNKQCN CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHSTKLSLSSLLVCVLSGISLGVTAAASNEESRVIVKFKSGMGPQAKASIRAAGGTLMLD CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEE LSRHDAAAFLLPASAVQGLSHHPLIEYLEADVLRYPLSQSEPYGIAMVQANLLLPGVNSA ECCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCC ANRTVCIIDSGIDMGHEDLPNNRLTGTYDAGTGDWGSDENHHGTHVAGTIAAVNNDLGVI CCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEE GVHSGSALNLHIIKVFDANGWAYSSSLVAALDKCIDAGANVINMSLGGPLKSRTEDRAFA EECCCCEEEEEEEEEEECCCCEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH DAETLGVLSVAAAGNDGNTRHSYPASYNAVVSVAALDENKQVADFSQRTSQVELSAPGVG CHHHHCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHCCEEEECCCCCC VLSTLPMGQAEVASVSAGASDFEANAMEGSPYGSETAMLADCGFGDNICNASGQLCLISR HHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEC GNISFADKVQNCAAGGGVGAIIYNNVAGDLYGTLGGVNTTIPSVGVSDTTGAALQQTTGQ CCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCC VATLNVAQGNYARFSGTSMATPHVAGVAALVWGLHTNCSNTEIRSALRATAEDLGPTGRD EEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC DAYGYGLVRALAAHDYLIAHPCTGGQGTGGGSGTGGSCKGKNKQCN CCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1369081 [H]